mRNA_L-elsbetiae_contig545.13700.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig545.13700.1 vs. uniprot
Match: D7G2W3_ECTSI (Glutathione peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2W3_ECTSI) HSP 1 Score: 417 bits (1071), Expect = 2.180e-139 Identity = 220/275 (80.00%), Postives = 240/275 (87.27%), Query Frame = 2 Query: 320 STRLEFGAGVGAAAAAIMLGGLPA---LAEDTSSAVAGEAPAAAGVAEAAQESSPEVXXXXXXXXASAAETRP-LRDLGFEVPYTGKSLPLSKFLGSRATLVVNPKIDDPESLHQMPGLTKLASEYSKDGLNVLLFPTEQGTFEADEDRVVRIKLYQFYGFGQFPKAVVFDKIDIVGNTIHPFYRYLCRGLKNPNGIARITLNYEKFLLDGNGKVVRRYPRKLEAADFEADVKAVMAGDPLPAENRDYKLSWLKADQEASKSEYAFKLGLNYYNN 1132 STRLEFG+G+GAAAAAI++GG A LAEDT+ A A AG AA +SP +A ET+P LR+LGFEVPYTGKS+PL+KFLGSRATLVVN K+DDPE+LHQMPG+TKLASEYSKDGLNVLLFPT+QGTFEADEDRV+RIK YQFYGFGQ+PKAVVFDKIDIVGNTIHPFYRYLCR LKNPNGIARITLNYEKFLLD +GKVVRRYPRKLEAADFEADVKAV+AGDPLPAENRDYKLSWLKADQEA+KSEYAFKLGLNYYNN Sbjct: 27 STRLEFGSGLGAAAAAIVIGGTSARGALAEDTTGDAATAVVATAGAEGAAPAASP-----------AATETKPSLRELGFEVPYTGKSVPLNKFLGSRATLVVNGKLDDPEALHQMPGITKLASEYSKDGLNVLLFPTDQGTFEADEDRVIRIKFYQFYGFGQYPKAVVFDKIDIVGNTIHPFYRYLCRALKNPNGIARITLNYEKFLLDQDGKVVRRYPRKLEAADFEADVKAVIAGDPLPAENRDYKLSWLKADQEATKSEYAFKLGLNYYNN 290
BLAST of mRNA_L-elsbetiae_contig545.13700.1 vs. uniprot
Match: A0A835Z1R8_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1R8_9STRA) HSP 1 Score: 266 bits (679), Expect = 4.840e-82 Identity = 121/194 (62.37%), Postives = 152/194 (78.35%), Query Frame = 2 Query: 551 VPYTGKSLPLSKFLGSRATLVVNPKIDDPESLHQMPGLTKLASEYSKDGLNVLLFPTEQGTFEADEDRVVRIKLYQFYGFGQFPKAVVFDKIDIVGNTIHPFYRYLCRGLKNPNGIARITLNYEKFLLDGNGKVVRRYPRKLEAADFEADVKAVMAGDPLPAENRDYKLSWLKADQEASKSEYAFKLGLNYYNN 1132 +PY GK +P+ K LG +ATLV+N K+DDP ++ QMP + +A++Y ++GL+V++ PT+QG FEADEDRVV+IK YQFYGFGQ+P AVV DK+DIVGNT HP Y+YLCR LKNPNGIARITLN+EKFLL +G+ +RRYPR+L E D+ A + G PLP R Y SW+KA EA +SEYAFKLGLNYYNN Sbjct: 1 MPYNGKQIPVGKLLGPKATLVINGKLDDPAAMQQMPDIVNMANKYGREGLHVIVVPTDQGYFEADEDRVVKIKFYQFYGFGQYPVAVVTDKVDIVGNTAHPLYKYLCRSLKNPNGIARITLNFEKFLLGADGRPLRRYPRQLALGLVEDDIAAAVRGAPLPPPGRPYATSWVKAQAEAERSEYAFKLGLNYYNN 194
BLAST of mRNA_L-elsbetiae_contig545.13700.1 vs. uniprot
Match: A0A7S3XXI6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXI6_HETAK) HSP 1 Score: 263 bits (673), Expect = 2.280e-79 Identity = 124/196 (63.27%), Postives = 155/196 (79.08%), Query Frame = 2 Query: 545 FEVPYTGKSLPLSKFLGSRATLVVNPKIDDPESLHQMPGLTKLASEYSKDGLNVLLFPTEQGTFEADEDRVVRIKLYQFYGFGQFPKAVVFDKIDIVGNTIHPFYRYLCRGLKNPNGIARITLNYEKFLLDGNGKVVRRYPRKLEAADFEADVKAVMAGDPLPAENRDYKLSWLKADQEASKSEYAFKLGLNYYNN 1132 FEVPY GK +PLSKFLG +ATLVVN KIDDP SL QMPGL L + GL + FPT+QG FE DE+ V+RIK YQ YG+GQ+P +++FDKID+VGNTIHPFY++LC LKNP GI R+TLNYEKFLLDG G+VVRRYPRK A + E D+K ++AG+PLP E+ +K +W++A +EA+ S+YAFK GLNYY+N Sbjct: 114 FEVPYNGKQVPLSKFLG-QATLVVNIKIDDPVSLQQMPGLVALTQTLGRKGLRIWCFPTDQGYFEPDENDVIRIKNYQIYGYGQYPISMLFDKIDVVGNTIHPFYKFLCSSLKNPYGIRRVTLNYEKFLLDGEGRVVRRYPRKYPATEMEKDLKPLLAGEPLPEESPAFKKAWVEAKREAATSQYAFKKGLNYYDN 308
BLAST of mRNA_L-elsbetiae_contig545.13700.1 vs. uniprot
Match: A0A7S2UVM6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVM6_9STRA) HSP 1 Score: 255 bits (651), Expect = 2.290e-76 Identity = 123/210 (58.57%), Postives = 160/210 (76.19%), Query Frame = 2 Query: 509 SAAETRPLRDL-GFEVPYTGKSLPLSKFL-GSRATLVVNPKIDDPESLHQMPGLTKLASEYSKDGLNVLLFPTEQGTFEADEDRVVRIKLYQFYGFGQFPKAVVFDKIDIVGNTIHPFYRYLCRGLKNPNGIARITLNYEKFLLDGNGKVVRRYPRKLEAADFEADVKAVMAGDPLPAENRDYKLSWLKADQEASKSEYAFKLGLNYYNN 1132 +AAE +P++ + FE PY +PL+KFL ++A LVVN K+DDP SL QMP L +LA+ YSKDGL +L+FPT+QGTFE D+D VRIK YQFYGFGQ+P A V DKIDIVG + HP Y++LC L NP G+ RITLNYEKFLL+ +G VRRYPRK+E AD+E DV+AV+ G+ LP E+ ++ +W+ A +EA+ SEYAF+ LNYY+N Sbjct: 94 AAAEEKPVKRITDFEAPYNRNPVPLTKFLKNAKAILVVNSKLDDPVSLQQMPPLVELATRYSKDGLRILVFPTDQGTFEPDDDETVRIKNYQFYGFGQYPVATVMDKIDIVGTSAHPIYKFLCSSLPNPYGVKRITLNYEKFLLNADGVPVRRYPRKMELADYEKDVQAVLKGEQLPDESLAFRKAWVAAKKEAAMSEYAFRKNLNYYDN 303
BLAST of mRNA_L-elsbetiae_contig545.13700.1 vs. uniprot
Match: W7TC45_9STRA (Glutathione peroxidase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TC45_9STRA) HSP 1 Score: 244 bits (623), Expect = 1.070e-71 Identity = 121/194 (62.37%), Postives = 144/194 (74.23%), Query Frame = 2 Query: 545 FEVPYTGKSLPLSKFLGSRATLVVNPKIDDPESLHQMPGLTKLASEYSKDGLNVLLFPTEQGTFEADEDRVVRIKLYQFYGFGQFPKAVVFDKIDIVGNTIHPFYRYLCRGLKNPNGIARITLNYEKFLLDGNGKVVRRYPRKLEAADFEADVKAVMAGDPLPAENRDYKLSWLKADQEASKSEYAFKLGLNYY 1126 + VPY G +PL F G +A +V N K DDPESL Q+PGLT L +YSK GL V +F TEQGTFE DEDRV+RIK YQ YGFGQ+P ++VFDKIDIVG PFY++LC+ L+NPN IARITLN+EKFLLD NG+ VRRYPR+ A D E DVKAV+AG+PLP + +W A EA +SEYAFK GLNYY Sbjct: 141 YAVPYDGVRVPLGNFRG-KAVVVCNAKTDDPESLAQIPGLTYLTGKYSKKGLKVWVFTTEQGTFETDEDRVIRIKYYQQYGFGQYPNSLVFDKIDIVGKRADPFYKFLCKTLRNPNKIARITLNFEKFLLDANGRPVRRYPRRYTAYDMEEDVKAVLAGEPLPPPSPKLIKAWRDAYVEAERSEYAFKKGLNYY 333
BLAST of mRNA_L-elsbetiae_contig545.13700.1 vs. uniprot
Match: A0A7S2CSS9_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CSS9_9STRA) HSP 1 Score: 216 bits (549), Expect = 5.560e-62 Identity = 104/194 (53.61%), Postives = 136/194 (70.10%), Query Frame = 2 Query: 545 FEVPYTGKSLPLSKFLGSRATLVVNPKIDDPESLHQMPGLTKLASEYSKDGLNVLLFPTEQGTFEADEDRVVRIKLYQFYGFGQFPKAVVFDKIDIVGNTIHPFYRYLCRGLKNPNGIARITLNYEKFLLDGNGKVVRRYPRKLEAADFEADVKAVMAGDPLPAENRDYKLSWLKADQEASKSEYAFKLGLNYY 1126 F+VPY K +P SKF G +A +V N K DDPE+L Q P L L +Y DGL +L FPT+QG +E + +VR + Q +GFGQFP AVVFDK+DI+G+T HP Y YL R L NPNG + +TLN+EKFL+DG+GK VRRYPRK E D++A++AGDPLP E+ + +W A++EA KSEY+F+ G N Y Sbjct: 50 FDVPYKRKPVPWSKFRG-KAMIVCNVKNDDPEALKQYPALAYLNKKYYTDGLRILAFPTDQGWYEPEVSEIVRQRALQAFGFGQFPYAVVFDKVDILGSTSHPLYNYLMRALPNPNGKSSVTLNFEKFLVDGSGKPVRRYPRKYSGFQMERDIEALLAGDPLPEESDAFLTAWKDAEREAIKSEYSFRSGYNVY 242
BLAST of mRNA_L-elsbetiae_contig545.13700.1 vs. uniprot
Match: A0A7S0E1J0_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E1J0_9CRYP) HSP 1 Score: 204 bits (520), Expect = 1.370e-57 Identity = 101/195 (51.79%), Postives = 132/195 (67.69%), Query Frame = 2 Query: 551 VPYTGKSLPLSKFLGSRATLVVNPKIDDPESLHQMPGLTKLASEYSKDGLNVLLFPTEQGTFEADEDRVVRIKLYQFYGFGQFPKA--VVFDKIDIVGNTIHPFYRYLCRGLKNPNGIARITLNYEKFLLDGNGKVVRRYPRKLEAADFEADVKAVMAGDPLPAENRDYKLSWLKADQEASKSEYAFKLGLNYYN 1129 +P GK LSK +GS+AT+V+N K+DDPE++ Q+P L L +Y+ GLN + FPT+QG +E D+ VRIK+ Q YG K VV DK DIVG HP YRY+ L NPN I RITLNYEKFLLD NGKV+RRYPR A E DVKAV+AG PLP + ++ +W +AD+EA++S Y+F+ N+Y+ Sbjct: 39 IPVNGKQKSLSKLIGSKATIVMNIKLDDPETVTQIPALKTLVLQYADQGLNAICFPTDQGDYEPDDSATVRIKVAQQYGMKSSVKGPIVVTDKTDIVGKFTHPLYRYMTTNLPNPNNITRITLNYEKFLLDANGKVLRRYPRLWSAERMEKDVKAVLAGQPLPPMDPQWQFAWKEADKEATRSIYSFRKHYNFYD 233
BLAST of mRNA_L-elsbetiae_contig545.13700.1 vs. uniprot
Match: A0A0G4FMZ4_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FMZ4_VITBC) HSP 1 Score: 201 bits (510), Expect = 1.850e-55 Identity = 99/198 (50.00%), Postives = 137/198 (69.19%), Query Frame = 2 Query: 542 GFEVPYTGKSLPLSKFLGSRATLVVNPKIDDPESLHQMPGLTKLASEYSKDGLNVLLFPTEQGTFEADEDRVVRIKLYQFYGFGQFPKAVVFDKIDIVGNTIHPFYRYLCRGLKNP---NGIARITLNYEKFLLDGNGKVVRRYPRKLEAADFEADVKAVMAGDPLPAENRDYKLSWLKADQEASKSEYAFKLGLNYY 1126 G E+P KS+P+ KFLG RATLVVN K+DDPES Q+ L L +Y K GL V++FPT QG E D D +RI++YQ +GFGQ+P+AV FDK+D++G HP Y YL R L+NP I+LNYEKFLLDG+G VRRYPR+ + + E D++A++ G L A +++++L+WLKA++E K YA++ NY+ Sbjct: 126 GLEIPLRKKSIPIEKFLGRRATLVVNIKLDDPES-RQIGELKYLVDKYWKQGLTVMMFPTLQGWAEPDTDDTLRIRVYQTFGFGQYPQAVCFDKVDVIGPQAHPLYTYLGRQLRNPIAGKSWENISLNYEKFLLDGDGVPVRRYPRQWDPLEIEYDLRALLDGRQLGAPSKEFQLAWLKAERERKKDTYAYRENYNYF 322
BLAST of mRNA_L-elsbetiae_contig545.13700.1 vs. uniprot
Match: L1JD48_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JD48_GUITC) HSP 1 Score: 197 bits (502), Expect = 4.620e-55 Identity = 98/195 (50.26%), Postives = 130/195 (66.67%), Query Frame = 2 Query: 551 VPYTGKSLPLSKFLGSRATLVVNPKIDDPESLHQMPGLTKLASEYSKDGLNVLLFPTEQGTFEADEDRVVRIKLYQFYGFGQFPKA--VVFDKIDIVGNTIHPFYRYLCRGLKNPNGIARITLNYEKFLLDGNGKVVRRYPRKLEAADFEADVKAVMAGDPLPAENRDYKLSWLKADQEASKSEYAFKLGLNYYN 1129 +P GK LSK GS+AT+V+N K+DDPE++ Q+P L L +Y+ GLN + FPT+QG +E D+ VRIK+ Q YG K +V DK DIVG HP YRY+ L NPN I RITLNYEKFLLD +G+V+RRYPR A E DVKAV+AG PLP + + +W +AD+EA++S Y+F+ N+Y+ Sbjct: 33 IPVNGKQKTLSKLKGSKATIVMNIKLDDPETVTQIPALKTLVLQYADQGLNAICFPTDQGDYEPDDSATVRIKVAQQYGMKSSLKGPIIVTDKTDIVGKFTHPLYRYMTTNLPNPNNITRITLNYEKFLLDADGQVLRRYPRLWSAERMEKDVKAVLAGQPLPPVDPQWLFAWKEADKEATRSIYSFRKHYNFYD 227
BLAST of mRNA_L-elsbetiae_contig545.13700.1 vs. uniprot
Match: A0A6U4LLP0_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4LLP0_HEMAN) HSP 1 Score: 200 bits (509), Expect = 6.360e-55 Identity = 97/196 (49.49%), Postives = 133/196 (67.86%), Query Frame = 2 Query: 548 EVPYTGKSLPLSKFLGSRATLVVNPKIDDPESLHQMPGLTKLASEYSKDGLNVLLFPTEQGTFEADEDRVVRIKLYQFYGFGQFPKA--VVFDKIDIVGNTIHPFYRYLCRGLKNPNGIARITLNYEKFLLDGNGKVVRRYPRKLEAADFEADVKAVMAGDPLPAENRDYKLSWLKADQEASKSEYAFKLGLNYYN 1129 ++PY G+ PL K LG AT+V+N K+DDPE+ Q+P LT L +YS+ GLN + PT+QG +E D+ VRIK+ Q +G K VV DK DIVG HP Y+Y+ NPN + RITLNYEKFLLDG G V+RRYPR+ + E DVKAV++GDPL ++ ++L+W +AD+EA++S Y+F+ NYY+ Sbjct: 125 DIPYNGRRKPLRKMLGETATIVMNIKLDDPETNRQIPALTTLVEKYSQQGLNAICVPTDQGDYEPDDSTTVRIKVKQQFGMSSALKGPIVVTDKADIVGKFAHPLYKYMTTHAPNPNNVTRITLNYEKFLLDGEGNVLRRYPRQWGSDLIEKDVKAVISGDPLEPVSKKWQLAWSEADKEATRSMYSFRKHYNYYD 320 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig545.13700.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig545.13700.1 >prot_L-elsbetiae_contig545.13700.1 ID=prot_L-elsbetiae_contig545.13700.1|Name=mRNA_L-elsbetiae_contig545.13700.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=364bp MTYTSTMTASVLALALACFRETSAFVAPGTGAAGLGIGVDMHRSHRIEQPback to top mRNA from alignment at L-elsbetiae_contig545:12178..20064- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig545.13700.1 ID=mRNA_L-elsbetiae_contig545.13700.1|Name=mRNA_L-elsbetiae_contig545.13700.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7887bp|location=Sequence derived from alignment at L-elsbetiae_contig545:12178..20064- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig545:12178..20064- >mRNA_L-elsbetiae_contig545.13700.1 ID=mRNA_L-elsbetiae_contig545.13700.1|Name=mRNA_L-elsbetiae_contig545.13700.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2184bp|location=Sequence derived from alignment at L-elsbetiae_contig545:12178..20064- (Laminarionema elsbetiae ELsaHSoW15)back to top |