prot_L-elsbetiae_contig5443.13689.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5443.13689.1
Unique Nameprot_L-elsbetiae_contig5443.13689.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length42
Homology
BLAST of mRNA_L-elsbetiae_contig5443.13689.1 vs. uniprot
Match: D7FH97_ECTSI (Similar to chromosome fragility associated gene 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH97_ECTSI)

HSP 1 Score: 71.2 bits (173), Expect = 2.410e-13
Identity = 30/38 (78.95%), Postives = 36/38 (94.74%), Query Frame = 0
Query:    5 QYDWIPYSDDD-DEDSRLCNMAMLCGPPGVGKTSAVYG 41
            +YDW+ +SD++ DED+RLCNMAMLCGPPGVGKTSAVYG
Sbjct:  857 EYDWVRFSDEEEDEDARLCNMAMLCGPPGVGKTSAVYG 894          
BLAST of mRNA_L-elsbetiae_contig5443.13689.1 vs. uniprot
Match: UPI0014585F3B (ATPase family AAA domain-containing protein 5-like isoform X1 n=2 Tax=Pecten maximus TaxID=6579 RepID=UPI0014585F3B)

HSP 1 Score: 49.3 bits (116), Expect = 1.330e-5
Identity = 19/25 (76.00%), Postives = 21/25 (84.00%), Query Frame = 0
Query:   17 EDSRLCNMAMLCGPPGVGKTSAVYG 41
            ED RLCN AMLCGP G+GKT+ VYG
Sbjct: 1073 EDDRLCNTAMLCGPSGIGKTATVYG 1097          
BLAST of mRNA_L-elsbetiae_contig5443.13689.1 vs. uniprot
Match: A0A210QA61_MIZYE (ATPase family AAA domain-containing protein 5 n=2 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210QA61_MIZYE)

HSP 1 Score: 48.1 bits (113), Expect = 3.420e-5
Identity = 18/25 (72.00%), Postives = 22/25 (88.00%), Query Frame = 0
Query:   17 EDSRLCNMAMLCGPPGVGKTSAVYG 41
            E+ RLCN AMLCGP G+GKT++VYG
Sbjct: 1071 EEDRLCNTAMLCGPSGIGKTASVYG 1095          
BLAST of mRNA_L-elsbetiae_contig5443.13689.1 vs. uniprot
Match: A0A8D0BEM7_9SAUR (ATPase_AAA_core domain-containing protein n=1 Tax=Salvator merianae TaxID=96440 RepID=A0A8D0BEM7_9SAUR)

HSP 1 Score: 47.4 bits (111), Expect = 6.410e-5
Identity = 19/34 (55.88%), Postives = 25/34 (73.53%), Query Frame = 0
Query:    7 DWIPYSDDDDEDSRLCNMAMLCGPPGVGKTSAVY 40
            D+  Y  D +E+S LCN  +L GPPG+GKT+AVY
Sbjct:  780 DFKDYGSDSEEESVLCNTVLLTGPPGIGKTAAVY 813          
BLAST of mRNA_L-elsbetiae_contig5443.13689.1 vs. uniprot
Match: F6ZIX7_MONDO (AAA domain-containing protein n=3 Tax=Didelphinae TaxID=126287 RepID=F6ZIX7_MONDO)

HSP 1 Score: 47.0 bits (110), Expect = 8.760e-5
Identity = 22/40 (55.00%), Postives = 28/40 (70.00%), Query Frame = 0
Query:    1 DNKYQYDWIPYSDDDDEDSRLCNMAMLCGPPGVGKTSAVY 40
            D  +  D+   SDD+DE S LCN  ++ GPPGVGKT+AVY
Sbjct: 1138 DLSFSMDFKDLSDDEDESS-LCNTVLITGPPGVGKTAAVY 1176          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5443.13689.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FH97_ECTSI2.410e-1378.95Similar to chromosome fragility associated gene 1 ... [more]
UPI0014585F3B1.330e-576.00ATPase family AAA domain-containing protein 5-like... [more]
A0A210QA61_MIZYE3.420e-572.00ATPase family AAA domain-containing protein 5 n=2 ... [more]
A0A8D0BEM7_9SAUR6.410e-555.88ATPase_AAA_core domain-containing protein n=1 Tax=... [more]
F6ZIX7_MONDO8.760e-555.00AAA domain-containing protein n=3 Tax=Didelphinae ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..41
e-value: 6.5E-7
score: 31.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5443contigL-elsbetiae_contig5443:505..630 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5443.13689.1mRNA_L-elsbetiae_contig5443.13689.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5443 505..630 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5443.13689.1 ID=prot_L-elsbetiae_contig5443.13689.1|Name=mRNA_L-elsbetiae_contig5443.13689.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=42bp
DNKYQYDWIPYSDDDDEDSRLCNMAMLCGPPGVGKTSAVYG*
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