prot_L-elsbetiae_contig5437.13677.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5437.13677.1
Unique Nameprot_L-elsbetiae_contig5437.13677.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length202
Homology
BLAST of mRNA_L-elsbetiae_contig5437.13677.1 vs. uniprot
Match: D7FUB0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUB0_ECTSI)

HSP 1 Score: 371 bits (952), Expect = 8.530e-129
Identity = 190/201 (94.53%), Postives = 197/201 (98.01%), Query Frame = 0
Query:    1 MGQTKVIAIVKGPREVTRRQDRKHESAIVNCEYNVAPFSGSERKKRRPTERKSMEIALAVKEVFEGAIMLHLYPRTQIDIYLHVIQSDGGVLPVSVNAASLALVDAGVAMSDLVVACSAGYLDGMPVMDLNYVEQALGGPYLPVAVLPEKDKLLLAKMESRLPLEIFEEVLRAATDACQQVHEVLRAAVREHAGGLLSSQV 201
            MGQTK+IAIVKGPREVTRRQDRK+++ IVNCEYNVAPFSGSERKKRRPTERK MEIALAVKEVFEGAIMLHLYPRTQIDIYLHVIQSDGGVLPV +NAASLALVDAGVAMSDLVVACSAGYLDGMPVMDLNYVEQALGGPYLPVAVLPEKDKLLLAKMESRLPLEIFEEVLRAATDACQQVHEVLRAAV+EHAG LLSSQ+
Sbjct:   44 MGQTKIIAIVKGPREVTRRQDRKYDTGIVNCEYNVAPFSGSERKKRRPTERKGMEIALAVKEVFEGAIMLHLYPRTQIDIYLHVIQSDGGVLPVGINAASLALVDAGVAMSDLVVACSAGYLDGMPVMDLNYVEQALGGPYLPVAVLPEKDKLLLAKMESRLPLEIFEEVLRAATDACQQVHEVLRAAVKEHAGALLSSQI 244          
BLAST of mRNA_L-elsbetiae_contig5437.13677.1 vs. uniprot
Match: A0A835YHF5_9STRA (Ribosomal protein S5 domain 2-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHF5_9STRA)

HSP 1 Score: 273 bits (698), Expect = 4.030e-90
Identity = 129/201 (64.18%), Postives = 173/201 (86.07%), Query Frame = 0
Query:    1 MGQTKVIAIVKGPREVTRRQDRKHESAIVNCEYNVAPFSGSERKKRRPTERKSMEIALAVKEVFEGAIMLHLYPRTQIDIYLHVIQSDGGVLPVSVNAASLALVDAGVAMSDLVVACSAGYLDGMPVMDLNYVEQALGGPYLPVAVLPEKDKLLLAKMESRLPLEIFEEVLRAATDACQQVHEVLRAAVREHAGGLLSSQV 201
            MGQTKVIAIVKGP EV+RR D   + AIVNCE+N+APF+GS+R+KRRPT+RK++E+A+++K VFEGA+ML LYPRTQID+Y+H+IQ+DGG LP S+NAASLAL DAG++M D+VV+CSAG++DG  VMDLN++EQ+ GG Y+P+A+LP   ++LLAKME+RLPL+IF+EVL  A +AC+QVH ++R  VREH   LL++Q+
Sbjct:   43 MGQTKVIAIVKGPHEVSRRSDMLIDKAIVNCEFNLAPFAGSDRRKRRPTDRKTVEMAMSIKAVFEGAVMLELYPRTQIDLYIHLIQTDGGQLPASINAASLALTDAGISMRDMVVSCSAGHVDGQAVMDLNHMEQSHGGAYVPLAILPRGSEILLAKMEARLPLDIFQEVLATALEACRQVHAIMRGEVREHHAALLAAQL 243          
BLAST of mRNA_L-elsbetiae_contig5437.13677.1 vs. uniprot
Match: A0A7S2V0R5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0R5_9STRA)

HSP 1 Score: 238 bits (607), Expect = 2.420e-76
Identity = 113/200 (56.50%), Postives = 157/200 (78.50%), Query Frame = 0
Query:    2 GQTKVIAIVKGPREVTRRQDRKHESAIVNCEYNVAPFSGSERKKRRPTERKSMEIALAVKEVFEGAIMLHLYPRTQIDIYLHVIQSDGGVLPVSVNAASLALVDAGVAMSDLVVACSAGYLDGMPVMDLNYVEQALGGPYLPVAVLPEKDKLLLAKMESRLPLEIFEEVLRAATDACQQVHEVLRAAVREHAGGLLSSQV 201
            GQTKV+  V+GPRE  RR +  H   I+ CE++ APFSG++RKKRR  +R+S EIA  V++ FEGA+M  LYPRTQIDI+LH++Q+DGG L   +NAASLALVDAGV M D+VVAC+AG+++  P+MDLNYVE++ GGP LP+AV+P++++++LA+M+++LPL++FE VL  A  AC QVH VL   +REHA  +LS ++
Sbjct:   41 GQTKVMCFVRGPREPDRRAEALHNHCIIRCEFHAAPFSGTDRKKRRQGDRRSQEIAQGVRQTFEGAVMRELYPRTQIDIHLHLLQADGGTLCACLNAASLALVDAGVGMKDMVVACTAGFIEATPIMDLNYVEESSGGPCLPLAVMPKRNEVVLAQMDAKLPLDVFEAVLETARQACDQVHTVLSNELREHASKMLSCRL 240          
BLAST of mRNA_L-elsbetiae_contig5437.13677.1 vs. uniprot
Match: A0A6V1TQR2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TQR2_HETAK)

HSP 1 Score: 228 bits (582), Expect = 1.760e-72
Identity = 111/200 (55.50%), Postives = 155/200 (77.50%), Query Frame = 0
Query:    2 GQTKVIAIVKGPREVTRRQDRKHESAIVNCEYNVAPFSGSERKKRRPTERKSMEIALAVKEVFEGAIMLHLYPRTQIDIYLHVIQSDGGVLPVSVNAASLALVDAGVAMSDLVVACSAGYLDGMPVMDLNYVEQALGGPYLPVAVLPEKDKLLLAKMESRLPLEIFEEVLRAATDACQQVHEVLRAAVREHAGGLLSSQV 201
            GQTK++ +++GP E  RR D   E  ++  +Y  A F+G+ERK+RR T+R+S E+  AV+E   GA+   LYPR+QID+YLHV+Q+DGG LP ++NAASLALVDAGVA  D+ VAC+AG + G  V+DLNY+EQ  GG YLPVA+LP+++K++LA M+S+LPLE+FEEVL+ A +ACQ+V+ VL+  VREHA  +LSS++
Sbjct:   47 GQTKILCVLRGPHEPDRRSDASDEGCLIKVQYAQAAFAGTERKQRRVTDRRSAEVCRAVQETLAGAVCRELYPRSQIDVYLHVLQTDGGELPCAINAASLALVDAGVAARDMAVACAAGRVAGETVVDLNYMEQNSGGVYLPVAILPKRNKIVLAMMDSKLPLEVFEEVLQVAMEACQEVYSVLQNEVREHASKVLSSRL 246          
BLAST of mRNA_L-elsbetiae_contig5437.13677.1 vs. uniprot
Match: A0A7S1G3R3_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G3R3_9STRA)

HSP 1 Score: 211 bits (536), Expect = 1.650e-65
Identity = 101/191 (52.88%), Postives = 142/191 (74.35%), Query Frame = 0
Query:    2 GQTKVIAIVKGPREVTRRQDRKHESAIVNCEYNVAPFSGSERKKRRPTERKSMEIALAVKEVFEGAIMLHLYPRTQIDIYLHVIQSDGGVLPVSVNAASLALVDAGVAMSDLVVACSAGYLDGMPVMDLNYVEQALGGPYLPVAVLPEKDKLLLAKMESRLPLEIFEEVLRAATDACQQVHEVLRAAVREH 192
            G TK +A+V GP+++TRR D  H+ A VNCE++ APF+GSERKK R ++R++ E +L +K+ FEG I  HLYPR+QIDI++ V+Q+DGG    ++N A+LAL+DAG+AM D VVAC+AG+LD   ++DLN VE   GGP + VA++P+  KL   +MESRLP++ FE VL  A   C+ + +VL+AAVREH
Sbjct:   44 GNTKAVAVVYGPKQITRRADALHDRASVNCEFSTAPFAGSERKKVRASDRRAAEASLMLKQTFEGVIQRHLYPRSQIDIFVQVLQADGGERAAAINVATLALIDAGIAMDDFVVACTAGFLDDTALLDLNSVETGPGGPRVEVAMVPQTGKLTAVQMESRLPVDHFEAVLELALSGCRHIFDVLQAAVREH 234          
BLAST of mRNA_L-elsbetiae_contig5437.13677.1 vs. uniprot
Match: D2VEP3_NAEGR (Predicted protein n=2 Tax=Naegleria TaxID=5761 RepID=D2VEP3_NAEGR)

HSP 1 Score: 203 bits (517), Expect = 1.280e-62
Identity = 93/199 (46.73%), Postives = 146/199 (73.37%), Query Frame = 0
Query:    2 GQTKVIAIVKGPREVTRRQDRKHESAIVNCEYNVAPFSGSERKKRRPTERKSMEIALAVKEVFEGAIMLHLYPRTQIDIYLHVIQSDGGVLPVSVNAASLALVDAGVAMSDLVVACSAGYLDGMPVMDLNYVEQALGGPYLPVAVLPEKDKLLLAKMESRLPLEIFEEVLRAATDACQQVHEVLRAAVREHAGGLLSSQ 200
            G T+V+A V GPREV  +   K++ AI+NCEY++A FS  ERK++   +R+S EI++ +++ FE  I+ HLYPRTQIDI++ V+Q+DGG     +NAA+LAL+DAG+ M D VV+C+AG++ G P+ DLNY+E   GGP +P+A+LP+ DK+ L +M+S+L L+ FE+VL  A + C+Q+H+V+   +++H   L++ +
Sbjct:   45 GNTRVLAAVYGPREVKNKSQMKNDRAIINCEYSMATFSTGERKRQFKKDRRSTEISVVIRQTFESVILTHLYPRTQIDIFMQVLQADGGTRCACINAATLALLDAGIPMKDFVVSCAAGFIQGSPLTDLNYIEDCAGGPDVPIALLPKHDKVTLLQMDSKLSLDQFEKVLEHAIEGCKQIHKVIDEQLKKHTYALVNKR 243          
BLAST of mRNA_L-elsbetiae_contig5437.13677.1 vs. uniprot
Match: A0A1Y1I745_KLENI (3'-5'-exoribonuclease family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I745_KLENI)

HSP 1 Score: 202 bits (515), Expect = 2.270e-62
Identity = 99/192 (51.56%), Postives = 141/192 (73.44%), Query Frame = 0
Query:    1 MGQTKVIAIVKGPREVTRRQDRKHESAIVNCEYNVAPFSGSERKKRRPTERKSMEIALAVKEVFEGAIMLHLYPRTQIDIYLHVIQSDGGVLPVSVNAASLALVDAGVAMSDLVVACSAGYLDGMPVMDLNYVEQALGGPYLPVAVLPEKDKLLLAKMESRLPLEIFEEVLRAATDACQQVHEVLRAAVREH 192
            MG TKV+A V GP EV++R    H+ A+V+CEY++A FS  ER++R   +R+S+E++L +++  E AI+ HL PRTQIDIY+ V+Q+DGG     +NAA+LAL DAGV M DLV +C+AGYL+G P++DLNYVE + GGP L VA+LP+ +K+ L +M+S+LPL+ FE VL  A D C+ +   +R A+ EH
Sbjct:   40 MGNTKVLATVYGPHEVSQRSQSLHDRALVHCEYSMATFSTGERRRRPKGDRRSVELSLVIRQSMEAAILTHLLPRTQIDIYVQVLQADGGTRAACINAATLALADAGVPMRDLVASCAAGYLNGTPLLDLNYVEDSAGGPDLTVALLPKAEKVTLLQMDSKLPLDTFEAVLGLAMDGCKAIAAHMRQALLEH 231          
BLAST of mRNA_L-elsbetiae_contig5437.13677.1 vs. uniprot
Match: A0A0D2U8G7_CAPO3 (Exosome component 4 n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2U8G7_CAPO3)

HSP 1 Score: 202 bits (515), Expect = 2.910e-62
Identity = 100/197 (50.76%), Postives = 142/197 (72.08%), Query Frame = 0
Query:    2 GQTKVIAIVKGPREVTRRQDRKHESAIVNCEYNVAPFSGSERKKRRPTERKSMEIALAVKEVFEGAIMLHLYPRTQIDIYLHVIQSDGGVLPVSVNAASLALVDAGVAMSDLVVACSAGYLDGMPVMDLNYVEQALGGPYLPVAVLPEKDKLLLAKMESRLPLEIFEEVLRAATDACQQVHEVLRAAVREHAGGLLS 198
            G TK++A V GP EV+R+    H+ AI+NCEY VA F+ +ERKK   T+++++++A AV+  FEGA+M  LYPR+QIDI+L V+QSDGG   V +NAA+LAL+DAG+AM D V ACS G +D  P++D+NY+E + GGP L VAVL    K +L +M+SRL ++ F++VLR A D CQ +H +L +A+ E    LL+
Sbjct:   46 GNTKILATVYGPHEVSRKNKPLHDRAIINCEYRVASFATAERKKPVRTDKRALDLAAAVRGAFEGAVMTQLYPRSQIDIFLQVLQSDGGNRAVCINAATLALMDAGIAMKDFVCACSVGCIDDTPLLDINYIEDSAGGPDLTVAVLARSRKTVLVEMDSRLHIDRFDDVLRLAIDGCQAIHSILDSAMVERTKALLA 242          
BLAST of mRNA_L-elsbetiae_contig5437.13677.1 vs. uniprot
Match: W7U2L9_9STRA (Exosome complex exonuclease rrp41 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U2L9_9STRA)

HSP 1 Score: 199 bits (507), Expect = 4.310e-61
Identity = 97/200 (48.50%), Postives = 143/200 (71.50%), Query Frame = 0
Query:    2 GQTKVIAIVKGPREVTRRQDRKHESAIVNCEYNVAPFSGSERKKRRPTERKSMEIALAVKEVFEGAIMLHLYPRTQIDIYLHVIQSDGGVLPVSVNAASLALVDAGVAMSDLVVACSAGYLDGMPVMDLNYVEQALGGPYLPVAVLPEKDKLLLAKMESRLPLEIFEEVLRAATDACQQVHEVLRAAVREHAGGLLSSQV 201
            GQT+V+AIV GP EVTRR + +H+  I+ CE+   PFSG +RKKRRPT+R S+E +LA+K+ FE A+M +LYPRTQ+DI ++V+Q DG +LP ++NA SLALVDAGVAM ++V ACS   LD  PV+D+ Y EQ+ GG Y+P+A  P   +++L + E+RL  E  EE++  A +  +QV ++ +  V+E+   L  +++
Sbjct:   46 GQTEVLAIVHGPHEVTRRSEVQHDKCIIECEFYRTPFSGFDRKKRRPTDRASLEASLALKQTFETAVMRNLYPRTQVDIQVYVLQGDGSILPTAINAVSLALVDAGVAMKEMVTACSVALLDKQPVLDVTYKEQSSGGAYMPLAAFPIHGEIILIQCEARLEGERLEEMMLTAMEGSRQVSQLFQTQVKEYTRRLAGARL 245          
BLAST of mRNA_L-elsbetiae_contig5437.13677.1 vs. uniprot
Match: A0A7S2STJ1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STJ1_9STRA)

HSP 1 Score: 198 bits (504), Expect = 6.620e-60
Identity = 96/199 (48.24%), Postives = 139/199 (69.85%), Query Frame = 0
Query:    2 GQTKVIAIVKGPREVTRRQDRKHESAIVNCEYNVAPFSGSERKKRRPTERKSMEIALAVKEVFEGAIMLHLYPRTQIDIYLHVIQSDGGVLPVSVNAASLALVDAGVAMSDLVVACSAGYLDGMPVMDLNYVEQALGGPYLPVAVLPEKDKLLLAKMESRLPLEIFEEVLRAATDACQQVHEVLRAAVREHAGGLLSSQ 200
            GQTKV+A V GPR+V R++D  H+   V   +  APF+  ER ++RP +R+SM +A+ V+E     + + +YP+TQID++++++Q DG  LPV VNAASLAL+DAG+AM D +VACSAG +D   VMD+N  EQ  GG YLPVA+LP  D ++LA+M+ ++PL  F ++L  A   C Q+H++LR  VREH+  L + Q
Sbjct:   44 GQTKVLAQVLGPRDVDRKKDESHDHCQVKVSFTAAPFAALERNRKRPEDRQSMALAMVVQEALMSVVRVEVYPQTQIDVHINLLQDDGSRLPVCVNAASLALMDAGIAMKDFLVACSAGVVDKQAVMDVNRKEQLGGGAYLPVAILPGSDSIVLAEMDCKMPLGNFSDLLSVAMSGCHQMHQILREEVREHSKSLFNMQ 242          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5437.13677.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUB0_ECTSI8.530e-12994.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YHF5_9STRA4.030e-9064.18Ribosomal protein S5 domain 2-type protein n=1 Tax... [more]
A0A7S2V0R5_9STRA2.420e-7656.50Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6V1TQR2_HETAK1.760e-7255.50Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1G3R3_9STRA1.650e-6552.88Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
D2VEP3_NAEGR1.280e-6246.73Predicted protein n=2 Tax=Naegleria TaxID=5761 Rep... [more]
A0A1Y1I745_KLENI2.270e-6251.563'-5'-exoribonuclease family protein n=1 Tax=Klebs... [more]
A0A0D2U8G7_CAPO32.910e-6250.76Exosome component 4 n=1 Tax=Capsaspora owczarzaki ... [more]
W7U2L9_9STRA4.310e-6148.50Exosome complex exonuclease rrp41 n=3 Tax=Monodops... [more]
A0A7S2STJ1_9STRA6.620e-6048.24Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027408PNPase/RNase PH domain superfamilyGENE3D3.30.230.70coord: 1..196
e-value: 5.9E-59
score: 201.4
IPR001247Exoribonuclease, phosphorolytic domain 1PFAMPF01138RNase_PHcoord: 1..108
e-value: 7.8E-27
score: 94.4
IPR015847Exoribonuclease, phosphorolytic domain 2PFAMPF03725RNase_PH_Ccoord: 112..176
e-value: 7.5E-7
score: 29.1
NoneNo IPR availablePANTHERPTHR11953EXOSOME COMPLEX COMPONENTcoord: 1..197
NoneNo IPR availablePANTHERPTHR11953:SF0EXOSOME COMPLEX COMPONENT RRP41coord: 1..197
IPR036345Exoribonuclease, PH domain 2 superfamilySUPERFAMILY55666Ribonuclease PH domain 2-likecoord: 110..193
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 1..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5437contigL-elsbetiae_contig5437:595..9551 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5437.13677.1mRNA_L-elsbetiae_contig5437.13677.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5437 566..10074 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5437.13677.1 ID=prot_L-elsbetiae_contig5437.13677.1|Name=mRNA_L-elsbetiae_contig5437.13677.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=202bp
MGQTKVIAIVKGPREVTRRQDRKHESAIVNCEYNVAPFSGSERKKRRPTE
RKSMEIALAVKEVFEGAIMLHLYPRTQIDIYLHVIQSDGGVLPVSVNAAS
LALVDAGVAMSDLVVACSAGYLDGMPVMDLNYVEQALGGPYLPVAVLPEK
DKLLLAKMESRLPLEIFEEVLRAATDACQQVHEVLRAAVREHAGGLLSSQ
V*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027408PNPase/RNase_PH_dom_sf
IPR001247ExoRNase_PH_dom1
IPR015847ExoRNase_PH_dom2
IPR036345ExoRNase_PH_dom2_sf
IPR020568Ribosomal_S5_D2-typ_fold