prot_L-elsbetiae_contig5448.13697.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5448.13697.1
Unique Nameprot_L-elsbetiae_contig5448.13697.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length141
Homology
BLAST of mRNA_L-elsbetiae_contig5448.13697.1 vs. uniprot
Match: D7FUU6_ECTSI (Small heat shock protein heat shock protein 20 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUU6_ECTSI)

HSP 1 Score: 75.9 bits (185), Expect = 3.250e-14
Identity = 39/67 (58.21%), Postives = 49/67 (73.13%), Query Frame = 0
Query:    1 MNDIFESMEWDMLAPWGLAFRFPGKGGAFPAPPSSNDIVGNGGFS-NMNVDFHETSNGFELIADLPG 66
            +ND+F S+E +MLAPWGLA RFP     FP  P+S  + G+G  S  M++DFHET +GFELIADLPG
Sbjct:   20 INDVFGSIEREMLAPWGLASRFPTTRDMFPTFPTS--LFGDGSRSLGMSLDFHETKDGFELIADLPG 84          
BLAST of mRNA_L-elsbetiae_contig5448.13697.1 vs. uniprot
Match: A0A6H5KKF0_9PHAE (HSP20 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKF0_9PHAE)

HSP 1 Score: 62.8 bits (151), Expect = 1.790e-9
Identity = 34/56 (60.71%), Postives = 40/56 (71.43%), Query Frame = 0
Query:   12 MLAPWGLAFRFPGKGGAFPAPPSSNDIVGNGGFS-NMNVDFHETSNGFELIADLPG 66
            MLAPWGLAFRFP      P+  SS  +  +G  S +MN+DFHET +GFELIADLPG
Sbjct:    1 MLAPWGLAFRFPTARDMVPSVSSS--LFRDGSRSLDMNLDFHETKDGFELIADLPG 54          
BLAST of mRNA_L-elsbetiae_contig5448.13697.1 vs. uniprot
Match: A0A6H5JPQ3_9PHAE (HSP20 protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPQ3_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 2.690e-8
Identity = 32/56 (57.14%), Postives = 38/56 (67.86%), Query Frame = 0
Query:   12 MLAPWGLAFRFPGKGGAFPAPPSSNDIVGNGGFS-NMNVDFHETSNGFELIADLPG 66
            MLAPWG A RFP      P+  SS  +  +G  S +MN+DFHET +GFELIADLPG
Sbjct:    1 MLAPWGFASRFPTARDMVPSVSSS--LFRDGSRSLDMNLDFHETKDGFELIADLPG 54          
BLAST of mRNA_L-elsbetiae_contig5448.13697.1 vs. uniprot
Match: A0A6H5JFM4_9PHAE (HSP20 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFM4_9PHAE)

HSP 1 Score: 53.1 bits (126), Expect = 1.310e-5
Identity = 36/105 (34.29%), Postives = 47/105 (44.76%), Query Frame = 0
Query:    1 MNDIFESMEWDMLAPWGLAFRFPGKG--------------------------------------GAFPAPPSSNDIVGNGGFS-NMNVDFHETSNGFELIADLPG 66
            ++D+F S+E +MLAPWGLA RFP                                              P  S+ +  +G  S +MN+DFHET +GFELIADLPG
Sbjct:    5 IDDVFGSIEREMLAPWGLASRFPTASHMRYSTLRVHTKXXXXXXXXXXXXXXXXXXXXXXXXXXXRDMVPSVSSSLFRDGSRSLDMNLDFHETKDGFELIADLPG 109          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5448.13697.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FUU6_ECTSI3.250e-1458.21Small heat shock protein heat shock protein 20 n=1... [more]
A0A6H5KKF0_9PHAE1.790e-960.71HSP20 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
A0A6H5JPQ3_9PHAE2.690e-857.14HSP20 protein (Fragment) n=1 Tax=Ectocarpus sp. CC... [more]
A0A6H5JFM4_9PHAE1.310e-534.29HSP20 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5448contigL-elsbetiae_contig5448:1895..2723 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5448.13697.1mRNA_L-elsbetiae_contig5448.13697.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5448 1885..2732 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5448.13697.1 ID=prot_L-elsbetiae_contig5448.13697.1|Name=mRNA_L-elsbetiae_contig5448.13697.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=141bp
MNDIFESMEWDMLAPWGLAFRFPGKGGAFPAPPSSNDIVGNGGFSNMNVD
FHETSNGFELIADLPGCLGGCGQRIRRADGVGRAQEREGRDGRRRGPQEE
VPLRGAFVRQDDPFCSSPGDGGHRQRLRWLHLRGLDRNFP*
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