Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | other localisation |
Exons | 1 |
Model size | 560 |
Cds size | 330 |
Stop | 0 |
Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816569.3184233-UTR-L-elsbetiae_contig5439:8294..8523 | 1622816569.3184233-UTR-L-elsbetiae_contig5439:8294..8523 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig5439 8295..8523 + |
1691683653.9706473-UTR-L-elsbetiae_contig5439:8294..8523 | 1691683653.9706473-UTR-L-elsbetiae_contig5439:8294..8523 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig5439 8295..8523 + |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816569.3305435-CDS-L-elsbetiae_contig5439:8523..8853 | 1622816569.3305435-CDS-L-elsbetiae_contig5439:8523..8853 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5439 8524..8853 + |
1691683653.9826055-CDS-L-elsbetiae_contig5439:8523..8853 | 1691683653.9826055-CDS-L-elsbetiae_contig5439:8523..8853 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5439 8524..8853 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5439.13681.1 >prot_L-elsbetiae_contig5439.13681.1 ID=prot_L-elsbetiae_contig5439.13681.1|Name=mRNA_L-elsbetiae_contig5439.13681.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=110bp
MGGTPDGHTTRCSTWHAASSPGGAHNKSGHWRYSRRSSSSPCLPLSWLPF WLLSASSNNTNISGRNISGRSISISSSSSSSSSNGLGHGGHGMTTRVRQP TEQREGLETA back to topmRNA from alignment at L-elsbetiae_contig5439:8295..8853+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig5439.13681.1 ID=mRNA_L-elsbetiae_contig5439.13681.1|Name=mRNA_L-elsbetiae_contig5439.13681.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=559bp|location=Sequence derived from alignment at L-elsbetiae_contig5439:8295..8853+ (Laminarionema elsbetiae ELsaHSoW15) GATTGACGAAGTTCAATCCTCTCTCGGCTCTCGCCCTGTCGCAACCGGTT
GTTTTTTCGCATCGGAAGAAACCCGATATACATTCCTGCGACGCACAACA
GCTGCGTTTACGTTTGACGCAGCAGATCATCGATGAGACCTCGTCTGCGT
GACAGCGGATGGCATCGTCGCGGCCGCGGGACCTGACCCGCCCCCTTCCT
CCGTCTCTCTTTTGTCGCTTGGTTTTCTGATGGGAGGGACCCCAGACGGC
CACACAACACGTTGCAGCACTTGGCACGCTGCCTCTTCCCCAGGCGGCGC
ACACAATAAAAGCGGGCACTGGCGCTACAGCCGCCGCAGCAGCAGCAGTC
CATGTCTTCCCCTGTCATGGCTGCCATTTTGGCTGCTCAGCGCCAGCAGC
AACAACACCAACATCAGCGGCCGCAACATCAGCGGCCGCAGCATCAGCAT
CAGCAGCAGCAGCAGCAGCAGCAGCTCCAACGGGCTGGGGCACGGCGGCC
ACGGAATGACCACCCGGGTCCGACAGCCAACGGAACAGCGAGAAGGGCTG
GAGACGGCG back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig5439:8295..8853+ >mRNA_L-elsbetiae_contig5439.13681.1 ID=mRNA_L-elsbetiae_contig5439.13681.1|Name=mRNA_L-elsbetiae_contig5439.13681.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=660bp|location=Sequence derived from alignment at L-elsbetiae_contig5439:8295..8853+ (Laminarionema elsbetiae ELsaHSoW15) ATGGGAGGGACCCCAGACGGCCACACAACACGTTGCAGCACTTGGCACGC TGCCTCTTCCCCAGGCGGCGCACACAATAAAAGCGGGCACTGGCGCTACA GCCGCCGCAGCAGCAGCAGTCCATGTCTTCCCCTGTCATGGCTGCCATTT TGGCTGCTCAGCGCCAGCAGCAACAACACCAACATCAGCGGCCGCAACAT CAGCGGCCGCAGCATCAGCATCAGCAGCAGCAGCAGCAGCAGCAGCTCCA ACGGGCTGGGGCACGGCGGCCACGGAATGACCACCCGGGTCCGACAGCCA ACGGAACAGCGAGAAGGGCTGGAGACGGCGATGGGAGGGACCCCAGACGG CCACACAACACGTTGCAGCACTTGGCACGCTGCCTCTTCCCCAGGCGGCG CACACAATAAAAGCGGGCACTGGCGCTACAGCCGCCGCAGCAGCAGCAGT CCATGTCTTCCCCTGTCATGGCTGCCATTTTGGCTGCTCAGCGCCAGCAG CAACAACACCAACATCAGCGGCCGCAACATCAGCGGCCGCAGCATCAGCA TCAGCAGCAGCAGCAGCAGCAGCAGCTCCAACGGGCTGGGGCACGGCGGC CACGGAATGACCACCCGGGTCCGACAGCCAACGGAACAGCGAGAAGGGCT GGAGACGGCG back to top
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