mRNA_L-elsbetiae_contig5443.13690.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5443.13690.1
Unique NamemRNA_L-elsbetiae_contig5443.13690.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig5443.13690.1 vs. uniprot
Match: A0A6H5KGC2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGC2_9PHAE)

HSP 1 Score: 150 bits (378), Expect = 5.190e-33
Identity = 90/131 (68.70%), Postives = 101/131 (77.10%), Query Frame = 2 
Query: 2348 TAMTDDQLLSAVDMFLTAEQRRRKEAIKGDQVRKRKAIDAANKLKSDRAQRDAWAYS----SACAVVAEAGDNRAAKRPRSMASIFEKRLHLRVPGAGRAASAVALARQREESGCGRWKLTPAPLPVCRRH 2728
            TAMTDDQLLSAVDMFLT +QR+RKEAIK DQ +KRK IDAANKL  DRAQRD+WA+S    S   + +  GD RAAKRPRSMASIF+K   +R  GA  AA+   LA+QREESG GRWK TPAPLPVCR H
Sbjct:  438 TAMTDDQLLSAVDMFLTTDQRKRKEAIKRDQAKKRKDIDAANKLLRDRAQRDSWAHSAGSFSPVDLTSSEGD-RAAKRPRSMASIFDK--PVRPTGAEGAAAXXXLAKQREESGYGRWKPTPAPLPVCRHH 565
[Close]
BLAST of mRNA_L-elsbetiae_contig5443.13690.1 vs. uniprot
Match: D7FH97_ECTSI (Similar to chromosome fragility associated gene 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH97_ECTSI)

HSP 1 Score: 91.7 bits (226), Expect = 8.170e-15
Identity = 49/59 (83.05%), Postives = 54/59 (91.53%), Query Frame = 2 
Query: 2348 TAMTDDQLLSAVDMFLTAEQRRRKEAIKGDQVRKRKAIDAANKLKSDRAQRDAWAYSSA 2524
            TAMTDDQLLSAVDMFLT EQR+RKEAIK DQ +KRK IDAANKL SDRAQRD+WA+S+A
Sbjct:  687 TAMTDDQLLSAVDMFLTTEQRKRKEAIKRDQAKKRKDIDAANKLLSDRAQRDSWAHSAA 745
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5443.13690.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KGC2_9PHAE5.190e-3368.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FH97_ECTSI8.170e-1583.05Similar to chromosome fragility associated gene 1 ... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5443contigL-elsbetiae_contig5443:3504..12280 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categorymitochondrion
Exons7
Model size3508
Cds size2775
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5443.13690.1prot_L-elsbetiae_contig5443.13690.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5443 4237..12280 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816570.2021031-UTR-L-elsbetiae_contig5443:3503..42361622816570.2021031-UTR-L-elsbetiae_contig5443:3503..4236Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5443 3504..4236 -
1691683654.6523054-UTR-L-elsbetiae_contig5443:3503..42361691683654.6523054-UTR-L-elsbetiae_contig5443:3503..4236Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5443 3504..4236 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816570.2150428-CDS-L-elsbetiae_contig5443:4236..44711622816570.2150428-CDS-L-elsbetiae_contig5443:4236..4471Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5443 4237..4471 -
1691683654.6624792-CDS-L-elsbetiae_contig5443:4236..44711691683654.6624792-CDS-L-elsbetiae_contig5443:4236..4471Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5443 4237..4471 -
1622816570.2252629-CDS-L-elsbetiae_contig5443:6500..66551622816570.2252629-CDS-L-elsbetiae_contig5443:6500..6655Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5443 6501..6655 -
1691683654.6725132-CDS-L-elsbetiae_contig5443:6500..66551691683654.6725132-CDS-L-elsbetiae_contig5443:6500..6655Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5443 6501..6655 -
1622816570.2400362-CDS-L-elsbetiae_contig5443:7341..73951622816570.2400362-CDS-L-elsbetiae_contig5443:7341..7395Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5443 7342..7395 -
1691683654.68283-CDS-L-elsbetiae_contig5443:7341..73951691683654.68283-CDS-L-elsbetiae_contig5443:7341..7395Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5443 7342..7395 -
1622816570.2524097-CDS-L-elsbetiae_contig5443:7511..77581622816570.2524097-CDS-L-elsbetiae_contig5443:7511..7758Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5443 7512..7758 -
1691683654.6933448-CDS-L-elsbetiae_contig5443:7511..77581691683654.6933448-CDS-L-elsbetiae_contig5443:7511..7758Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5443 7512..7758 -
1622816570.2637079-CDS-L-elsbetiae_contig5443:9817..100041622816570.2637079-CDS-L-elsbetiae_contig5443:9817..10004Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5443 9818..10004 -
1691683654.7078707-CDS-L-elsbetiae_contig5443:9817..100041691683654.7078707-CDS-L-elsbetiae_contig5443:9817..10004Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5443 9818..10004 -
1622816570.2740154-CDS-L-elsbetiae_contig5443:10049..118401622816570.2740154-CDS-L-elsbetiae_contig5443:10049..11840Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5443 10050..11840 -
1691683654.7238438-CDS-L-elsbetiae_contig5443:10049..118401691683654.7238438-CDS-L-elsbetiae_contig5443:10049..11840Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5443 10050..11840 -
1622816570.2839613-CDS-L-elsbetiae_contig5443:12174..122801622816570.2839613-CDS-L-elsbetiae_contig5443:12174..12280Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5443 12175..12280 -
1691683654.740602-CDS-L-elsbetiae_contig5443:12174..122801691683654.740602-CDS-L-elsbetiae_contig5443:12174..12280Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5443 12175..12280 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5443.13690.1

>prot_L-elsbetiae_contig5443.13690.1 ID=prot_L-elsbetiae_contig5443.13690.1|Name=mRNA_L-elsbetiae_contig5443.13690.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=925bp
PGTATLGLSRGKLCFVRGPASDSPGSVSASAPAAAAATGGGGNGSGSGNG
SGGGGGGGDSGDSGGAAPLRPNNGQDTASVTAAAAAAAANGKGKKSAGGP
RKKKGRLHLPTTTATKAKVEVKAIAGDAGGATTGTAAAVAAAAVVAVGVA
AAGKSSKPATARAPRAPKRSASAVGSPKSTKSTKEGYARGTAAAAAAREG
KPSVWQGCGFTGVNAAAAAAAAAAPATDGADADADADAVVIADADADADA
DADADANADADTDVVAVVASEGDQAVQGTALSTPSVEPSRAGGELSGGNG
NGAGGTVTNLSAAGCGPAGGGGGGGERDDDIAARSTDAFPAAGDGPAVRL
EPAVARAGEPLGAEPGGSSHGGGGAYETGPTASEATAPAAAAASEVPADE
AAAPASKAAASGTATATTPPPVAALLAPGASGETAAPTAPANGDAPSGDD
DGGGGGGGGGGGGGGGAAASDASSSPALGRSCATGAPGAAHGGAKVALGG
AGRVSERVAARAAAEQAKAAAAKEALRKRRKGAPPLAAAAAPARKSRPSS
SSATTTDKNAAAAGATSGKGASTAVRGPAKAEGMGGGVKTRVIHGTLSPS
LGAAGTAAAAVATKPAKIAKIASIFLPRSSGGGSARPAPAAPKLAPLFLP
KKASAGSTSNGGGGGGGGGSAGGDCSSQTKKQKTHTPLPSRIEVSTNTTV
SVHGDDDDDDDNDGDRVVDTTTGGRRGGSRRQGVAAAPAGGGRNNDTVDL
AGEEEEEEEGVVGGDGGGGGGWEAAAVGGEEEDGHDGRPAPVCSRHVSDG
RATAAQGGDQGRPGQEAEGDRRRQQAQERPRAEGRLGLLVCLRCRRRGRG
QQGRKAPPVHGLHLRKKVTSAGARGGPRGVGGGAGATARGERVRPLEADP
GAAARVPPPPAAPLRGRRRGWGCR*
back to top

mRNA from alignment at L-elsbetiae_contig5443:3504..12280-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5443.13690.1 ID=mRNA_L-elsbetiae_contig5443.13690.1|Name=mRNA_L-elsbetiae_contig5443.13690.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=8777bp|location=Sequence derived from alignment at L-elsbetiae_contig5443:3504..12280- (Laminarionema elsbetiae ELsaHSoW15)
CCTGGCACGGCTACTCTGGGGCTGTCGAGAGGCAAGCTGTGCTTCGTCAG
GGGCCCTGCGAGCGATTCCCCGGGGTCGGTGTCAGCTTCCGCGCCGGCGG
CGGCAGGTGAGAGATAAACATCAACATTTTTTTTTTTTTTCCNNNNNNNN
GGGGCCGGCGCAGGACAATCCCGGGGGGGCTTGCGGGGGTCGGGGGCGGG
GGCGGGCGGTGAGAGATAAACATCAGCGTTTTTTTTTTTTTTCCTTCACA
TTTATGTTCAGTGCTCGATGGGCTCCTTGCCACGATGACATCTTGCCGGA
GTACCGCTGAACCGGGGTCACACAGAAGGGTTACTTTTTCCCCGAGGCAC
GGGATCCCGTGAGATTCAATATCTTGCTTTTGGTCGTCGCCCTCGATATG
TACACGGCAGGGCCAGGGCGCACCGCAGCCGGAGTGTCAGCGGCGACCGG
CGGTGGCGGCAATGGCAGTGGCAGCGGCAATGGCAGCGGTGGCGGCGGCG
GCGGCGGCGACAGCGGCGACAGCGGCGGCGCAGCTCCCCTCCGGCCTAAC
AACGGGCAGGACACCGCCTCCGTTACCGCCGCAGCCGCCGCAGCAGCAGC
AAATGGCAAGGGCAAGAAGTCAGCGGGGGGGCCCAGGAAGAAGAAGGGCA
GGCTCCACCTGCCGACCACCACGGCGACCAAGGCTAAGGTCGAGGTTAAG
GCTATTGCCGGAGACGCCGGCGGCGCCACCACCGGAACGGCGGCGGCGGT
GGCGGCGGCGGCGGTAGTGGCGGTGGGGGTGGCGGCGGCGGGGAAGTCTT
CCAAGCCCGCGACGGCCAGAGCGCCCAGAGCGCCCAAGAGGTCGGCCTCG
GCGGTCGGATCTCCGAAATCTACGAAATCTACGAAAGAGGGGTACGCCAG
GGGCACCGCCGCCGCCGCGGCGGCGAGGGAAGGCAAGCCGAGCGTCTGGC
AAGGGTGCGGGTTCACCGGTGTTAACGCTGCCGCCGCCGCCGCCGCCGCC
GCGGCCCCTGCTACTGATGGTGCTGATGCCGATGCTGATGCTGATGCTGT
TGTTATTGCTGATGCTGATGCTGATGCTGATGCTGATGCTGATGCTGATG
CTAATGCTGACGCTGATACTGATGTTGTTGCTGTCGTTGCGTCGGAAGGA
GACCAAGCCGTGCAAGGAACGGCTCTCAGTACGCCCTCAGTAGAACCATC
GCGGGCGGGCGGAGAACTAAGCGGGGGGAACGGGAACGGGGCGGGCGGGA
CTGTCACCAACTTATCGGCGGCGGGTTGTGGACCTGCCGGAGGGGGAGGA
GGAGGGGGCGAGCGGGACGATGACATCGCTGCTCGCTCAACCGACGCGTT
TCCCGCAGCGGGCGATGGGCCAGCTGTCCGACTAGAACCAGCGGTAGCAA
GAGCCGGGGAGCCGCTGGGGGCGGAGCCGGGCGGGAGCAGCCACGGGGGG
GGCGGCGCCTATGAAACCGGCCCCACTGCGTCGGAGGCCACGGCACCGGC
GGCGGCGGCGGCATCGGAAGTGCCGGCGGACGAGGCGGCGGCACCGGCGA
GCAAGGCCGCCGCATCCGGAACGGCGACGGCGACAACGCCGCCGCCGGTG
GCGGCGCTTCTCGCGCCGGGCGCGTCCGGCGAGACGGCGGCACCCACGGC
CCCAGCCAACGGCGACGCTCCTTCCGGTGACGACGACGGCGGCGGCGGCG
GCGGCGGCGGCGGCGGCGGCGGCGGGGGGGGGGCTGCCGCCTCCGACGCT
TCTTCTTCTCCCGCGCTGGGTCGTTCCTGCGCTACCGGTGCCCCCGGCGC
CGCCCACGGCGGCGCCAAGGTAGCCCTCGGTGGAGCGGGCCGGGTGTCCG
AGCGCGTCGCCGCGAGAGCAGCAGCGGAGCAGGCCAAGGCGGCGGCGGCA
AAGGAGGCTCTCCGCAAGCGGCGCAAGGGAGCTCCGCCCCTCGCCGCCGC
CGCGGCACCGGCGAGAAAGAGCAGGCCGTCCAGCTCGTCGGCGACAACGA
CGGACAAGAATGCCGCCGCCGCCGGGGCTACCAGCGGCAAGGGAGCCAGC
ACGGCGGTCCGGGGCCCCGCGAAAGCAGAGGGCATGGGCGGGGGTGTCAA
GACCCGCGTGATCCACGGGACTCTCTCTCCGTCTCTGGGGGCGGCGGGGA
CGGCGGCGGCGGCGGTAGCGACCAAGCCCGCCAAGATCGCCAAGATCGCC
TCGATTTTTTTGCCGAGGTCTAGCGGGGGTGGTATCGGCAGCGACAGCGG
CAGCGGCAGCGGCAGTGGCAACAGAGGAAGTGCGCGCCCCGCGCCTGCTG
CCCCGAAGCTAGCGCCGCTGTTCTTGCCGAAGAAGGCCAGCGCGGGGAGC
ACAAGCAACGGTGGCGGAGGCGGAGGCGGCGGCGGCAGCGCCGGCGGCGA
TTGTAGCAGTCAGACCAAGAAGCAGAAAACGCATACGCCGCTCCCCTCAA
GGATCGAGGTGAGGTTTGGGGGCTCTGTGTGGGTTTTCCGCCCTGTGTGA
GATGGCGGGTACCTGGCGTGGAACAAGAGTGCATGTAACGGGGAGTTGTC
CGTGACTTTGCTGCATATGTGTGACCCCGGCTGGGTCGGCTAGCTACAAC
AGTGCTGCAGGCCGGTTTTAGGGGGCGCCAGTCGGAAACACCCTTTCGGC
TGCTGTGCGGTCCGGCGACGACACTGTATGCAGATCTAAGGCGCTGCGGC
CGTAGAGTTCTGCCCCTCCTGTCTAATGACGCCTGATTTTGTCAGGTTCC
TCCTCCTATTGCTCTCAAACCCGACGAAACAAACTTTCGCGGTTGTGCCG
CAAATAGCCAGCAAAAAAAGTGCGGCGCAACCCCCTGCCGGATCGCGGGT
GTATTTCCCCCGAGCCCGAGAACGCGTCGCCGACAGCACAAATCCGCTTG
AAACTTTGCACATTAACTTATAATACACTATTATGAGTTCGCACCCAAGT
TGGTGCGTCGAAATACACACAGCAGTAGTCGAGAGGAGTGTATTCCTCAG
AAAAGTCGCGTTTGCGCGACGGCGTAAGCTTAGCTTCCCCCCGAACGGTT
AAGGAAGGGTGCACTGGTATGTATGTCAAAGAGGACATTGTGAGGGTTTC
TCAGCAGTTCGAATTTTGCTGCAACATGCAGCATAGACCGAGAACTTGCC
AATCGGCGCGAAGCAAGTTTTGAATTTGCGCGGATATCGTATGCACTCTT
CGTGCGATACAAAAAAAAAAATCCGGCGCAAAATGCTGTAAAGTCAAATA
TTGCTTCGCGCCGATTGCGAGTTCTCGGCCTTTACTGCGTGTTGCAGCAA
AACTCTATGTGCTGAGCAATCCTCATAACACCTGCTTTAGTATACCAGTG
CAACCCTTCCCAAACCGTTGAGGAGGAAGCTACGCCTACCGTAGGTGACA
TAAGATAAGACACTCCCTGGACCGATTTTCAAAGCCCAAGTACTCCACAG
CAAGCAGGGCGTCAGTCCCGAAAAGGGCGGCGTTGGAAAGATCTCGTCGA
GAGCTGTCCGAAAATGTTGCGTTTATGGTTAGAATCGTACTCGTTGGGAG
TAACCAAGCTTTCAAAATCGGTCCAGGGGGTGTATTATCTTATGTCATAG
TAATACTAAGTATACGGTAAGCCGCCGCGCGGAGGCAACTTTTATGAGAA
AAATCCAGGAAAAATCGTCCCTGCTGACTGCCGCTGCGTGTATTTCGACG
CGCCACTTTCGGTGCTAGGTCCTCATGATACATGTAGTAGTATAAATACT
TGCCAAATTTCGCAACCTTTGGTTCTGTCTGCGACGCGTTCTCGTCATCA
TCGTTGAAAATCACGCGGAGGCATGTAGAGGTTGCCCCGCACACACGTCT
GCCAGCCATTTTTTTTTTTTCTAGAGCGAGCAGCACTGGCTAGTCCTAGT
GGAGGAAGGGGGGCCGGGGGGCAGACGACGAATAATAAGCCAATAATGGG
AGGAAACAAACAATAGGTACATACGTAGGATGCGACGGATTGTCAAAGGA
ATAAAGAACAAACCGACATCCCGCGGAATATACGTAAACACCCGTGAAAT
ATAAAAAATACGGTAATATGTATGTAGGTTGTCAGAGAGAACAAAAAAAT
GCACACATGGCCCCTGGTTTGAAAAAAAAAATGTTCTACCGACGCTATCC
CCCACAATTACCGTAGGTGACGCAAGATACCACACCCCCTGGACTGTCAA
CGTTTCGGGGGGACTGTCAGCGGGACTGTCAAGTATTTACCGTAGGTGAC
GCAAGATACCACACCCCCTGGACAGATTTTCAAACCTCGATTCACCCCCA
GCAAGACGAATGCCAGAGCCGAAAGGGGGTGCGTTGGAAAGATCTGAGCG
AGGGTTTTCCGAAAATGTGTCGTTTGGTGCTGGCACCTTCTTCGTTACGG
AGTAATAGGCCTCTAAAATTCGGCCCAGGGGGTGTGGTATCTTGTGTCAC
CTGCTGTAATTCAACGTGTTTTTGGCGGTTGCAGGTGATGGATGTGGAGG
ACGACGACGACGACGGCGCGAGCACCAATACGACAGTATCTGTTCACGGT
GACGACGACGATGACGACGACAACGACGGCGATCGTGTCGTAGACACCAC
CACCGGGGGGCGCCGTGGGGGCAGTCGAAGACAGGGGGTAGCAGCAGCAC
CCGCCGGAGGGGGGCGCAACAACGACACGGTTGACCTTGCGGGAGAGGAA
GAGGAAGAGGAGGAGGGCGTAGTGGGTGGGGACGGCGGCGGCGGCGGCGG
GTGGGAGGCAGCTGCCGTCGTTGCGGCGGCGGCGGCGGAGACGGCGGGCG
GGGGGAGGGCGGGGAGGAAGAAAACGGCCACGACAGACGACTTGCCAACG
GGACTGTCGGCAGTTTCAGCCGGCGGCGGGGGGAGGGCGGGGAGGAAGAA
GACGGCCATGACGGACGACCAGCTCCTGTCTGCAGTAGAGTGAGTCCTTA
TTGCTCCTACTGCCGTTGCGCAGGCAGCGCAACAACGACAACGAGCACCA
ACAAGGTTTCGCAACCATAGGGTGAAGGCTGACCCTAGCCTTAATCCTAA
CCTCCCCCGCCCGCGTGCTGCCGCTCTCACCCGCTGGTATGTATATTGTA
ACTATTTACTATTTGCATACATACGGGACTGTCAGCGTGTTTCTGACAGT
CCCTGCCTCCCCCGCCCGCTTGCTGCCTGCCGCTCTCGCTCGCTGGTACG
ATACACATGCCTACATATTTAGATACATACGGGACCGTCAGCATTTTTTC
TGACAGTCCCTGCCTCCCCCGCCCGCTTGCTGCCTGCCGCTCTCGCCCGC
TCGTTGGCATAACTATTTTGAAAGATAAGCAGATAATCAAAAATGGAACC
TAACCCGCATTGGCATAACTATTTACTAGGAGTATTTGCATACATCCGGG
ACTGTCACCGTGTTTCTGACAGTCCCTGCCTCCCCCCCCTTCCCCGCTCG
CGTGTGCTGCCGCTCTCGCCCGCTGGTATGTATCTGATGTATAACTATTT
ACTATTTGCATTTATTATTTTTATCATTTCATTTGCCAACCGACAATTAA
TTGCAGATGTATCCAACCAAAATTTCCTTCCCAACTGATGATGCTATACT
ATTTGCATACATACGGGACTGTCAGCATGTTTCTGACGGCCGAGCAACGG
CGGCGCAAGGAGGCGATCAAGGGAGACCAGGTCAGGAAGCGGAAGGCGAT
CGACGCCGCCAACAAGCTCAAGAGCGACCGCGCGCAGAGGGACGCCTGGG
CCTACTCGTCTGCCTGCGCTGTCGTCGCAGGTGTGTAGGCAGTAGGCAGG
CTCCGTAGGAGGGGGATAGTCTATGTACGCAGGTTTTTGTTGAGCGAAAC
ATATGGGATAAAAAGTATGGAATCGGGGAATGTCTGGAGGGTCGGTGGTT
AGGGTTAGGGTTAAAGTTAGGGTTACGGAGCCCCTACAACTCTATTTCAC
ATATAAACCAACATTCCCCGTTTTTTTTCTCGCGAAGGCAACCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCTCGGGGGGCCTCTCGCCTCTCCTGG
GGGGGAGGGGGGGCGGGGGGGGGGGGGGAGANNNNNNNNNNTATTTCAAA
AAAAAACCAACCTCCCCGGGTTTTTTTCCGGCGGAGCCCCCCCCCCCCCC
CCCCCTCCTGTCTGGCCCCGGTTGGGTCGCCTAGCTAGTCGTAGTGGAGG
AAGGGGACCAGTGGGGCAGACGACGAATAAGCCAATAATGAGAAAAACGA
AAAAAATGTGTGTATGTATAGCACGCCCCATGGACCGATTTTCAAAGCTC
GGTTACTCCGCAACAAGTGTATGATTAAATAGAAATTAGTGAATCAAAAA
TGGAAAAAAATATAGAAGTATAATTCTATTTACCAAGCGACACGTTTTCG
GACAGCTTTTGATGAGATCTTTCCAACGCCGTCACCGCAAGTGTAAACAG
AAATCAGTGAATCAAAAATGTATGTTTTGGTTTTTGTTTTACCTCCCAAT
ATTGGCATATTCGTCGTCTGCCCCACTGGCCCCCTTCCTCCACTACGACT
ACCTAGACGGCCCAACCGGGGTCACACAGGAGGGGGGGGGGGGGGGATCC
CCTCCTGCGGTGCCTGCCTTATGTGTTTTTATCGCGAGCAGGGTTCAGCA
TTCCCTAACCCTAACCCCTTGATCATCGCAGTTATGTGTGTACTTACCCA
GATCGCCTTCCCGAAGAATTCCTGTGATTCCTATCTACCGTAGGCGACAC
AAGATATCACACCCCTCGGACAGATTTTCAAAGCTCGGTTCCTCCCCAGC
AGGAAGAGTGTCGTGCCGAAAGAGAGTGTCATTGGAAAGATCTGATCGAA
GGCTGTCCAAAAACGTGTCGTTTGGTGCTGGCACCCTCTTCATTACGGAG
TAATGGAGCTCTAAAGTTCGGTCCAGGGGGTGTGGTATCTTGTGTCACCT
ACGGTATGTATATAGGAAATAATAGACAGGGGTTCCGTAACCCTAAGCCC
AAACCCTCCCCTCACTAGCCATTTCCATGCTTCATCCCATATGATTTATT
CCAGTAAAACCCCCCGAAGGCTGCTGTTCCACATACAAGGGCAGGCACAG
CTATCTATCTAAATAGTGCTGCAAGAACACTTCTGTGTGACCACGGTCTT
CAGTACCCTTGCCAAGATGCCCTCGTGGCAAGGAGCCCATCGAGCACACT
GGAAATAAACATATATGAGAAAAGAGAACGCTGGATATTTTGTTTGGTAG
TGTTGGCGGTTTGTGCAATCTACGCAGCGTGTTCGAGTATGTACGAATAG
CATCATCAGTTTGGAAGAAATTTTGGTTGGATAAATACTACTGTACATCT
GCAATTGTCGGATGGCAAATAAAATAACAATATAACAAAAATGGGCAGGT
TTGCTGAAGCTGTGCAGTGGTGGAACAAACAGATATTTATTGAATGGAAC
CGTCGAATTTGTTTAGATTGGTTCCGAAGGCGTTCACCGATGTTTTGGGG
TACTCGGGGTGAGTTGTATTATGCGGCACGGGGCCCCTAGTATTTGAGTA
GAAGGTGGCTCACTTTGTGGAAGCCAACCTGTCTGTTCACCTAGAGAGTT
TTAGCGCTCCAGGAAGCGTAGCGCAGAGGAAGGGAGCAAGGTGGACACGT
AAAGAGCTTCAAGGAGTTGGTCAGCTTCAGAAGCGGCCAACATGTCGAGT
AATGTGAGCAAGAAAAAAATAAAAAATAATAATTTTGTAACCCTGCCCGT
TGCCCTTAACTCCTTCTTCTTAACAGGGTCGGGGCTGTCGGCCGACCCCT
CATCGGGAGAGGCAGGGGACAACAGGGCCGCAAAGCGCCCCCGGTCCATG
GCCTCCATCTTCGAAAAAAGGTTACATCTGCGGGTGCCCGGGGCGGGCCG
CGCGGCGTCGGCGGTGGCGCTGGCGCGACAGCGAGAGGAGAGCGGGTGCG
GCCGCTGGAAGCTGACCCCGGCGCCGCTGCCCGTGTGCCGCCGCCACCAG
CAGCACCACTCCGCGGGCGGCGGCGGGGGTGGGGGTGTCGGTGAGGACCC
CGCGTCGCCCCCTCCCCTTGGTGCCGGGATGTCTGCGGCCGCCGCGCTCG
AGTTATCGCCGTCGCCGCCGCCGCGGTCTCCGACGCCGTCGCCGTTATCA
TCTCCGGAAGGACAGGCGGCCGTTGTCGGGGACCCTGCCGGCGCTTCTTC
TTCTGCGACATGTGGTAGCGGTGGCCGTGGTGGTGGTGGTGGTGGTGATG
GTGGTGGGGATTGTCCTGCTTGCGCCGTGGTTGAGGCGGAGCTGCGGTCG
CTTCTGCTGTTGCCCGGTGTCGGCGTTGGTGGCCATGGTCGTGGCCGCGG
CGGCGGAGACGACGATTGTGAGGGCGACGCCAAGAGAATGCCCGACGTCG
CCGCGCCGCCGCCGCCGCCGCTAGCACTACCGCTGCCGCCGCTAGCACCG
CTGCCGATGATGCCGTCGGCAGCAGCGGCTGAGGGGGGCGCCACTCCTTC
CGAGAGCGAAGCGGCGGACTGGAGCCGCGCGGTGACCGCGGGGGCGCCGG
CATCTGCGGCGGGACCAGCAGCACCAGCACGGGGACCACGGGGACCCCAA
GGGCGTGCGGTCATGGCAGCGGCGGCGGCTGCGGCGGCGGCGACGGCGGC
AAAATCATCCGCCGCAAGGAAGTCGTCCAGGAGTGCCGGCAAACCACTCC
CTTCTCCGGCGGCCCGGCTTTTCGCCGCCGCCCCCTTGGTTGGTGGATCT
GGGGGCTCCGCCGCCGGGAAACAACGG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig5443:3504..12280-

>mRNA_L-elsbetiae_contig5443.13690.1 ID=mRNA_L-elsbetiae_contig5443.13690.1|Name=mRNA_L-elsbetiae_contig5443.13690.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=5550bp|location=Sequence derived from alignment at L-elsbetiae_contig5443:3504..12280- (Laminarionema elsbetiae ELsaHSoW15)
CCTGGCACGGCTACTCTGGGGCTGTCGAGAGGCAAGCTGTGCTTCGTCAG
GGGCCCTGCGAGCGATTCCCCGGGGTCGGTGTCAGCTTCCGCGCCGGCGG
CGGCAGCCTGGCACGGCTACTCTGGGGCTGTCGAGAGGCAAGCTGTGCTT
CGTCAGGGGCCCTGCGAGCGATTCCCCGGGGTCGGTGTCAGCTTCCGCGC
CGGCGGCGGCAGCGGCGACCGGCGGTGGCGGCAATGGCAGTGGCAGCGGC
AATGGCAGCGGTGGCGGCGGCGGCGGCGGCGACAGCGGCGACAGCGGCGG
CGCAGCTCCCCTCCGGCCTAACAACGGGCAGGACACCGCCTCCGTTACCG
CCGCAGCCGCCGCAGCAGCAGCAAATGGCAAGGGCAAGAAGTCAGCGGGG
GGGCCCAGGAAGAAGAAGGGCAGGCTCCACCTGCCGACCACCACGGCGAC
CAAGGCTAAGGTCGAGGTTAAGGCTATTGCCGGAGACGCCGGCGGCGCCA
CCACCGGAACGGCGGCGGCGGTGGCGGCGGCGGCGGTAGTGGCGGTGGGG
GTGGCGGCGGCGGGGAAGTCTTCCAAGCCCGCGACGGCCAGAGCGCCCAG
AGCGCCCAAGAGGTCGGCCTCGGCGGTCGGATCTCCGAAATCTACGAAAT
CTACGAAAGAGGGGTACGCCAGGGGCACCGCCGCCGCCGCGGCGGCGAGG
GAAGGCAAGCCGAGCGTCTGGCAAGGGTGCGGGTTCACCGGTGTTAACGC
TGCCGCCGCCGCCGCCGCCGCCGCGGCCCCTGCTACTGATGGTGCTGATG
CCGATGCTGATGCTGATGCTGTTGTTATTGCTGATGCTGATGCTGATGCT
GATGCTGATGCTGATGCTGATGCTAATGCTGACGCTGATACTGATGTTGT
TGCTGTCGTTGCGTCGGAAGGAGACCAAGCCGTGCAAGGAACGGCTCTCA
GTACGCCCTCAGTAGAACCATCGCGGGCGGGCGGAGAACTAAGCGGGGGG
AACGGGAACGGGGCGGGCGGGACTGTCACCAACTTATCGGCGGCGGGTTG
TGGACCTGCCGGAGGGGGAGGAGGAGGGGGCGAGCGGGACGATGACATCG
CTGCTCGCTCAACCGACGCGTTTCCCGCAGCGGGCGATGGGCCAGCTGTC
CGACTAGAACCAGCGGTAGCAAGAGCCGGGGAGCCGCTGGGGGCGGAGCC
GGGCGGGAGCAGCCACGGGGGGGGCGGCGCCTATGAAACCGGCCCCACTG
CGTCGGAGGCCACGGCACCGGCGGCGGCGGCGGCATCGGAAGTGCCGGCG
GACGAGGCGGCGGCACCGGCGAGCAAGGCCGCCGCATCCGGAACGGCGAC
GGCGACAACGCCGCCGCCGGTGGCGGCGCTTCTCGCGCCGGGCGCGTCCG
GCGAGACGGCGGCACCCACGGCCCCAGCCAACGGCGACGCTCCTTCCGGT
GACGACGACGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGGGG
GGGGGCTGCCGCCTCCGACGCTTCTTCTTCTCCCGCGCTGGGTCGTTCCT
GCGCTACCGGTGCCCCCGGCGCCGCCCACGGCGGCGCCAAGGTAGCCCTC
GGTGGAGCGGGCCGGGTGTCCGAGCGCGTCGCCGCGAGAGCAGCAGCGGA
GCAGGCCAAGGCGGCGGCGGCAAAGGAGGCTCTCCGCAAGCGGCGCAAGG
GAGCTCCGCCCCTCGCCGCCGCCGCGGCACCGGCGAGAAAGAGCAGGCCG
TCCAGCTCGTCGGCGACAACGACGGACAAGAATGCCGCCGCCGCCGGGGC
TACCAGCGGCAAGGGAGCCAGCACGGCGGTCCGGGGCCCCGCGAAAGCAG
AGGGCATGGGCGGGGGTGTCAAGACCCGCGTGATCCACGGGACTCTCTCT
CCGTCTCTGGGGGCGGCGGGGACGGCGGCGGCGGCGGTAGCGACCAAGCC
CGCCAAGATCGCCAAGATCGCCTCGATTTTTTTGCCGAGGTCTAGCGGGG
GTGCGGCGACCGGCGGTGGCGGCAATGGCAGTGGCAGCGGCAATGGCAGC
GGTGGCGGCGGCGGCGGCGGCGACAGCGGCGACAGCGGCGGCGCAGCTCC
CCTCCGGCCTAACAACGGGCAGGACACCGCCTCCGTTACCGCCGCAGCCG
CCGCAGCAGCAGCAAATGGCAAGGGCAAGAAGTCAGCGGGGGGGCCCAGG
AAGAAGAAGGGCAGGCTCCACCTGCCGACCACCACGGCGACCAAGGCTAA
GGTCGAGGTTAAGGCTATTGCCGGAGACGCCGGCGGCGCCACCACCGGAA
CGGCGGCGGCGGTGGCGGCGGCGGCGGTAGTGGCGGTGGGGGTGGCGGCG
GCGGGGAAGTCTTCCAAGCCCGCGACGGCCAGAGCGCCCAGAGCGCCCAA
GAGGTCGGCCTCGGCGGTCGGATCTCCGAAATCTACGAAATCTACGAAAG
AGGGGTACGCCAGGGGCACCGCCGCCGCCGCGGCGGCGAGGGAAGGCAAG
CCGAGCGTCTGGCAAGGGTGCGGGTTCACCGGTGTTAACGCTGCCGCCGC
CGCCGCCGCCGCCGCGGCCCCTGCTACTGATGGTGCTGATGCCGATGCTG
ATGCTGATGCTGTTGTTATTGCTGATGCTGATGCTGATGCTGATGCTGAT
GCTGATGCTGATGCTAATGCTGACGCTGATACTGATGTTGTTGCTGTCGT
TGCGTCGGAAGGAGACCAAGCCGTGCAAGGAACGGCTCTCAGTACGCCCT
CAGTAGAACCATCGCGGGCGGGCGGAGAACTAAGCGGGGGGAACGGGAAC
GGGGCGGGCGGGACTGTCACCAACTTATCGGCGGCGGGTTGTGGACCTGC
CGGAGGGGGAGGAGGAGGGGGCGAGCGGGACGATGACATCGCTGCTCGCT
CAACCGACGCGTTTCCCGCAGCGGGCGATGGGCCAGCTGTCCGACTAGAA
CCAGCGGTAGCAAGAGCCGGGGAGCCGCTGGGGGCGGAGCCGGGCGGGAG
CAGCCACGGGGGGGGCGGCGCCTATGAAACCGGCCCCACTGCGTCGGAGG
CCACGGCACCGGCGGCGGCGGCGGCATCGGAAGTGCCGGCGGACGAGGCG
GCGGCACCGGCGAGCAAGGCCGCCGCATCCGGAACGGCGACGGCGACAAC
GCCGCCGCCGGTGGCGGCGCTTCTCGCGCCGGGCGCGTCCGGCGAGACGG
CGGCACCCACGGCCCCAGCCAACGGCGACGCTCCTTCCGGTGACGACGAC
GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGGGGGGGGGCTGC
CGCCTCCGACGCTTCTTCTTCTCCCGCGCTGGGTCGTTCCTGCGCTACCG
GTGCCCCCGGCGCCGCCCACGGCGGCGCCAAGGTAGCCCTCGGTGGAGCG
GGCCGGGTGTCCGAGCGCGTCGCCGCGAGAGCAGCAGCGGAGCAGGCCAA
GGCGGCGGCGGCAAAGGAGGCTCTCCGCAAGCGGCGCAAGGGAGCTCCGC
CCCTCGCCGCCGCCGCGGCACCGGCGAGAAAGAGCAGGCCGTCCAGCTCG
TCGGCGACAACGACGGACAAGAATGCCGCCGCCGCCGGGGCTACCAGCGG
CAAGGGAGCCAGCACGGCGGTCCGGGGCCCCGCGAAAGCAGAGGGCATGG
GCGGGGGTGTCAAGACCCGCGTGATCCACGGGACTCTCTCTCCGTCTCTG
GGGGCGGCGGGGACGGCGGCGGCGGCGGTAGCGACCAAGCCCGCCAAGAT
CGCCAAGATCGCCTCGATTTTTTTGCCGAGGTCTAGCGGGGGTGGAAGTG
CGCGCCCCGCGCCTGCTGCCCCGAAGCTAGCGCCGCTGTTCTTGCCGAAG
AAGGCCAGCGCGGGGAGCACAAGCAACGGTGGCGGAGGCGGAGGCGGCGG
CGGCAGCGCCGGCGGCGATTGTAGCAGTCAGACCAAGAAGCAGAAAACGC
ATACGCCGCTCCCCTCAAGGATCGAGGTGAGGAAGTGCGCGCCCCGCGCC
TGCTGCCCCGAAGCTAGCGCCGCTGTTCTTGCCGAAGAAGGCCAGCGCGG
GGAGCACAAGCAACGGTGGCGGAGGCGGAGGCGGCGGCGGCAGCGCCGGC
GGCGATTGTAGCAGTCAGACCAAGAAGCAGAAAACGCATACGCCGCTCCC
CTCAAGGATCGAGGTGAGCACCAATACGACAGTATCTGTTCACGGTGACG
ACGACGATGACGACGACAACGACGGCGATCGTGTCGTAGACACCACCACC
GGGGGGCGCCGTGGGGGCAGTCGAAGACAGGGGGTAGCAGCAGCACCCGC
CGGAGGGGGGCGCAACAACGACACGGTTGACCTTGCGGGAGAGGAAGAGG
AAGAGGAGGAGGGCGTAGTGGGTGGGGACGGCGGCGGCGGCGGCGGGTGG
GAGGCAGCTGCCGTCCACCAATACGACAGTATCTGTTCACGGTGACGACG
ACGATGACGACGACAACGACGGCGATCGTGTCGTAGACACCACCACCGGG
GGGCGCCGTGGGGGCAGTCGAAGACAGGGGGTAGCAGCAGCACCCGCCGG
AGGGGGGCGCAACAACGACACGGTTGACCTTGCGGGAGAGGAAGAGGAAG
AGGAGGAGGGCGTAGTGGGTGGGGACGGCGGCGGCGGCGGCGGGTGGGAG
GCAGCTGCCGTCGGCGGGGAGGAAGAAGACGGCCATGACGGACGACCAGC
TCCTGTCTGCAGTAGAGGCGGGGAGGAAGAAGACGGCCATGACGGACGAC
CAGCTCCTGTCTGCAGTAGACATGTTTCTGACGGCCGAGCAACGGCGGCG
CAAGGAGGCGATCAAGGGAGACCAGGTCAGGAAGCGGAAGGCGATCGACG
CCGCCAACAAGCTCAAGAGCGACCGCGCGCAGAGGGACGCCTGGGCCTAC
TCGTCTGCCTGCGCTGTCGTCGCAGCATGTTTCTGACGGCCGAGCAACGG
CGGCGCAAGGAGGCGATCAAGGGAGACCAGGTCAGGAAGCGGAAGGCGAT
CGACGCCGCCAACAAGCTCAAGAGCGACCGCGCGCAGAGGGACGCCTGGG
CCTACTCGTCTGCCTGCGCTGTCGTCGCAGAGGCAGGGGACAACAGGGCC
GCAAAGCGCCCCCGGTCCATGGCCTCCATCTTCGAAAAAAGGTTACATCT
GCGGGTGCCCGGGGCGGGCCGCGCGGCGTCGGCGGTGGCGCTGGCGCGAC
AGCGAGAGGAGAGCGGGTGCGGCCGCTGGAAGCTGACCCCGGCGCCGCTG
CCCGTGTGCCGCCGCCACCAGCAGCACCACTCCGCGGGCGGCGGCGGGGG
TGGGGGTGTCGGTGAAGGCAGGGGACAACAGGGCCGCAAAGCGCCCCCGG
TCCATGGCCTCCATCTTCGAAAAAAGGTTACATCTGCGGGTGCCCGGGGC
GGGCCGCGCGGCGTCGGCGGTGGCGCTGGCGCGACAGCGAGAGGAGAGCG
GGTGCGGCCGCTGGAAGCTGACCCCGGCGCCGCTGCCCGTGTGCCGCCGC
CACCAGCAGCACCACTCCGCGGGCGGCGGCGGGGGTGGGGGTGTCGGTGA
back to top