prot_L-elsbetiae_contig547.13729.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig547.13729.1
Unique Nameprot_L-elsbetiae_contig547.13729.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length258
Homology
BLAST of mRNA_L-elsbetiae_contig547.13729.1 vs. uniprot
Match: A0A6H5JJY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJY6_9PHAE)

HSP 1 Score: 174 bits (442), Expect = 5.290e-46
Identity = 111/263 (42.21%), Postives = 153/263 (58.17%), Query Frame = 0
Query:    1 MDFSTIRCKLMSGSYGSLRDLKLDVQLLCDNAQKFNSSESIYGTAARKIQEGADQVWPQAEDLLAGVMAIEAEARQHGIVGPASRPEAWPLDGHYTIFEVTPANEDAHGMHIAMRCAAAGTRARVAEVAGG-------------------NKDETA-----IDAAVRVAESVASSPVLLYTSGEILTEEEEILLECWLEAKSAKSETALSESDGSAKCRPMDLQSCDAMKKHSRVPATLVTPQFVSPDGQFLDQSAADKLVLS 239
            +DFSTIR +     YGS+ +L LDVQLLC NA+ FN   +IY   A  + +GA+++WPQA+ LL  + + E EA +H I+GPA+  +AWPLDG +  FE+TPANEDA+ MH+A+R A+A                               ++ E A     ++AAV VA +VASSP LLYT GEI  EEE  L E     ++  ++ AL    GSAKC P+DL +    + ++    TL+T QF +PDG+FL QS  D+LV S
Sbjct: 1614 IDFSTIRRRSQWELYGSIHELALDVQLLCANARTFNGPGTIYHEEATNVLKGAERIWPQAQALLDRLTSAETEASRHNIMGPAASSDAWPLDGPFAGFELTPANEDAYYMHVAIRRASAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEGELAARRGRVEAAVEVAVAVASSPALLYTRGEI-GEEESALRESLSLYRTDCTDKALRRPVGSAKCEPIDLPTLHKRRAYTLPMPTLMTRQFAAPDGEFLAQSPEDQLVPS 1875          
BLAST of mRNA_L-elsbetiae_contig547.13729.1 vs. uniprot
Match: D7FHY8_ECTSI (Trithorax 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHY8_ECTSI)

HSP 1 Score: 172 bits (436), Expect = 3.390e-45
Identity = 108/255 (42.35%), Postives = 149/255 (58.43%), Query Frame = 0
Query:    1 MDFSTIRCKLMSGSYGSLRDLKLDVQLLCDNAQKFNSSESIYGTAARKIQEGADQVWPQAEDLLAGVMAIEAEARQHGIVGPASRPEAWPLDGHYTIFEVTPANEDAHGMHIAMRCAAAGTRARVAEVAGG-------------------NKDETA-----IDAAVRVAESVASSPVLLYTSGEILTEEEEILLECWLEAKSAKSETALSESDGSAKCRPMDLQSCDAMKKHSRVPATLVTPQFVSPDGQFLDQS 231
            +DFSTIR +     YGS+ +L LDVQLLC NA+ FN   +IY   A  + +GA+++WPQA+ LL  + + E +A QH I+GPA+  +AWPLDG +   E+TPANEDA+ MH+A+R A+A  RAR                          ++ E A     ++AAV VA +VASSP LLYT GE + EEE  L E     ++  ++ AL    GSAKC P+DL +    + ++    T VT QF +PDG+FL QS
Sbjct: 1774 IDFSTIRRRSQWELYGSIHELALDVQLLCANARTFNGPGTIYHKEATNVLKGAERIWPQAQALLDRLASAETKASQHNIMGPAASSDAWPLDGPFAGLELTPANEDAYYMHVAIRRASAAARARAEXXXXXXXXXXXXXXXXXXXXXXXXSEGELAARRGRVEAAVEVAVAVASSPALLYTRGE-MGEEESALRESLSLYRTDCTDKALRRPVGSAKCEPIDLPTLHKRRAYTLPMPTPVTRQFAAPDGEFLAQS 2027          
BLAST of mRNA_L-elsbetiae_contig547.13729.1 vs. uniprot
Match: A0A6H5L4S9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4S9_9PHAE)

HSP 1 Score: 150 bits (378), Expect = 1.850e-37
Identity = 89/190 (46.84%), Postives = 118/190 (62.11%), Query Frame = 0
Query:    1 MDFSTIRCKLMSGSYGSLRDLKLDVQLLCDNAQKFNSSESIYGTAARKIQEGADQVWPQAEDLLAGVMAIEAEARQHGIVGPASRPEAWPLDGHYTIFEVTPANEDAHGMHIAMRCAAAGTRARVAE--------VAGGNKDETAIDAA-----------VRVAESVASSPVLLYTSGEILTEEEEILLE 171
            +DFSTIR +L    YGS+  L LDVQLLC NA+ FN   ++Y TAA  + +GA+++WPQA+ LL  + + E EA +H I+GPA+  +AWPLDG +  FE+TPANEDA+ MH+A+R A+A  RAR  +        V+GG K   A   A           V VA +VASSP LLYT   ++ EEE  L E
Sbjct: 1199 IDFSTIRRRLQWEVYGSIHQLALDVQLLCANARTFNDPGTVYHTAAGDVLKGAERIWPQAQALLDRLTSAETEASRHNIMGPAASSDAWPLDGPFAGFELTPANEDAYYMHVAIRRASAAARARAEQETGEQETGVSGGXKKRRADGGAGGRRGRVKATAVEVAVAVASSPALLYTR-RVIGEEESALRE 1387          
BLAST of mRNA_L-elsbetiae_contig547.13729.1 vs. uniprot
Match: D7FI07_ECTSI (GF22528 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI07_ECTSI)

HSP 1 Score: 141 bits (356), Expect = 1.580e-34
Identity = 92/249 (36.95%), Postives = 131/249 (52.61%), Query Frame = 0
Query:    1 MDFSTIRCKLMSGSYGSLRDLKLDVQLLCDNAQKFNSSESIYGTAARKIQEGADQVWPQAEDLLAGVMAIEAEARQHGIVGPASRPEAWPLDGHYTIFEVTPANEDAHGMHIAMRCAAAGTRARVAEVAGGNKDETAIDAAVRVAESV------------------ASSPVLLYTSGEILTEEEEILLECWLEAKSAKSETALSESDGSAKCRPMDLQSCDAMKKHSRVPATLVTPQFVSPDGQFLDQS 231
            +DFSTIR +     YGS+  L LDVQLLC NA+ FN   ++Y TAA  + +GA+++WPQA+ LL  + + E +A +H I+GPA+  +AWPLDG +  FE+TPANEDA+ MH+A+R A+A                                               ASSP LLYT   ++ EEE  L E     ++  ++ AL  +  SAKC  +DL +    K ++    T VT QF +PDG+ L  +
Sbjct: 1045 IDFSTIRRRSQWELYGSIHQLALDVQLLCANARTFNDPGTVYHTAAGDVLKGAERIWPQAQALLDRLTSAETKASRHNIMGPAASSDAWPLDGPFAGFELTPANEDAYYMHVAIRRASAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASSPALLYTR-RVIGEEESALRESLSLYRADCTDKALRRTVESAKCEAIDLTTLHKRKAYTLPLPTPVTRQFAAPDGELLSHT 1292          
BLAST of mRNA_L-elsbetiae_contig547.13729.1 vs. uniprot
Match: A0A2C9WB92_MANES (Bromo domain-containing protein n=1 Tax=Manihot esculenta TaxID=3983 RepID=A0A2C9WB92_MANES)

HSP 1 Score: 61.6 bits (148), Expect = 1.610e-7
Identity = 30/57 (52.63%), Postives = 38/57 (66.67%), Query Frame = 0
Query:    1 MDFSTIRCKLMSGSYGSLRDLKLDVQLLCDNAQKFNSSESIYGTAARKIQEGADQVW 57
            MDF T+R KL  G Y SL   + DV L+C NA KFNSS ++Y TAAR I E A +++
Sbjct:  139 MDFGTMRAKLQEGLYTSLEQFERDVFLICSNAMKFNSSTTVYYTAARVINEVAQRLF 195          
BLAST of mRNA_L-elsbetiae_contig547.13729.1 vs. uniprot
Match: UPI000B5D376C (flocculation protein FLO11 n=1 Tax=Manihot esculenta TaxID=3983 RepID=UPI000B5D376C)

HSP 1 Score: 61.6 bits (148), Expect = 3.710e-7
Identity = 30/57 (52.63%), Postives = 38/57 (66.67%), Query Frame = 0
Query:    1 MDFSTIRCKLMSGSYGSLRDLKLDVQLLCDNAQKFNSSESIYGTAARKIQEGADQVW 57
            MDF T+R KL  G Y SL   + DV L+C NA KFNSS ++Y TAAR I E A +++
Sbjct:  175 MDFGTMRAKLQEGLYTSLEQFERDVFLICSNAMKFNSSTTVYYTAARVINEVAQRLF 231          
BLAST of mRNA_L-elsbetiae_contig547.13729.1 vs. uniprot
Match: A0A2J6KUB5_LACSA (Bromo domain-containing protein n=3 Tax=Lactuca TaxID=4235 RepID=A0A2J6KUB5_LACSA)

HSP 1 Score: 58.9 bits (141), Expect = 2.290e-6
Identity = 27/51 (52.94%), Postives = 36/51 (70.59%), Query Frame = 0
Query:    1 MDFSTIRCKLMSGSYGSLRDLKLDVQLLCDNAQKFNSSESIYGTAARKIQE 51
            MDF T++ KL  G Y +L +L+ DV L+C NA K+NSS++IY   AR IQE
Sbjct:  194 MDFGTVKNKLDDGVYSNLNELEADVLLICSNAMKYNSSDTIYFRQARNIQE 244          
BLAST of mRNA_L-elsbetiae_contig547.13729.1 vs. uniprot
Match: Q5TNH7_ANOGA (AGAP009307-PA n=11 Tax=Cellia TaxID=44534 RepID=Q5TNH7_ANOGA)

HSP 1 Score: 58.9 bits (141), Expect = 2.900e-6
Identity = 35/110 (31.82%), Postives = 59/110 (53.64%), Query Frame = 0
Query:    1 MDFSTIRCKLMSGSYGSLRDLKLDVQLLCDNAQKFNSSESIYGTAARKIQEGADQVWPQAEDLLAGVMAI-----EAEARQHGIVGPASRPEAWPLDGHYTIFEVTPANE 105
            MDFSTIR K+    YGS+ +   D +L+C+NA K+N SE++Y  AA+K+     ++  Q+++L+  +  +     E  A++ G   PA   +    D H+       A+E
Sbjct:  319 MDFSTIRQKIEDNEYGSVTEFSDDFKLMCENAIKYNHSETVYHKAAKKLLHVGARLL-QSDNLMRSLRPLMTYMRELTAKELGFELPAGSADGPDSDFHHAHHTADSADE 427          
BLAST of mRNA_L-elsbetiae_contig547.13729.1 vs. uniprot
Match: A0A182LZX1_9DIPT (Bromo domain-containing protein n=5 Tax=Cellia TaxID=44534 RepID=A0A182LZX1_9DIPT)

HSP 1 Score: 58.5 bits (140), Expect = 3.930e-6
Identity = 35/110 (31.82%), Postives = 57/110 (51.82%), Query Frame = 0
Query:    1 MDFSTIRCKLMSGSYGSLRDLKLDVQLLCDNAQKFNSSESIYGTAARKIQEGADQVWPQAEDLLAGVMAI-----EAEARQHGIVGPASRPEAWPLDGHYTIFEVTPANE 105
            MDFSTIR K+    YGS+ +   D +L+CDNA K+N SE++Y  AA+K+     ++  Q ++L+  +  +     E  A++ G   P    +    D H+       A+E
Sbjct:  315 MDFSTIRQKIEDNEYGSVSEFSDDFKLMCDNAIKYNHSETVYHKAAKKLLHVGARLL-QTDNLMRSLRPLMTYMRELTAKELGFELPIGSADGTDSDFHHQHHTADSADE 423          
BLAST of mRNA_L-elsbetiae_contig547.13729.1 vs. uniprot
Match: A0A6A6KA67_HEVBR (Bromo domain-containing protein n=3 Tax=Hevea brasiliensis TaxID=3981 RepID=A0A6A6KA67_HEVBR)

HSP 1 Score: 57.8 bits (138), Expect = 7.030e-6
Identity = 27/51 (52.94%), Postives = 35/51 (68.63%), Query Frame = 0
Query:    1 MDFSTIRCKLMSGSYGSLRDLKLDVQLLCDNAQKFNSSESIYGTAARKIQE 51
            MDF+T+R KL +GSY +    + DV L+C NA K+NS E+IY   AR IQE
Sbjct:  228 MDFATVRKKLANGSYWTFEQFESDVFLICSNAMKYNSPETIYHKQARAIQE 278          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig547.13729.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
A0A6H5JJY6_9PHAE5.290e-4642.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHY8_ECTSI3.390e-4542.35Trithorax 3 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A6H5L4S9_9PHAE1.850e-3746.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FI07_ECTSI1.580e-3436.95GF22528 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A2C9WB92_MANES1.610e-752.63Bromo domain-containing protein n=1 Tax=Manihot es... [more]
UPI000B5D376C3.710e-752.63flocculation protein FLO11 n=1 Tax=Manihot esculen... [more]
A0A2J6KUB5_LACSA2.290e-652.94Bromo domain-containing protein n=3 Tax=Lactuca Ta... [more]
Q5TNH7_ANOGA2.900e-631.82AGAP009307-PA n=11 Tax=Cellia TaxID=44534 RepID=Q5... [more]
A0A182LZX1_9DIPT3.930e-631.82Bromo domain-containing protein n=5 Tax=Cellia Tax... [more]
A0A6A6KA67_HEVBR7.030e-652.94Bromo domain-containing protein n=3 Tax=Hevea bras... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036427Bromodomain-like superfamilyGENE3D1.20.920.10coord: 1..64
e-value: 1.7E-13
score: 52.3
IPR036427Bromodomain-like superfamilySUPERFAMILY47370Bromodomaincoord: 1..62
IPR001487BromodomainPFAMPF00439Bromodomaincoord: 1..47
e-value: 3.1E-9
score: 36.8
IPR001487BromodomainPROSITEPS50014BROMODOMAIN_2coord: 1..43
score: 9.849
NoneNo IPR availablePANTHERPTHR22881BROMODOMAIN CONTAINING PROTEINcoord: 1..187
NoneNo IPR availablePANTHERPTHR22881:SF11SWI/SNF NUCLEOSOME REMODELING COMPLEX COMPONENTcoord: 1..187

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig547contigL-elsbetiae_contig547:7441..9116 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig547.13729.1mRNA_L-elsbetiae_contig547.13729.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig547 7216..12294 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig547.13729.1 ID=prot_L-elsbetiae_contig547.13729.1|Name=mRNA_L-elsbetiae_contig547.13729.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=258bp
MDFSTIRCKLMSGSYGSLRDLKLDVQLLCDNAQKFNSSESIYGTAARKIQ
EGADQVWPQAEDLLAGVMAIEAEARQHGIVGPASRPEAWPLDGHYTIFEV
TPANEDAHGMHIAMRCAAAGTRARVAEVAGGNKDETAIDAAVRVAESVAS
SPVLLYTSGEILTEEEEILLECWLEAKSAKSETALSESDGSAKCRPMDLQ
SCDAMKKHSRVPATLVTPQFVSPDGQFLDQSAADKLVLSLNDVDNTISIN
VCGDLAA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036427Bromodomain-like_sf
IPR001487Bromodomain