mRNA_L-elsbetiae_contig5475.13740.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5475.13740.1 vs. uniprot
Match: D7G850_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G850_ECTSI) HSP 1 Score: 804 bits (2077), Expect = 9.060e-284 Identity = 471/707 (66.62%), Postives = 530/707 (74.96%), Query Frame = 1
Query: 1 QGMASESDVIILSCLTKPPATAAATAAVRSALQRVIVRTPSATICNSGPGGLAXXXXXXXXXVAAPNLRAIFPSAHSAVVDSSLLRAFTVTRARTILAGLSTPTAGGRVRELPTVVAGVAAGPAGLCFLGQRVTSEGFSAFSIRRESESEGGERGAEVAAVAAAGG--QALRIDDLIHDFGSHAQASARALYDLWGTSNGDVLAAALQDGGTSDPFARLATEWDCSSHATRTLGSPPPPACSSLLLIGGECPPSPVSLALRASIETLSSAAAMGQSATPQARRKANGPFGGGVGSSAGVDTPASGSCGDASLEAERQEQLRWREELQALLSGSENMAELAARPGGGTARAGDGNSDDGSEASQGVEEDTAVQERKDGGGLGEEESGPGRQEPAEKLRGDLDFSERLWELTARATDVESVRSAVSSAFDAVGDGQIFPVISRDNKTAAGSHIRDGVALAREARYRDGTSVGVGMRRDEAKAKAWRERGAAMLADTETLARAFVELGVHKVSRDLLHGLEVHAGVLAADVNRVLP-----AAASDRPSSGDGXXXXXXXXXXDRRLDRLLTLADTLDLVALAQSYGAPWRQLAHPVFWELYLEPTRGNGVGSSTASGLETVSYTIANAGLFQLKGVDEPPMLSGEAARAAQAALRGVAEHLIPEVLSSVTGVESFGELKRRQLDLRTKGASTRDDAAVVFVCDHRFTPW 2100
+GMASESDVIILSCLTK PA A +AVRSALQ V+VR PS T + GPGG A AP LRAI PS++SAVVDS+LLRAFT TRAR ILAGL+ P AGG R LPTVVAGV+ P GLCFLGQR T EG S+FS RR+SE E AAGG QALRIDDL+ ++G A ASARALYDLWG S+GD L LQ+G S+PFARLATEWDCS+HATRTLGS PPPACSSLLLIGGECPP+ VS +R +IE L +A G +A QARRKA GPFGG G + + G+ AS + E QE+ RW E+LQALLSGSENMAE AA+P G G SDD EA + EEDTAVQ+R DGGG+GEEE G G QE EK+RGDLDFSERLWEL ARATDVE VRSAV+ AFDAVG+GQ+FPVISRD+KTA G HIRDGVA+AREARY+DGTS +G DEAKA+AWRERG+A+LAD ++LA AFVELGVHKV+RDLLH LE +AGVLAADV+R LP AAA DRP+ G G DRRLDRLLTLADTLDLVALAQSYGAPWRQLAHPVFWELYLEP G+GVG + +ETVSYT+ANAGLFQL G+DEPP LSGEAARAAQAAL G LIPEVLSSVTG ESF ELKRR L+ + KGA+ DA VFVC+H F PW
Sbjct: 70 KGMASESDVIILSCLTKAPAAGEAASAVRSALQHVVVRPPSVTTHSPGPGGRAAAAGGVG---VAPTLRAISPSSYSAVVDSNLLRAFTATRARMILAGLTPPPAGGESRTLPTVVAGVSGAPGGLCFLGQRATPEGHSSFSFRRDSEQE------------AAGGRAQALRIDDLVREYGGRAHASARALYDLWGDSSGDFLGECLQEGAKSNPFARLATEWDCSTHATRTLGSAPPPACSSLLLIGGECPPTTVSAKIRGNIEALKTAVERG-AAPQQARRKAKGPFGGEKGGTGRAEAHPGGAS--ASGDGEEQERRRWDEDLQALLSGSENMAEFAAKPV--DVPVGGGGSDDTLEAGR-AEEDTAVQDRTDGGGVGEEEVGSGMQEVPEKVRGDLDFSERLWELAARATDVEGVRSAVALAFDAVGEGQMFPVISRDSKTAVGCHIRDGVAMAREARYQDGTSGCLG---DEAKAEAWRERGSALLADEDSLASAFVELGVHKVTRDLLHWLEAYAGVLAADVDRALPDTAAAAAAGDRPAPGTGGSAAG-----DRRLDRLLTLADTLDLVALAQSYGAPWRQLAHPVFWELYLEPAGGSGVGGA----METVSYTLANAGLFQLSGLDEPPALSGEAARAAQAALSGCPARLIPEVLSSVTGAESFVELKRRLLEHKAKGATVGGDA--VFVCEHSFIPW 741
BLAST of mRNA_L-elsbetiae_contig5475.13740.1 vs. uniprot
Match: A0A6H5L254_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L254_9PHAE) HSP 1 Score: 761 bits (1965), Expect = 2.970e-263 Identity = 461/749 (61.55%), Postives = 517/749 (69.03%), Query Frame = 1
Query: 1 QGMASESDVIILSCLTKPPATAAATAAVRSALQRVIVRTPSATICNSGPGGLAXXXXXXXXXVAAPNLRAIFPSAHSAVVDSSLLRAFTVTRARTILAGLSTPTAGGRVRELPTVVAGVAAGPAGLCFLGQRVTSEGFSAFSIRRESESEGGERGAEVAAVAAAGG--QALRIDDLIHDFGSHAQASARALYDLWGTSNGDVLAAALQDGGTSDPFARLATEWDCSSHATRTLGSPPPPACSSLLLIGGECPPSPVSLALRASIETLSSAAAMGQSATPQARRKANGPFGGGVGSSAGVDTPASGSCGDASLEAERQEQLRWREELQALLSGSENMAELAARPGGGTARAGDGNSDDGSEASQGVEEDTAVQERKDGGGLGEEESGPGRQEPAEKLRGDLDFSERLWELTARATDVESVRSAVSSAFDAVGDGQIFPVISRDNKTAAGSHIRDGVALAREARYRDGTSVGVGMRRDEAKAKAWRERGAAMLADTETLARAFVELGVHKVSRDLLHGLEVHAGVLAADVNRVLPAAAS----DRPSSGDGXXXXXXXXXXDRRLDRLLTLADTLDLVALAQSYGAPWRQ-------------------------------------------LAHPVFWELYLEPTRGNGVGSSTASGLETVSYTIANAGLFQLKGVDEPPMLSGEAARAAQAALRGVAEHLIPEVLSSVTGVESFGELKRRQLDLRTKGASTRDDAAVVFVCDHRFTPW 2100
+GMASESDVIILSCLTK P A +AVRSALQ V+VR PS T + GPGG A AP LRAI PS++SAVVDS+LLRAFT TRAR ILAGL+ P A G R LPTVV GV+ P GLCFLGQR T EG S+FS RR+SE E AAGG QALRIDDL+ ++G A ASARALYDLWG S+GD L LQ+G PFARLATEWDCS+HATRTLGS PPPACSSLLLIGGECPP+ VS +R I+ L +A G A Q RRK GPFGGG G + + G+C A + E QE+ RW E+LQALLSGSENMAE AA+P G G SDD EA + EEDTAVQ+R DGGGLGEEE G G QE EK+RGDLDFSERLWEL ARATDV+ VRSAV+ AF+AVG+GQIFPVISRD+KTA G HIRDGVA+AREARY+DGTS +G DEAKA+AWRERG+A+LAD + LA FVELGVHKV+RDLLH LE +AGVLAADV+R LPAAA+ D+P+ G G DRRLDRLLTLADTLDLVALAQSYGAPWRQ LAHPVFWELYLEP G+GVG + +ETVSYT+ANAGLFQL +DEPP LSGEAARAAQAAL LIPEVLSSVTG ESF ELKRR L + GAS DA VFVC+H F PW
Sbjct: 70 KGMASESDVIILSCLTKAPTAGEAASAVRSALQHVVVRPPSVTTHSPGPGGRAAAAGGVG---VAPALRAISPSSYSAVVDSNLLRAFTATRARMILAGLTPPPAEGESRTLPTVVVGVSGAPDGLCFLGQRATPEGHSSFSFRRDSEQE------------AAGGRAQALRIDDLVREYGGRAHASARALYDLWGDSSGDFLGECLQEGAKLSPFARLATEWDCSTHATRTLGSAPPPACSSLLLIGGECPPTTVSAKIRGDIDVLKTAVERGV-APQQTRRKTKGPFGGGRGDTGRDEALPGGTC--APGDGEEQERRRWDEDLQALLSGSENMAEFAAKPV--DVPVGGGGSDDALEAGR-AEEDTAVQDRTDGGGLGEEEVGSGMQEVPEKVRGDLDFSERLWELAARATDVKGVRSAVALAFNAVGEGQIFPVISRDSKTAVGCHIRDGVAMAREARYQDGTSACLG---DEAKAEAWRERGSALLADEDALASVFVELGVHKVTRDLLHWLEAYAGVLAADVDRALPAAAAAAVGDKPAPGTGGSAAR-----DRRLDRLLTLADTLDLVALAQSYGAPWRQVRSLALSGLTALQRPPVAGPPPSSSPVFSLGLPKPIPPCARCKLAHPVFWELYLEPAGGSGVGGA----METVSYTLANAGLFQLSRLDEPPALSGEAARAAQAALSDCPARLIPEVLSSVTGAESFVELKRRLLMHKANGASVAGDA--VFVCEHSFIPW 783
BLAST of mRNA_L-elsbetiae_contig5475.13740.1 vs. uniprot
Match: A0A836C9H3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9H3_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 1.990e-10 Identity = 108/398 (27.14%), Postives = 151/398 (37.94%), Query Frame = 1
Query: 619 DGGTSD-PFARLATEWDCSSHATRTLGSPPPPACSSLLLIGGECPPSPVSLALRASIETLSSAAAMGQSATPQARRKANGPFGGGVGSSAGVDTPASGSCGDASLEAERQEQLRWREELQALLSGSENMAELAARPGGGTARAGDGNSDDGSEASQGVEEDTAVQERKDGGGLGEEESGPGRQEPAEKL--RGDLDFSERLWELTARATDVESVRSAVSSAFDAVGDGQIFPVISRDNKTAAGSHIRDGVALAREARYRDGTSVGVGMRRDEAKAKAWRERGAAMLAD------TETLARAFVELGVHKVSRDLLHGLEVHAGVLAADVNRVLPAAASDRPSSGDGXXXXXXXXXXDRRLD-------------RLLTLADTLDLVALAQSYGAPWRQ 1746
+G +D P L EWDC+ R +G PP C S L++GG RA + SA T +G EQ W+ LQ LLS S + A L+ G + A +G+S A QG ++ + D G R K+ RGDLDFSERLWE+ A E + +A++ A AV G + P I N TA I + A+E +Y G S + ++A AA L + TE A VELG+HKV+ D+ H + A + D++ L GD R+ RL AD ++V LA + APW+Q
Sbjct: 559 EGAAADAPTGALLCEWDCAGGRHRGVGDGPPATCRSQLIVGG-----------RAML-------------------------------SAACHTFRAG------------EQPPWQGHLQQLLSASADEAALSTF--GDESAADNGSS--AVTAGQGPDDSMLLDATLD--------IGFSRSAAPTKIAVRGDLDFSERLWEVAANMATGEEMAAALTQAAAAVRAGSLLPAIGTHNTTAVAGAIAACLRRAQEQQY-GGRSQAATLSSKRSEAAVLDAGPAAALLEGRPPSATEAAA-LLVELGLHKVANDMRHWFTLEAALSTGDLHWHLNCHVGAVDDVGDVEEHWRSPLAPHYRVXXXXXXXXXXQAIRRLSLAADAAEVVTLAAACSAPWQQ 888
BLAST of mRNA_L-elsbetiae_contig5475.13740.1 vs. uniprot
Match: A0A7S3YDZ2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YDZ2_HETAK) HSP 1 Score: 63.9 bits (154), Expect = 6.890e-9 Identity = 29/67 (43.28%), Postives = 41/67 (61.19%), Query Frame = 1
Query: 1183 RGDLDFSERLWELTARATDVESVRSAVSSAFDAVGDGQIFPVISRDNKTAAGSHIRDGVALAREARY 1383
R DLDF+E+LW++ E V F A+ +G IFPVI RDN TA G ++R+G+ +A+ RY
Sbjct: 17 RKDLDFTEQLWDVLCLCNTQEDVEGVFEETFQALQNGLIFPVIGRDNNTALGMYLREGLRIAQATRY 83 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5475.13740.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5475.13740.1 >prot_L-elsbetiae_contig5475.13740.1 ID=prot_L-elsbetiae_contig5475.13740.1|Name=mRNA_L-elsbetiae_contig5475.13740.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=699bp MASESDVIILSCLTKPPATAAATAAVRSALQRVIVRTPSATICNSGPGGLback to top mRNA from alignment at L-elsbetiae_contig5475:9782..12028- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5475.13740.1 ID=mRNA_L-elsbetiae_contig5475.13740.1|Name=mRNA_L-elsbetiae_contig5475.13740.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2247bp|location=Sequence derived from alignment at L-elsbetiae_contig5475:9782..12028- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5475:9782..12028- >mRNA_L-elsbetiae_contig5475.13740.1 ID=mRNA_L-elsbetiae_contig5475.13740.1|Name=mRNA_L-elsbetiae_contig5475.13740.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4194bp|location=Sequence derived from alignment at L-elsbetiae_contig5475:9782..12028- (Laminarionema elsbetiae ELsaHSoW15)back to top |