prot_L-elsbetiae_contig545.13702.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig545.13702.1
Unique Nameprot_L-elsbetiae_contig545.13702.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length696
Homology
BLAST of mRNA_L-elsbetiae_contig545.13702.1 vs. uniprot
Match: D7G2W7_ECTSI (Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2W7_ECTSI)

HSP 1 Score: 640 bits (1650), Expect = 9.250e-222
Identity = 366/530 (69.06%), Postives = 415/530 (78.30%), Query Frame = 0
Query:  187 EGLVYSITTDTGVFNTGLNLNLCGMLSILGGPDVMTAAVRTVSLRFNTFNGQRDGLFSSVDITARFTLGGEVLIDTNVQVFSMPYFFDDSPWIVCRAVAMFAFALLLARYLVKDLKQALRELKDGRHIISISLRKIPLNTATVLNLVGDGVFMWNLVLWTTVAATASKFELIPTLSYNNAAEQVRAFSDDLALVALERWKRDAAAVAGSIFGLARLFIMLRFHPRLSLVTDVLTASAVHLVHFFIMFFMVVAVYSNLGWVIFGPSLSLFATWTMSFVTMTRIALGEFDNMYPLMVEVNDGAAFIIIATYQTLQGILLLNIVISILLDGFQMVHKRNSAIAADTLRQTVMTTLGRWRLRLLG---AVFHRAPLLPLSSSCRNGS----SPSPQVKNPAHGKLGSK--RQRSSFSS--AAGAGAGAVVA--GVPVAPPGVP----RSVAAMPPPAFTTKASVGTVKWKFDIKSQ---VARNGGLTRGQRLALSHRHYDVRAAVEVLRRSPLPESAVWRKMRQIVAARFVAVS 696
            +GLVYSITTD GVFN+GLN NLCGML+ILGGPDVMT AVR+VSLRFNT+NGQ DGLFS VDITA FTLGGEV + T+V+VFSMP+FF  SP IV RA+AMFAF L+L  Y+ KD+ +A RE++DGRH +S+SLR +P+ TAT LNLVGD VF+WNLVLW  VA TA+KFELIPTLSYNNA+EQVRAFS++LALVALERWKRDAAAVAGSIFGL RLFIMLRFHPRLSLVTDVLTASAVHLVHFFIMFFMVV VYSNL WVIFGPS  LFATWT SFVTMTRIALGEFDN+YPLMVE++  AAF+II TYQTLQ ILLLNIVISILLD FQMV KRNS +AADTL QTVMTTLGRWR+RL     A+  R P +   SS R  S    + +  VKNP H + G +  RQR   ++  A G  A AV A  GVPVAPPG+     R V  +P           + K K   K++     + GGLTRGQRLA+SHRHYD+R AVEVLRRSPLPE+AVWRKMRQI+ AR   VS
Sbjct:   24 QGLVYSITTDIGVFNSGLNFNLCGMLAILGGPDVMTDAVRSVSLRFNTYNGQCDGLFSFVDITALFTLGGEVKMVTSVEVFSMPFFFGSSPAIVGRAIAMFAFGLMLVIYIGKDVLRAWREVRDGRHRLSMSLRHVPVTTATALNLVGDCVFLWNLVLWVNVAVTAAKFELIPTLSYNNASEQVRAFSEELALVALERWKRDAAAVAGSIFGLTRLFIMLRFHPRLSLVTDVLTASAVHLVHFFIMFFMVVGVYSNLVWVIFGPSSLLFATWTKSFVTMTRIALGEFDNIYPLMVEIDGAAAFMIIVTYQTLQCILLLNIVISILLDAFQMVQKRNSVVAADTLWQTVMTTLGRWRIRLTHVGFALVGRCPSVTRRSSPRGSSVGDDAGTTVVKNPMHDRHGGRKLRQRHQHTAPTAGGTSAAAVAAAAGVPVAPPGITGSSSRGVPLLP----------SSDKRKVSSKNRGGGATKRGGLTRGQRLAMSHRHYDLRTAVEVLRRSPLPEAAVWRKMRQIIGARLGWVS 543          
BLAST of mRNA_L-elsbetiae_contig545.13702.1 vs. uniprot
Match: A0A6H5KPV8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPV8_9PHAE)

HSP 1 Score: 165 bits (418), Expect = 5.610e-43
Identity = 118/256 (46.09%), Postives = 141/256 (55.08%), Query Frame = 0
Query:  480 MVEVNDGAAFIIIATYQTLQGILLLNIVISILLDGFQMVHKRNSAIAADTLRQTVMTTLGRWRLRLL-----------------------------------GAVFHRAPLLPLSSSCRNGSSPSPQVKNPAHGKLGSKRQRSSFSSAAGAGAGAV------VAGVPVAPPGVPRSVAAMPPPAFTTKASVGTVKWKFDIKSQ---VARNGGLTRGQRLALSHRHYDVRAAVEVLRRSPLPESAVWRKMRQIVAAR 691
            MV+++ GAAF+II TYQTLQ ILLLNIVISILLD FQMV  R+S +AADTL QTVMTTLGRWR+RL                                     A+ HR       SS R   + +  V+NP H + G  + R      A             V GVPVAPPG+  S +   P   T+       K K   K++     R GGLT GQRLA+SHRHY++ AAVEVLRRSPLPE+AVWRKMRQI+ AR
Sbjct:    1 MVDIDGGAAFMIIVTYQTLQCILLLNIVISILLDAFQMVQTRDSVVAADTLWQTVMTTLGRWRIRLTHMGFAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALVHRCSSGTRRSSDRGDDAGTTVVRNPMHDRHGGWKLRRRHQRTAPTXXXXXXXXXXXVTGVPVAPPGITGSSSRGAPSLPTSD------KRKVSSKNRGGGATRRGGLTGGQRLAMSHRHYELHAAVEVLRRSPLPEAAVWRKMRQIIGAR 250          
BLAST of mRNA_L-elsbetiae_contig545.13702.1 vs. uniprot
Match: D7FTQ6_ECTSI (Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTQ6_ECTSI)

HSP 1 Score: 87.0 bits (214), Expect = 2.800e-16
Identity = 45/111 (40.54%), Postives = 74/111 (66.67%), Query Frame = 0
Query:  405 MLRFHPRLSLVTDVLTASAVHLVHFFIMFFMVVAVYSNLGWVIFGPSLSLFATWTMSFVTMTRIALGEFDNMYPLMVEVNDGAAFIIIATYQTLQGILLLNIVISILLDGF 515
            ML FH R+S+VTD L+ ++ HL HF  +FF+V+  ++ L W++ G S   F+T   ++ ++TRI+LGE +N YP +++       +++  YQ L  +LLLN+VI+ILL+ F
Sbjct:   32 MLTFHKRMSIVTDTLSRASTHLDHFLFVFFLVILAFAALTWLLVGSSTKEFSTLEDAWQSVTRISLGESENFYPQILDAQPTVGPVVVVLYQVLGVVLLLNVVIAILLETF 142          
BLAST of mRNA_L-elsbetiae_contig545.13702.1 vs. uniprot
Match: A0A6H5L574_9PHAE (PKD_channel domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L574_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 1.590e-14
Identity = 48/135 (35.56%), Postives = 84/135 (62.22%), Query Frame = 0
Query:  405 MLRFHPRLSLVTDVLTASAVHLVHFFIMFFMVVAVYSNLGWVIFGPSLSLFATWTMSFVTMTRIALGEFDNMYPLMVEVNDGAAFIIIATYQTLQGILLLNIVISILLDGFQMVHKRNSAIAADTLRQTVMTTLG 539
            ML FH R+S+VTD L+ ++ HL HF  +FF+V+  ++ L W++ G S   F+T   ++ ++ RI+LGE +N YP +++       +++  YQ L  +LLLN+VI+ILL+ ++ V   +     DT+ Q+ +  +G
Sbjct:    1 MLTFHKRMSIVTDTLSRASTHLNHFLFVFFLVILAFAALTWLLVGSSTKEFSTLEDAWRSVIRISLGESENFYPQILDAQPTVGPVVVVLYQVLGVVLLLNVVIAILLEAYRGVA--SGMHGEDTIFQSFIAFVG 133          
BLAST of mRNA_L-elsbetiae_contig545.13702.1 vs. uniprot
Match: A0A1Q9DKM7_SYMMI (Polycystin-2 n=4 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9DKM7_SYMMI)

HSP 1 Score: 67.0 bits (162), Expect = 1.170e-7
Identity = 65/206 (31.55%), Postives = 103/206 (50.00%), Query Frame = 0
Query:  348 VAATASKFELIPTLSYNNAAEQVRAFSDDLALVALERWKRDAAAVAGSIFGLARLF----IMLR----FH--PRLSLVTDVLTASAVHLVHFFIMFFMVVAVYSNLGWVIFGPSLSLFATWTMSFVTMTRIALGEFDNMYPLMVEVNDGAAFIIIATYQTLQGILLLNIVISILLDGFQMVHKRNSAIAADTLRQTVMTTLGRWRL 543
            VAAT+S+ E +      N   +  +   DL   A E     +   A + F +  LF    +MLR    FH  PRL++VT  +  ++  L+HFFI+   V    +  G+++FG  +  F+TW    +T  R  LGE+D  +  M  V    A I +  +  L  +LLLN+V++IL+D +Q+V  + S +   T+ Q +   L R RL
Sbjct:  440 VAATSSQLENVLQPDVQNQTREELSARSDLVFQATE-----SLVSAEADFRITLLFFPMLVMLRLFKSFHAQPRLAIVTKTIITASQDLLHFFIVLLSVYTCMAVFGYLLFGQDVENFSTWDRVCITCFRALLGEWD--WEEMETVGRVLAAIWLWCFVVLVVLLLLNMVLAILMDAYQVVKSKASVMV--TVPQQISEMLRRRRL 636          
BLAST of mRNA_L-elsbetiae_contig545.13702.1 vs. uniprot
Match: A0A812IFP8_9DINO (Rsph3a protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812IFP8_9DINO)

HSP 1 Score: 63.5 bits (153), Expect = 1.180e-6
Identity = 48/143 (33.57%), Postives = 77/143 (53.85%), Query Frame = 0
Query:  401 RLFIMLRFHPRLSLVTDVLTASAVHLVHFFIMFFMVVAVYSNLGWVIFGPSLSLFATWTMSFVTMTRIALGEFDNMYPLMVEVNDGAAFIIIATYQTLQGILLLNIVISILLDGFQMVHKRNSAIAADTLRQTVMTTLGRWRL 543
            RLF      PRL++VT  +  ++  L+HFFI+   V    +  G+++FG  +  F+TW    +T  R  LGE+D  +  M  V    A I +  +  L  +LLLN+V++IL+D +Q+V  + S +   T+ Q +   L R RL
Sbjct:    6 RLFKSFHAQPRLAIVTKTIITASQDLLHFFIVLLSVYTCMAVFGYLLFGQDVEDFSTWDRVCITCFRALLGEWD--WEEMETVGRVLAAIWLWCFVVLVVLLLLNMVLAILMDAYQVVKSKASVMV--TVPQQISEMLRRRRL 144          
BLAST of mRNA_L-elsbetiae_contig545.13702.1 vs. uniprot
Match: A0A7S0MWE4_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MWE4_9CRYP)

HSP 1 Score: 59.3 bits (142), Expect = 1.860e-5
Identity = 43/154 (27.92%), Postives = 77/154 (50.00%), Query Frame = 0
Query:  375 DDLALVALERWKRDAAAVAGSIFG------------LARLFIMLRFHPRLSLVTDVLTASAVHLVHFFIMFFMVVAVYSNLGWVIFGPSLSLFATWTMSFVTM-TRIALGEFDNMYPLMVEVNDGAAFIIIATYQTLQGILLLNIVISILLDGF 515
            D++  V   R++R     AG + G            L R F   RF PRL+++   L+ +A+ L+HF IMF  V   Y+ +  ++FG  ++ F+T   S  T+   + +G     Y  +  V    AF+   T+  L  ++L+N++++IL+D +
Sbjct:  371 DNIIKVPSNRYERVLETAAGLVEGQYYINFTNIVLMLIRCFKYYRFQPRLAIINKTLSIAAIDLLHFVIMFVTVFVAYAVMANILFGTEINNFSTLYRSITTLFIWVLVGGAPTYYAQITHVAPTMAFVFYLTFMLLVFVVLMNLLLAILVDAY 524          
BLAST of mRNA_L-elsbetiae_contig545.13702.1 vs. uniprot
Match: A0A7S0U3P7_HEMAN (Hypothetical protein n=3 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0U3P7_HEMAN)

HSP 1 Score: 59.7 bits (143), Expect = 1.970e-5
Identity = 90/337 (26.71%), Postives = 158/337 (46.88%), Query Frame = 0
Query:  212 LSILGGPDVMTAAVRTVSLRFNTFNGQRDGLFSSVDITARFTLGGEVLIDTNVQVFSMPYFFDDSPWIVCRAVAMF-AFALLLARYLVKDLKQALRELKDGRHIISISLRKIPLNTATVLNLVGDGVFMW-NLVLWTTVAATASKFELIPTLSYNNAAEQV--RAFSDDLALVALER-------WKRDAAA-VAGSIFGL-ARLFIMLRFHPRLSLVTDVLTASAVHLVHFFIMFFMVVAVYSNLGWVIFGPSLSLFATWTMS-----FVTMTRIALGEFDNMYPLMVEVNDGAAFIIIATYQTLQGILLLNIVISILLDGFQMVHKRNSAIAADTL 530
            +S L     +T    ++S+   TFN Q    F+    T  F  GG +  +  V  FSM     D+  IV   +  F  F +L+A     +LK+     K+G+ +  ++     L+ AT+  + G  + +  +  ++ +    A + +L   L    A  +V      +++A + L           +D+ A VA ++  L AR F ML F  R+ LVT     SA  + HF I+F  VV +Y+ L  +++G  +  F T  MS     F T+T I + +++ M  +   + D  A I   T+  L  ++LLNI ++IL++G+ +V  + +A  ++TL
Sbjct:  513 VSFLQEGKFLTNQTESLSVEIGTFNPQHRA-FAWSKATFTFGTGGLIEAEYLVDSFSMADLEADNVEIVLFFIVCFLCFGMLIA-----ELKEMWGCWKEGKLLSYLTDIWNLLDMATICFVPGSLLLILVDARMFISTLELAERGDLPRVLRNPGAVARVFQTVLEEEMAFLDLRHRIQMYIAQSQDSRAWVAVNVLLLMARFFKMLHFQGRMGLVTRTFANSATDIAHFTIIFAFVVVMYAILAQLMYGTQMPEFRTLGMSMMMLVFTTLT-IGIEDYNRMLTMSPHM-DYIATIFWLTFMFLSTVVLLNIFLAILVEGYAVV--KETATNSETL 839          
BLAST of mRNA_L-elsbetiae_contig545.13702.1 vs. uniprot
Match: A0A6U4MJF6_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4MJF6_HEMAN)

HSP 1 Score: 57.4 bits (137), Expect = 9.530e-5
Identity = 41/140 (29.29%), Postives = 76/140 (54.29%), Query Frame = 0
Query:  400 ARLFIMLRFHPRLSLVTDVLTASAVHLVHFFIMFFMVVAVYSNLGWVIFGPSLSLFATWTMSFVTMTRIALGEFDNMYPLMVEVNDGA-AFIIIATYQTLQGILLLNIVISILLDGFQMVHKRNSAIAADTLRQTVMTTL 538
            AR F +L F  R+ L+T   + +   ++HF ++FF+V+  Y  +G ++FG  LS + T   + +T+ +  L   ++ Y  M++ N+     I   ++  L  I LLNI ++IL+D F  V + +S   ++TL   ++  L
Sbjct:  498 ARFFKILHFQGRMGLITRTFSTALQDIIHFGMIFFLVIFAYGVMGVLLFGHQLSEYRTMGTAMMTLIQTTLAISNDDYARMLDSNNNIMTTIFYLSFLFLSTITLLNIFLAILIDAFSTVKESSSH--SETLMSGLLEVL 635          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig545.13702.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7G2W7_ECTSI9.250e-22269.06Transient Receptor Potential Channel n=1 Tax=Ectoc... [more]
A0A6H5KPV8_9PHAE5.610e-4346.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTQ6_ECTSI2.800e-1640.54Transient Receptor Potential Channel n=1 Tax=Ectoc... [more]
A0A6H5L574_9PHAE1.590e-1435.56PKD_channel domain-containing protein n=1 Tax=Ecto... [more]
A0A1Q9DKM7_SYMMI1.170e-731.55Polycystin-2 n=4 Tax=Symbiodinium TaxID=2949 RepID... [more]
A0A812IFP8_9DINO1.180e-633.57Rsph3a protein n=1 Tax=Symbiodinium sp. CCMP2592 T... [more]
A0A7S0MWE4_9CRYP1.860e-527.92Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
A0A7S0U3P7_HEMAN1.970e-526.71Hypothetical protein n=3 Tax=Hemiselmis andersenii... [more]
A0A6U4MJF6_HEMAN9.530e-529.29Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013122Polycystin cation channel, PKD1/PKD2PFAMPF08016PKD_channelcoord: 226..517
e-value: 7.9E-11
score: 41.3
NoneNo IPR availablePANTHERPTHR10877POLYCYSTIN-RELATEDcoord: 223..537
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 471..489
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 441..451
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 490..512
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 407..417
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 299..388
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 513..696
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 452..470
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 277..298
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 418..440
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..276
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 389..406
NoneNo IPR availableTMHMMTMhelixcoord: 447..469
NoneNo IPR availableTMHMMTMhelixcoord: 276..298
NoneNo IPR availableTMHMMTMhelixcoord: 489..511
NoneNo IPR availableTMHMMTMhelixcoord: 389..408
NoneNo IPR availableTMHMMTMhelixcoord: 418..440

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig545contigL-elsbetiae_contig545:25271..36821 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig545.13702.1mRNA_L-elsbetiae_contig545.13702.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig545 25271..36821 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig545.13702.1 ID=prot_L-elsbetiae_contig545.13702.1|Name=mRNA_L-elsbetiae_contig545.13702.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=696bp
SCPLCYGAERASVVGEAGSLGDDFCGVCTGLEFCFQGRCADYLDLIPNIG
EVKGSNASLVKASSNSDCLNDPSFESGDCADFWCNRKYWIRVGTTSVVAI
APLEGDGEVVLQPTGRGYVANKNKMIGALLLEWSYYKEGECQNTYSPDFY
GPCYQDEGSFENVLEEVREAQMNPLILVDVKKGLYGEGLVYSITTDTGVF
NTGLNLNLCGMLSILGGPDVMTAAVRTVSLRFNTFNGQRDGLFSSVDITA
RFTLGGEVLIDTNVQVFSMPYFFDDSPWIVCRAVAMFAFALLLARYLVKD
LKQALRELKDGRHIISISLRKIPLNTATVLNLVGDGVFMWNLVLWTTVAA
TASKFELIPTLSYNNAAEQVRAFSDDLALVALERWKRDAAAVAGSIFGLA
RLFIMLRFHPRLSLVTDVLTASAVHLVHFFIMFFMVVAVYSNLGWVIFGP
SLSLFATWTMSFVTMTRIALGEFDNMYPLMVEVNDGAAFIIIATYQTLQG
ILLLNIVISILLDGFQMVHKRNSAIAADTLRQTVMTTLGRWRLRLLGAVF
HRAPLLPLSSSCRNGSSPSPQVKNPAHGKLGSKRQRSSFSSAAGAGAGAV
VAGVPVAPPGVPRSVAAMPPPAFTTKASVGTVKWKFDIKSQVARNGGLTR
GQRLALSHRHYDVRAAVEVLRRSPLPESAVWRKMRQIVAARFVAVS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013122PKD1_2_channel