mRNA_L-elsbetiae_contig5464.13723.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5464.13723.1
Unique NamemRNA_L-elsbetiae_contig5464.13723.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig5464.13723.1 vs. uniprot
Match: A0A6H5KDQ7_9PHAE (U-box domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDQ7_9PHAE)

HSP 1 Score: 127 bits (319), Expect = 6.870e-31
Identity = 58/63 (92.06%), Postives = 60/63 (95.24%), Query Frame = 2 
Query:  983 QHLCPITRCPVEDPAVAADGYTYERAAIERWLSEHDTSPVTGKVLETKVVFKNWSLVSSAPPP 1171
            QHLCPITRCP+EDPAVAADGYTYER AIERWLSEHDTSPVTGK LETKVVFKNWSLVSS+P P
Sbjct:   42 QHLCPITRCPMEDPAVAADGYTYERTAIERWLSEHDTSPVTGKALETKVVFKNWSLVSSSPSP 104
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BLAST of mRNA_L-elsbetiae_contig5464.13723.1 vs. uniprot
Match: D7G3T3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3T3_ECTSI)

HSP 1 Score: 115 bits (288), Expect = 7.330e-24
Identity = 53/71 (74.65%), Postives = 62/71 (87.32%), Query Frame = 2 
Query:  272 VYPDPTAPRPWTLSGLRDHAIATPAAAAVRGAVLRASREDSFWDGGKELALEVGQGVSWATSRWWAGGLER 484
            VYPDPTAP+ WTLSG+RDHA ATPAAAA+RGAVLRAS+E+S W+GGK LAL V +GVSW   RWW+GGL+R
Sbjct:  297 VYPDPTAPQRWTLSGVRDHAAATPAAAAIRGAVLRASQEESAWEGGKTLALNVLEGVSWTAKRWWSGGLDR 367
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BLAST of mRNA_L-elsbetiae_contig5464.13723.1 vs. uniprot
Match: D7G3T4_ECTSI (Protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3T4_ECTSI)

HSP 1 Score: 100 bits (250), Expect = 3.210e-22
Identity = 47/53 (88.68%), Postives = 49/53 (92.45%), Query Frame = 2 
Query: 1013 VEDPAVAADGYTYERAAIERWLSEHDTSPVTGKVLETKVVFKNWSLVSSAPPP 1171
            +EDPAVAADGYTYER AIE WLSEHDTSPVTGK LETKVVFKNWSLVSS+P P
Sbjct:    1 MEDPAVAADGYTYERTAIECWLSEHDTSPVTGKALETKVVFKNWSLVSSSPSP 53
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BLAST of mRNA_L-elsbetiae_contig5464.13723.1 vs. uniprot
Match: A0A7S1UFM5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UFM5_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 2.820e-15
Identity = 38/66 (57.58%), Postives = 50/66 (75.76%), Query Frame = 2 
Query:  992 CPITRCPVEDPAVAADGYTYERAAIERWLSEHDTSPVTGKVLETKVVFKNWSLVSSAPPPQKRKGG 1189
            CPIT  P+ +P VAADG+TYER+A+ERWL +HDTSP+TG+VL TK +F N +L ++ PP    K G
Sbjct:   37 CPITGAPMCEPVVAADGHTYERSAMERWLRDHDTSPLTGEVLPTKALFPNRTLAATNPPLAAAKAG 102
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BLAST of mRNA_L-elsbetiae_contig5464.13723.1 vs. uniprot
Match: A0A7R9UF69_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UF69_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 2.180e-13
Identity = 35/53 (66.04%), Postives = 43/53 (81.13%), Query Frame = 2 
Query:  992 CPITRCPVEDPAVAADGYTYERAAIERWLSEHDTSPVTGKVLETKVVFKNWSL 1150
            CPIT  P+ DP VAADG+TYER AI RW SEHDTSP+TG+VL TK +F N+++
Sbjct:   79 CPITGAPMCDPVVAADGHTYERTAILRWFSEHDTSPLTGEVLVTKALFPNFAI 131
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BLAST of mRNA_L-elsbetiae_contig5464.13723.1 vs. uniprot
Match: A0A7S2FZS1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FZS1_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 4.420e-11
Identity = 32/56 (57.14%), Postives = 43/56 (76.79%), Query Frame = 2 
Query:  989 LCPITRCPVEDPAVAADGYTYERAAIERWLSEHDTSPVTGKVLETKVVFKNWSLVS 1156
            +CPIT+  + DP VAADG TYERAAIERWL+    SP TG+++ T+V+F N++L S
Sbjct:    8 VCPITQEAIVDPMVAADGVTYERAAIERWLATSRLSPATGQIMATRVLFPNYTLRS 63
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BLAST of mRNA_L-elsbetiae_contig5464.13723.1 vs. uniprot
Match: A0A7S2EJ12_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EJ12_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 1.150e-10
Identity = 32/56 (57.14%), Postives = 40/56 (71.43%), Query Frame = 2 
Query:  992 CPITRCPVEDPAVAADGYTYERAAIERWLSEHDTSPVTGKVLETKVVFKNWSLVSS 1159
            CPIT  P++DP VAADG+TYER AI RWL   D SP+TG+ L  K +  N+ L+SS
Sbjct:   37 CPITGQPMKDPVVAADGHTYERHAIRRWLQTSDMSPLTGQTLSHKELVPNYLLLSS 92
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BLAST of mRNA_L-elsbetiae_contig5464.13723.1 vs. uniprot
Match: A0A7C9DRA3_OPUST (U-box domain-containing protein n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9DRA3_OPUST)

HSP 1 Score: 70.1 bits (170), Expect = 1.320e-10
Identity = 31/61 (50.82%), Postives = 43/61 (70.49%), Query Frame = 2 
Query:  977 PQQHLCPITRCPVEDPAVAADGYTYERAAIERWLSEHDTSPVTGKVLETKVVFKNWSLVSS 1159
            P   +CPI +  +EDP VAADGYTYER AIE+WL+++DTSP T   L  K +  N++L+ +
Sbjct:   56 PAHFICPILKDIMEDPYVAADGYTYERRAIEQWLTDNDTSPTTNLPLPHKFIMANYTLLEA 116
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BLAST of mRNA_L-elsbetiae_contig5464.13723.1 vs. uniprot
Match: UPI0004988E24 (U-box domain-containing protein 52-like n=1 Tax=Malus domestica TaxID=3750 RepID=UPI0004988E24)

HSP 1 Score: 68.9 bits (167), Expect = 1.490e-10
Identity = 30/61 (49.18%), Postives = 43/61 (70.49%), Query Frame = 2 
Query:  977 PQQHLCPITRCPVEDPAVAADGYTYERAAIERWLSEHDTSPVTGKVLETKVVFKNWSLVSS 1159
            P   +CPI +  +++P VAADGYTY+R AIE+WL E+D SP+T   L  K V  N++L+S+
Sbjct:   28 PNHFICPILKDVMDEPCVAADGYTYDRKAIEKWLEENDNSPMTNLPLPNKDVILNYTLLSA 88
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BLAST of mRNA_L-elsbetiae_contig5464.13723.1 vs. uniprot
Match: R1EAQ5_EMIHU (U-box domain-containing protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1EAQ5_EMIHU)

HSP 1 Score: 67.4 bits (163), Expect = 2.530e-10
Identity = 32/58 (55.17%), Postives = 40/58 (68.97%), Query Frame = 2 
Query:  977 PQQHLCPITRCPVEDPAVAADGYTYERAAIERWLSEHDTSPVTGKVLETKVVFKNWSL 1150
            P   +CPIT   + DP VAADG +YER+AIERWL+   TSP+T   LE+K +F N SL
Sbjct:    3 PDDFICPITTEIMSDPVVAADGQSYERSAIERWLATKSTSPLTSAELESKGLFPNHSL 60
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5464.13723.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KDQ7_9PHAE6.870e-3192.06U-box domain-containing protein n=1 Tax=Ectocarpus... [more]
D7G3T3_ECTSI7.330e-2474.65Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G3T4_ECTSI3.210e-2288.68Protein kinase n=1 Tax=Ectocarpus siliculosus TaxI... [more]
A0A7S1UFM5_9STRA2.820e-1557.58Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7R9UF69_9STRA2.180e-1366.04Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S2FZS1_9STRA4.420e-1157.14Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S2EJ12_9STRA1.150e-1057.14Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7C9DRA3_OPUST1.320e-1050.82U-box domain-containing protein n=1 Tax=Opuntia st... [more]
UPI0004988E241.490e-1049.18U-box domain-containing protein 52-like n=1 Tax=Ma... [more]
R1EAQ5_EMIHU2.530e-1055.17U-box domain-containing protein (Fragment) n=1 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5464contigL-elsbetiae_contig5464:588..10906 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score73.2
Seed ortholog evalue1.2e-10
Seed eggNOG ortholog42099.EPrPV00000022746
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Modified RING finger domain
EggNOG OGs1MFND@121069,2CWR7@1,2RV1F@2759
COG Functional cat.S
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionU box domain
Ec32 orthologEc-22_002200.1
Exons7
Model size2785
Cds size468
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816572.8217037-UTR-L-elsbetiae_contig5464:587..8581622816572.8217037-UTR-L-elsbetiae_contig5464:587..858Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5464 588..858 +
1691683656.3536615-UTR-L-elsbetiae_contig5464:587..8581691683656.3536615-UTR-L-elsbetiae_contig5464:587..858Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5464 588..858 +
1622816572.8346894-UTR-L-elsbetiae_contig5464:1939..20491622816572.8346894-UTR-L-elsbetiae_contig5464:1939..2049Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5464 1940..2049 +
1691683656.36451-UTR-L-elsbetiae_contig5464:1939..20491691683656.36451-UTR-L-elsbetiae_contig5464:1939..2049Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5464 1940..2049 +
1622816572.848041-UTR-L-elsbetiae_contig5464:5131..52391622816572.848041-UTR-L-elsbetiae_contig5464:5131..5239Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5464 5132..5239 +
1691683656.3757496-UTR-L-elsbetiae_contig5464:5131..52391691683656.3757496-UTR-L-elsbetiae_contig5464:5131..5239Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5464 5132..5239 +
1622816572.858873-UTR-L-elsbetiae_contig5464:6560..66961622816572.858873-UTR-L-elsbetiae_contig5464:6560..6696Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5464 6561..6696 +
1691683656.3864546-UTR-L-elsbetiae_contig5464:6560..66961691683656.3864546-UTR-L-elsbetiae_contig5464:6560..6696Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5464 6561..6696 +
1622816572.8703887-UTR-L-elsbetiae_contig5464:7724..78291622816572.8703887-UTR-L-elsbetiae_contig5464:7724..7829Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5464 7725..7829 +
1691683656.3985357-UTR-L-elsbetiae_contig5464:7724..78291691683656.3985357-UTR-L-elsbetiae_contig5464:7724..7829Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5464 7725..7829 +
1622816572.9214046-UTR-L-elsbetiae_contig5464:9319..109061622816572.9214046-UTR-L-elsbetiae_contig5464:9319..10906Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5464 9320..10906 +
1691683656.4383366-UTR-L-elsbetiae_contig5464:9319..109061691683656.4383366-UTR-L-elsbetiae_contig5464:9319..10906Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5464 9320..10906 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816572.8833663-CDS-L-elsbetiae_contig5464:7829..79401622816572.8833663-CDS-L-elsbetiae_contig5464:7829..7940Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5464 7830..7940 +
1691683656.4104939-CDS-L-elsbetiae_contig5464:7829..79401691683656.4104939-CDS-L-elsbetiae_contig5464:7829..7940Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5464 7830..7940 +
1622816572.894653-CDS-L-elsbetiae_contig5464:8423..86381622816572.894653-CDS-L-elsbetiae_contig5464:8423..8638Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5464 8424..8638 +
1691683656.4194775-CDS-L-elsbetiae_contig5464:8423..86381691683656.4194775-CDS-L-elsbetiae_contig5464:8423..8638Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5464 8424..8638 +
1622816572.9066157-CDS-L-elsbetiae_contig5464:9177..93191622816572.9066157-CDS-L-elsbetiae_contig5464:9177..9319Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5464 9178..9319 +
1691683656.4287195-CDS-L-elsbetiae_contig5464:9177..93191691683656.4287195-CDS-L-elsbetiae_contig5464:9177..9319Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5464 9178..9319 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5464.13723.1prot_L-elsbetiae_contig5464.13723.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5464 7830..9319 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5464.13723.1

>prot_L-elsbetiae_contig5464.13723.1 ID=prot_L-elsbetiae_contig5464.13723.1|Name=mRNA_L-elsbetiae_contig5464.13723.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=156bp
MKGAVSGGTAAVASSTGSDHGGGGGGSGVGSAGSTTPVSAAAVVVASPEE
TERKTMTAAGLAAVPPSGLSRPQPPPPPQQQQPQQHLCPITRCPVEDPAV
AADGYTYERAAIERWLSEHDTSPVTGKVLETKVVFKNWSLVSSAPPPQKR
KGGVV*
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mRNA from alignment at L-elsbetiae_contig5464:588..10906+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5464.13723.1 ID=mRNA_L-elsbetiae_contig5464.13723.1|Name=mRNA_L-elsbetiae_contig5464.13723.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=10319bp|location=Sequence derived from alignment at L-elsbetiae_contig5464:588..10906+ (Laminarionema elsbetiae ELsaHSoW15)
GGTGGTGTTGCTGTGCCTGTCCAACCGCCTGGACTTCTTTCCGCTCCCGG
TGTGGGGCACGGACACCGCCGCCGACCCCGGCCAGCCCGGGTCGCCGTCG
TGGTTGTGGGCGAGGGATGCTTCGCAGCGGCGGTTGCCGAGGCCCAGCGG
CGGCGGCGGCGGCGGCGGCGGCGGCGGGTTTCGAGTGGAGGAAGTCGGCG
ACGACTTCTTCTTGATCTCGTACGCGACGCCGGAGGGGTGGCGGTGCGCG
GTGGAGGTGCACCGGTTCCTCGTGAGTTCGTCGGCATGTTGGTGGTTTTT
TATCGGCCGGTTGCCGCCGCCCGATCTCCGTGTTGTTTTCGCCTGCTGCT
GCTGTAGGAGAGGATTCAGGTGCGGGTACCGAGATCGGGCAGGGTTGCTG
CTCAGCCTGCGTATCCTGTGTGCGGGGGGGTGTTAAACAGCGACACGAAA
AAAAAGCGGAACAGTAAATAAAAAGTGCAACGCTGACGGCACCCTCTCTG
GCTTCTCCTCGCCATCCTCTTCGTGTGGTGGGAAAAACACAAACTGGTGC
GTTTGGTATTTTTGTTGTTGTTAATATCGCGCAAAAAAAAGGCAAAAGCG
TCCGAGCTTCTAGGCTGCTGTTTTCCATCGGGGGCGCTAAAACTGCCGCC
CCCGGCCGGGCCACGGAGGTTTGGAGGCCACCAGCCTAGAGAGGCGAAGG
CGGGCAGGCATGACGAATACCTTTCGTGTGCGCACAGCAGTAGCCTTGCC
GGGTTGTGCTAGAAGAAATCATGTGGGATGAAGTATGGAAACGGCTATTA
GGGGGTCGGTTTGGGGTTAGGGTAAGGGTTAGGGTTAGGATTACGGAACC
CCTGTCTATTCTTCACGCATAGGCACCCACACTATCGATCTCGAGACTGG
CTGGGAGCATCTTCTTGTTTAACAACCAGCCGATACTCGCGTTCGAACTC
TCGTCGTGTGAGGGCACGCGCCAGCACAACCCACAACCCCACCCCTTCAG
AGCGGGGGCACCGCCGTCCTCTCGACGTCATTCGCCGTGGGGTTGGCCGC
CCACTCCTGTCCGTGTGGTCTCCCTGAAGACGCTTGATCCGTAAATATAT
ATATTTTTTGCTCCCACGGGGCCCCCATGGTACCGGGCCGAGAGTTGGGC
TTTCCGCGTGTTGACCCACCTCGATTTGGAGTGCATGCTACTAGTGCTCT
GTTTTTCAATGGGCACGTGCTTGGTCTTGATCAGTGGCCAAGGCAGCGCC
ACTGTTTTACCCGGGCAATGCACACATCCCCGCCGACGTCACTCCCTCCC
CGCCGCCGCCCCTCTGCCTTCCACTCCGGGGGCTCCGTGGTTTGTCAATC
AGGTGTACCCCGATCCCACGGCGCCCCGGCCGTGGACTCTCTCCGGGCTC
CGAGACCACGCGATCGCTACTCCGGCGGCGGCGGCGGTCCGCGGGGCGGT
TCTCCGCGCCAGGTGGGTGAACGCAAACACCGGCGCACGGACAGAGTCAG
TCGCCTGCCGTAGGTGACATAAGATAAGACACCACACCCCCTGGACCGAT
TTTCAAAGCTCAAGTACTCCACACAGCAGGCAGAGCGTCAGTCCCGAAAA
AAGGGCGGCGTTGGAAAGATCTCGTCGAGAGCTTTCCGAAAATGTGGCGT
TTGTGGTTTAGAATCGTGTTCGTTTGCGGAGTAACCAAGCTTTCAATATC
GGTCCAGGGGGTGTCTTATCTTATGTCGCCTACGGTAGCGGGCGGGGGCC
GGCAGATATAATATGCCGACTTGTGAACTACTGGCCGGCGAGAAGTGGGG
AGTCGCTGCCGTCAGGTGTATTTAGTTAGTTTAGTCGTAGGAAAAGCCCA
GAAGGAAGGTGTGCTGGCGGTGTTGTTGTCAGGGTTTTTATTGTTGTTGT
TGTTGTTGGACGTTTTTAATTGTGATGGACGTTGACACAAATTTGTGGGG
GAGGATGTCATACATACTTCGTATGTATTTGTGTGATAACACAAACAATT
CCCCCCCAACATCTTCTTTCTGAACCCATCTGGTACATACTATGTTTGTC
TTTGGCCCGGTTGCATCTTGCGTTCAGTAGCCTTGGCAGGTTTGACTACT
ACTAGAAGATATCATATGGGATAAAGTATGGAAACGGCTAATGGGACTGC
CTTCGCGAGAAAAAACGGGGAACATTGGTTTATATGTGAGATAGAGTAGT
AGGGGTTCCGTAACCCTAACCCTAACCCTAACCACAGACCCCCCAAACAT
TCTCCGATTCCATACTTTATCCCATATGTTTCGCTGGCCAAAAACCTGCG
TAGACTACCGGGCTAATGGGGGGTCGGTTTGGGGTTAGGGTTACGGGTAC
GGTTATGAAACCCCTGTCTATTATTTTTATTTCCTATTTATACAGACAGA
GGAAAATTCTTCGCGAAGGGAGTCCCTTGCGTTGTCCTTTCTTCGCTCTG
TCGAGTCATTTTGATAAGGGCCAGCATCGAAGAGGGCGAGGGCGGCCGGC
CCGCTCGAAACAAACGTCGTCGGGGAGGTACTTATCGAGCGAAAACTTTT
CGTCATTTAGGTGTTTTTCTACTGGGCTGGACCAATATTACGTCACTATA
TGGAATACCGTTCGAAGCTCATGGGAGTCGGCTGTCTCTCTGTGGTCGTT
TGATTAACTGTTTTATTTTCAAAACGACCCCACCCACCTCCACGCGTATT
TAGCGAGCAACGGCGGCTTGCTTGGAACTCCCGTCGGTGCTGGCACCAAA
TCTCCGGAGAGCGACTTGGTCCGTTTTGTTTATAGTGATTCGTCGCGTGT
CTTTTTCGCCGCTCGGCTTCGGCCACGCGTCGCATCTTAAAAACGGCTTG
CTTTATGCTTCGGTTTGTATTGCGTTGTTGTTCATGACGAGGGAAAGGGA
CAGCTGCACCCTTCTCGCGATAAAACCCAAGGCAAGCACCGCAGGAGGAA
GTTGGGGCAAAAAAAGAAAATAAAAAAGAAGAAAAAGCCCCAGTGTTCAC
CTCCTCCTGTGTGACCCCGGTTGGTTCTAGTTGTACAGACAAATGCACTT
GCAAAGTGTAGTACCTCTAAGTACACCGCAAGGTGTAGTATACGTCTCCA
CTTGGGGGGACTGTCGCCAAAATGAATGGAAAGGACACACACACACACAC
ATCGCCCCCACGCTTTTTTTTTAAGACTGCACCCCCCCTCCCCCCCAGTT
CGGTATGCTTGTGCACCCCCCCCTCCTTCTTCCTATCTATTAGCAAAAGG
GAAAGTTTTATAGACGTGTGTTGTTTCCACATTTAAAACCGTTCCGATCT
CTCTGTATCCAGTACACCTCCATGAGTCCCCGCACTGATCCAACACCGAC
GCGATCGATTCCCGTGGTGACAGGATACCTTACCCTAATAAAGGTTTAGA
CTAGATCTATCTAGACTGCTGAAAACTGAAAACAGATGTAATGGACCCGA
AGGATCCACAAATCGTGGTCGGCGAAAAAACGCGTTCTATTTTGTAACTG
TCGAGTTAAGCCCAGAGTCAGCAAGAGGCGTTACTATGCCCGTATCATCC
TCTGGGGCCCTGCTGAGCAAACGCCACCCACTCATGCGGAAACGTCCTCG
TAGCCTTTAGGTGCGCTTGAGAGCGGGTATAAGATGTAAGAGCTGCACAG
AAGGTGGACACGGAGAGAGAAAATAAAGCACATATGTAGGGGCTGGCCAG
GGTTGAAAGGGGTCAACGACTTGGCGTGTTTTAAAGACTCCACCCGTCAT
GCCTGTGCCCCCCCCCCCCCCTCTTCCCTTTTTTTTTTTTTTTTTTTCCG
TAATTCCTTTTCCCCTCAAATATTCTCTTTATTTNNNNNNNNNNCCAATT
CTTCCATTTTTTTTTTTTTTTTTCCAGGGAAACCTCGTCTCAATGCAATT
CTAATGCTTCTGATACATAGCTCACCTTAGTAAAGCTGCCCTCTCCAGGA
ATCATCACCAAACAGTTCTCGCTTTACTTGTATACACATCTGGGCGCGGC
ACATCTCGATAAAGCCGCCCTTGTTCCCAGGTTTCGGTTCTGAATACCGT
AGGTGACATTAGATAAGACACCCCCTGGAACGATATTGAAAGCTTGGTTA
CTCCGCAACGAATACGATTCTAACCACAAACGCCACATTTTTGGACGGCT
CTCGACGAGATCTTTCCAACGCCGCCCTTTTCGGGACTGACGCTCTGCTT
GCTGTGGAGCACTTGGGCTTTGAAAGTCGGTCCAGGGGGTGTCTTATCTT
ATACTTCGAAGTATCACATACGATAGTTCTCGGCTTTATATCTGGGCGCG
TGCGCGCTCGCTTTTCTTGCTCTTTTGGGGTCGCCGGTCGGCGCGTGGAA
CGTGGATACCTAAATCTATCCTGCGTTTTGCGTCTCGCGTCTTGCGTCTT
GCGTCTTGCGCCTTGCGCCGTGCGCCTTGCGCCTTGCGCCGTGCGTCTTG
CGTCTTGCGTCTTGCGTCTCGCGTCTTGTGTCTTGCGCCTTGTGTCTTGC
GTCTTGCGTCTTGCGTCTTGCGCCTTGCGTCCTGCACTTGGCAGCCGAGA
AGACTCCTTCTGGGACGGGGGCAAGGAGTTGGCCCTCGAGGTCGGCCAGG
GCGTGTCCTGGGCAACCTCGCGGTGGTGGGCGGGCGGGCTTGAAAGGGTC
AGGTGAGCACGCACAAATGCACGCACGAACGCACGTAGCAGCAGCAGCAG
CAGCAGCAGCAGCAGCAGGAAGGCAGGCGGGCAGTGATGTCTTGAAAGAT
AAATAAGGTATATACATACAACCAAAAACGAAACCTAGCCCTAAATAAGG
TACATAAAATCAAAAACGAAACCTAGCCCTAAATAAGGTACATAAAATCA
AAATCGAAACCTAGCCCTAAATAAGGTACATAATAAAAAACGAAACCTAG
CCCAAATTTGAAACGGGGCTCCGTGGGGTTGTGTTTCAACCGGTATGTAT
GTAGGGACGTAAAATATTGATCCGGCCGAGTAGAAAAACACCTAAAACTA
AAATGTCCGAATAATTCATCATCTCCCCTGCCGGGGTTTTTCTTGAAGCG
ACGGGGGGTGGGGGGTGAAACGGTTGGTCTGGCCGTTTCGCTGGGGGGCG
CTGTGATGTTCCTGCGGGTTTGTTGAAGCCGCACAGCGAGCGCGGTGCGT
GCAGTTGGCGCAGAAATGTATCTGCGGGAGCGTGGCTCTACCAAGGTTGA
TATTTCCCTCTCCCCTCGGCAGTCTCGGGAGAATACTACTATTCTAAAGG
TAATTCGAAAGAAAACAAAACAGCACATGCTTGTCTTCGTATCCGACGTC
CTTGGCACGTCCTCAGGTCTTCTGAGTAACCCCCTCCCCCCCCCCCCCCC
TTTTCTTTTTTTTTCGTCGCCCCCCCCCCCCCCTCTTTTTTTTCATCTTT
CGCCCCTCTTTTTCTCTTTTGCTCGGTACCCCTGTCACACTGTCTCTATG
TACACATGTCAACTCCATGTGCTACCTGAGGGCTGATTGTTGCTTCCCTC
ATATTTTTCATTCGCGTTGGTTGTTCGTTTTCTTGTTTTCCCTTGACTTT
GCCTACGCCGCATCCGTGGTGGTTGGGCCGCTAAGAATGTTGGAAGTATC
GGGCTGAGATAGATCTGGACGGCTCCTTGGCATGTGAAGACAACCAACCA
CGGCAACAGCAACAACAACAGCGATGACTGCGCCATCTAGAGTACTCAAG
AAACCAGACCTTCAGATCGTTTGTCGAAAGAGCCCCTTCAAGCACAAAGC
ATCTGGAACAATCCCCTCGGGGCGTGCCCCGTGTCGACCGTTCCAAACAA
CCCGAAAGGAGCATGGCTTCAAAAACCCACGGAAGCTTTCAAATCCCCGT
GTCGACCGTTCCAAACAACCCAAAAGGAGCATGGCTTCAAAACCCACGAT
TTTTTTTTTTGAGTTTTGGATGTCCAATCGTCGTGCGTGCGGCTGCTGTG
GCAACCCCAACGTACGTGCGTAGGAGCGATGTGTTCTTCGCGCTGGGCTT
GACGGACGCCGACTCGGTAGCCAAGCCCGAAGAAAGCCAGCAGAGAGACG
GGGCGGAGGAGGAAAGTGAACGAGCCGGCGAGGAGGAGGAGGGTCGAGAC
GGCACGCAGGTGATAACGCTAAAGGGTGGGGAATCTACTGTATAGATCCA
GACAAAGTGCCGGGCACCGGCCCATTGCCTGGGACTTTCACTATTGTGAC
GTGCTGCAGTGGCAGGACTGTTAATAGCACTAGGACTAGGGCTTTCACTT
TTGTGACGTCCTTCAGTGGCAGGACTAGAAGTAGGACTAGAAATAGGACG
TTAGTTTTTTTTACGTGCTTCAGTGGCAGGACTATTAACGGAACTAGGAC
TAGGACTTTCATTTTTTTGGCGTGCTTCAGTGGCAGGACTAGGAATAGGA
CTAGGACTAGGACGTTCACTCTTTTGTCGTGCTTCAGTGGCAGGACTAGC
ACTAGGACTAGGACAAGGACGTTCACTTTTTTGTAACGCACTTCAGTGGC
AGGATTGTTAATAGGACTAGGACCAGAACTTTCACTCTTTTGGCGTGCTT
CAGTGGCAGGACTAGCAGTAGGACTAGGACTAGGACGTTCAGGACGTTCA
CTCTTTTGGCGTGCTTCAGTGGCAGGACTGTTCATAGGACTAGGACTAGG
ACGTTCACTCTTTTGGCGTGCTTCAGTGGCAGGACTATTAATAGGACTAG
GACTAGGACTTTCACTCTTTTGGCGTGCTTCAGTGGCAGGACTACTAATA
GGACTAGGCCTAGGACTTTCACTCTTTTGGCGTGCTTCAGTGGCAGGACT
ATTCATAGCACTAGGACTAGGACTTTAACTTTTGTGACGTGCTTCAGTGG
AAGGACTAAAAAGGACTAGGACAAGGACTTCACCTTTTTTTTACGTAATT
CAGTGGCACGAAGAGAGGGAGGGGCGGGTTTGGGTCTACTGGTGTAGTAT
TTTTCGCTAGAATTTGGGGCGCTTAGATATAGGGCAGCACCAACCAGGGC
CCCCGAGCTTGGAATTTAATTCTGGTCTGATTCCAAAACTTTGATATCAA
TCAGCCTTGATCGCCCCTCTCGCCTCCTCTTCCCTTCTCGATTCAACGTG
GGATTTTCCTTTTCGGTGTTTGTGCATCAAACAATAGAGCGGCGCCGAGC
CCCATCAAAATCAGCAGCAGCAGCAGCAGCAGCTGTCGCCGGCGGCAATC
CCTGAAAGCGGCACCGGTTTGCTGGCTGAAGACGGGGCCGACATGAAAGG
CGCCGTTTCTGGCGGTACTGCTGCCGTGGCGTCTTCTACCGGTAGTGACC
ACGGCGGCGGCGGCGGCGGCAGCGGCGTCGGCAGCGCCGGGTCAACCACA
CCAGTGAGGCTTTCACTCAGGGGTTGGGGGTTACCCTGCCAGCCCGTCGC
GAGTCTACTGCTTTGACCGGGTTGTTTTAGTAGACTGCGCTATTTCCCGC
GCGAGGCGTTGGTTATGTACCTCCTGAATTAAGAGGTTATATTGATCTGC
TTGGTCCCTGCCCTTTGCACTGGCTTGGTCTTGGCTCGGTGACGGAAGTT
GAGGCTGCACTGGCAGCCACTATTTCGTGTGAGGAAACCACCGCCAACTC
TGTTGGTTCCTCGTGGACAAATGCCTTTTTCCACCTCGCTGACGAGGCCC
CTCAAAAGGATGAAAGAGAGCTATACCCCCTCATGTGTTAGTTGCTTCAA
CCACTGAACCCCTTTGCTCGGCCCACATCGATGCTTTTCAAGGCGCAGGC
GTTTCTAGTTCTTGAGACGCACACCAGGTTGTTGTGCATGTGCGTATGAT
ATGTATCACTCATCGTGTGAAATACATACTTAGCAGGTATCGGCGGCGGC
CGTGGTTGTGGCATCGCCTGAAGAAACGGAGCGAAAAACAATGACGGCGG
CTGGCCTCGCCGCCGTGCCCCCCTCGGGGTTGTCCCGGCCGCAGCCGCCG
CCGCCGCCGCAGCAGCAGCAGCCACAGCAGCACCTTTGTCCCATCACGAG
GTGCCCGGTGGAGGACCCTGCTGTTGCTGCCGACGGTTACACTTACGAAA
GGTGAAGAAGCAACTTTTTTTTTCATTACGGATGCAGAAATAACCACACG
CGTAAATACCGGACGTGTTTTTTTTCCCGGCCGATGCGATGTACACAGCA
GTTTTTTTCCTGGGATCAATGTTGTGCCACGGGCGATCCTTCTTGATTTG
TAGAAGCGTGCACGCGTACACTTGTGCTGAATAGGCCGCCACCCTTTCTC
GGTTAGCGGCTTCTGTTTCAAGTCTTGGTATGTCCAGGTGACCTGTTGCC
GGCATTTTCTACACACGTGCGTTCATTTTAAACAGCGTGTAATATGTGTA
TGCTGCTGATGATGACCAATCCGATGACCCTGTTTTCTTGGGGTGTCTTG
GTTCTGACCTAAGTTTCCCCATGCCACCCGACAATTCGTACATGCTGTGG
ATGTTATCTCTAGGTACCCCGTCTTGTGCTTTTTTTTTTTCTGTGAATAC
ATACATACATACATACGTTACATACATGCATACATACGTATCTGGAAAAA
TTGGACGCTTTTGTTCTGCATCTATCTGTATGCTGCACAGGGCGGCTATC
GAACGCTGGCTGTCTGAGCACGACACAAGTCCCGTCACCGGCAAGGTTCT
CGAGACCAAAGTTGTCTTCAAGAACTGGTCCCTCGTTTCCTCCGCCCCCC
CCCCCCAGAAAAGGAAAGGAGGCGTTGTGTAGGCGTCAAGAACTGGTCCC
TCGTTTCCTCCACCCCCGCCTCCCGGGCCACACCAGGGGCAGCAACTGGT
ACATGAGCCCCCCCCCCCAGAAAAGGAAAGGAGGCGTTGTGTAGGCGTTG
TGTATATGTTTTGTTGCTTTCGACGTTTTCGCTTTGCATGGGAGAGATAA
CGTTGCCGCCGCCAACGCAAACGGGCTGTTTTTTTCACTCATTTATATCT
TCGCTGTGAAGGAAGGCACAGAGGAGAAAATAATCTCGACTGTTTGGCGA
TGTAGACTATGTAACACGCGTTCACGTGCGGACAGCAAGGTTGCCTGCCT
ATTATGTGTAGGTATATGATCGTCTCGCTCTTGGGGCCGGAGTGGCCAAC
AGAATCGTGTAAGCACGTGACAGAGAGGGTCGTGGCAACTGCACTGATTG
TGCTAGGAGGGGGTACGACGACGGGCCGCGAAGCCTGACGCATAGGGGGG
GGGGCGGTTCATATCGCCGAAATAAAATCGTGCCCCTTCGAAGAAAAAGC
CATCGACGAGAGATATCGACGGGAGTTGTGTTCCTTGCTTCGACGGTGGT
GGATGTCGGGGGGGGGATCCTGTGGGCTTGTGGCCTTTTTATGCGTGCGG
GGGCTGTGCGTTTGTGTGGATCGCAAGAGCGGCTTGTGGGGGCACGCTGC
GTGTTGTGCCTTTGGTGGTTGGGTGCAGATGCTTCTGTAGGGCAACAATC
TGTCAAACTAGCGCCGATATCACAGCGAGAGAGGCATTCGAAGCGGTTTT
CTGGGCACAGCCGTCGCCCGCCCGCCTCGGCGCGAGAAAGGCCGGGTCCG
CCACTGTGTTATTTTCTGTTCCGCGGCAGCGCACAAAATAGATGGGGATT
TCTCAATTTATTGTGATTTTTTTTCTGTTTCGCATATGTACGTGCCCGGC
TTGTTGTTCTCTCTGTCTTCGTTTTTTTTTGTCGGTACGTGCACCGAAGT
TCTGTCTTAGCGCCGAGTGGGGGGGGTTAATCCGGGGCACCAATAGGCCA
CTCGGTGTTTCGTGGGTGCTACAGCTGCATACCTGTACGTGCGCCACCAA
TGGTGCTAGCGACGTCCGGTTCGGTTGATGCAACCTTGCGGCAAACCTTA
GACCACACGCAGTCTCTATGAGGAGGACGTTGCCGATGTCGAGAAACCAG
AGGTGCTGATGTACCGCGTTTAGCTGGTGTTGATCAAGACTAAAGCGAAA
AAACTGGTCGTTAGAAAATGGCGCCAATCACGCCACGGTGTAGTGCGTTA
GGGCGCCCCTGCACCAGGGAACCCCAAGCCCAAAACTCGCAAGGGGAACC
TCTGCATTAGGGGATCCCCAGCCAAAGTAGCAAGGGAACCTGTCCCCTCC
CAGAAATTATACAGAGCCTGTCGGAGGTTGCCGTACGATTTCGATGGTAG
TGAACCTGTCAGAGGTTGTAGTAAGATTTCGTACCACCAAAGGGGCCAAA
CGCATTACGAAATCGCCTCCCAGAAATGGCGGAGAAAGAGTCAGAGGTTG
CAGTACGATTTCGTACCACCCAGGGGACCAACCGCATTATGAGATCGCCT
CCCAGAAATGATACAGGAC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig5464:588..10906+

>mRNA_L-elsbetiae_contig5464.13723.1 ID=mRNA_L-elsbetiae_contig5464.13723.1|Name=mRNA_L-elsbetiae_contig5464.13723.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=936bp|location=Sequence derived from alignment at L-elsbetiae_contig5464:588..10906+ (Laminarionema elsbetiae ELsaHSoW15)
ATGAAAGGCGCCGTTTCTGGCGGTACTGCTGCCGTGGCGTCTTCTACCGG
TAGTGACCACGGCGGCGGCGGCGGCGGCAGCGGCGTCGGCAGCGCCGGGT
CAACCACACCAATGAAAGGCGCCGTTTCTGGCGGTACTGCTGCCGTGGCG
TCTTCTACCGGTAGTGACCACGGCGGCGGCGGCGGCGGCAGCGGCGTCGG
CAGCGCCGGGTCAACCACACCAGTATCGGCGGCGGCCGTGGTTGTGGCAT
CGCCTGAAGAAACGGAGCGAAAAACAATGACGGCGGCTGGCCTCGCCGCC
GTGCCCCCCTCGGGGTTGTCCCGGCCGCAGCCGCCGCCGCCGCCGCAGCA
GCAGCAGCCACAGCAGCACCTTTGTCCCATCACGAGGTGCCCGGTGGAGG
ACCCTGCTGTTGCTGCCGACGGTTACACTTACGAAAGGTATCGGCGGCGG
CCGTGGTTGTGGCATCGCCTGAAGAAACGGAGCGAAAAACAATGACGGCG
GCTGGCCTCGCCGCCGTGCCCCCCTCGGGGTTGTCCCGGCCGCAGCCGCC
GCCGCCGCCGCAGCAGCAGCAGCCACAGCAGCACCTTTGTCCCATCACGA
GGTGCCCGGTGGAGGACCCTGCTGTTGCTGCCGACGGTTACACTTACGAA
AGGGCGGCTATCGAACGCTGGCTGTCTGAGCACGACACAAGTCCCGTCAC
CGGCAAGGTTCTCGAGACCAAAGTTGTCTTCAAGAACTGGTCCCTCGTTT
CCTCCGCCCCCCCCCCCCAGAAAAGGAAAGGAGGCGTTGTGTAGGGCGGC
TATCGAACGCTGGCTGTCTGAGCACGACACAAGTCCCGTCACCGGCAAGG
TTCTCGAGACCAAAGTTGTCTTCAAGAACTGGTCCCTCGTTTCCTCCGCC
CCCCCCCCCCAGAAAAGGAAAGGAGGCGTTGTGTAG
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