prot_L-elsbetiae_contig5430.13670.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5430.13670.1
Unique Nameprot_L-elsbetiae_contig5430.13670.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length206
Homology
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BLAST of mRNA_L-elsbetiae_contig5430.13670.1 vs. uniprot
Match: D8LMM2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMM2_ECTSI)

HSP 1 Score: 201 bits (511), Expect = 4.340e-56
Identity = 130/210 (61.90%), Postives = 150/210 (71.43%), Query Frame = 0 
Query:    1 MDSDSNN--PWTWEDGVREAIERLDFFSSLKNEAGAEE---GGSFSSVVVEEAADVAFQGYKALVAGLPDGSFKSADDLWRGVLVLTLADDGVGEAVARGAIPTAADDDTAANDREMEAVWKRPTVLHLLLRAIQKDRRLRRGVPWVGGRGXXXXXXXXXXXXXXXXXXRKIDLTNDSLSRIVRELMPAAADKNGATCEAWIAAIRKCPW 205
            MD+  N   PW W+D + E+  +L   +SL     AEE   GG      V  AAD+AFQGY+ALVAGLP+ S+  AD LWR V+ LTL D  V EAVA+GA+P+A++  TA +DREMEAVW+RPT LHLLLRAIQKDRRLRRG PW G   XXXXXXXXXXXX       KIDLT++SLS  VRELMPAAAD  GA CEAWIAAIRKCPW
Sbjct: 1024 MDATINGDEPWGWKDALEESTTQL---NSLWQGGPAEEEGEGGVAGVTSVVGAADIAFQGYRALVAGLPEQSYLHADSLWREVIGLTLTDPHVKEAVAKGAMPSASEGRTAVSDREMEAVWERPTALHLLLRAIQKDRRLRRGAPWAGXXXXXXXXXXXXXXXEG-----KIDLTDESLSSTVRELMPAAADGGGALCEAWIAAIRKCPW 1225
[Close]
BLAST of mRNA_L-elsbetiae_contig5430.13670.1 vs. uniprot
Match: A0A6H5JHH9_9PHAE (Nucleoporin_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHH9_9PHAE)

HSP 1 Score: 101 bits (251), Expect = 3.180e-21
Identity = 55/109 (50.46%), Postives = 74/109 (67.89%), Query Frame = 0 
Query:    6 NNPWTWEDGVREAIERLDFFSSLKNEAGAEEGGSFSSVVVEEAADVAFQGYKALVAGLPDGSFKSADDLWRGVLVLTLADDGVGEAVARGAIPTAADDDTAANDREMEA 114
            + PW W+D + E+  +L+          +EEGG    + V  AAD+AFQGY+ALVAGLP+ S+  AD LWR V+ LTL D  V EAVA+GA+P+A++D TA +DREMEA
Sbjct: 1054 DEPWGWKDALEESTSQLNSLWQGGPAEESEEGGVAGVLSVVRAADIAFQGYRALVAGLPEQSYLHADSLWREVIGLTLTDPHVKEAVAKGAMPSASEDRTAVSDREMEA 1162
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5430.13670.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LMM2_ECTSI4.340e-5661.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JHH9_9PHAE3.180e-2150.46Nucleoporin_C domain-containing protein n=1 Tax=Ec... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5430contigL-elsbetiae_contig5430:244..3817 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5430.13670.1mRNA_L-elsbetiae_contig5430.13670.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5430 240..3844 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5430.13670.1 ID=prot_L-elsbetiae_contig5430.13670.1|Name=mRNA_L-elsbetiae_contig5430.13670.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=206bp
MDSDSNNPWTWEDGVREAIERLDFFSSLKNEAGAEEGGSFSSVVVEEAAD
VAFQGYKALVAGLPDGSFKSADDLWRGVLVLTLADDGVGEAVARGAIPTA
ADDDTAANDREMEAVWKRPTVLHLLLRAIQKDRRLRRGVPWVGGRGGGGV
AALRRAGEEEEEERRKIDLTNDSLSRIVRELMPAAADKNGATCEAWIAAI
RKCPW*
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