prot_L-elsbetiae_contig5427.13664.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5427.13664.1
Unique Nameprot_L-elsbetiae_contig5427.13664.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length528
Homology
BLAST of mRNA_L-elsbetiae_contig5427.13664.1 vs. uniprot
Match: D7G3Y1_ECTSI (Tetratricopeptide TPR_2 repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Y1_ECTSI)

HSP 1 Score: 330 bits (846), Expect = 4.240e-96
Identity = 277/479 (57.83%), Postives = 303/479 (63.26%), Query Frame = 0
Query:    1 MDYKALEWSRALKVPVSSPGPCIRFADIKPSVQQRMVSLARQDWMGLRRVLPQLLMATGNADEAEKLLRQQNASGEKSGRDLDLVRRGQGH-GDGAXXXXXXXXXXXXXXXXXXASAVALSSARSELAGLLHGQGKLLEAEELYRSALDLRTAALGLEHPSVGLSATNLSXXXXXXXXXXXXXXXXXXAMNIAASPPRMQQTXXXXXXXXXXXLQQPSLWSSSCGAALVQREQRTPAPAGGGDEVGITVTATATSSRATPNPPLQSPPIGDVLLDDKAAPKNSPTVDYDGLAASGWAGPPXXXXXXXXXXXXXXXXXVGSTAPPIGIGSAXXXXXXXXXASTAGLDAETATVASISANASHXXXXXXXXXXXXXXXXXAA-----PASSGHGRRWGREXXXXXXXXXDDEQEEKMRAEEQKDGCDWELAHSVAVASLNNLAVLLSEQGDAEQAEGFHRRALRAREVVHGPDHPDMPVLL 473
            MDYKALEW+RALKVPVS+ GPC+RF +I+P VQQRMV+LARQDWMGLRRVLPQLL ATGN DEAE+LLRQ NAS EK+ R L   R G G  GD A                   SAVAL+SARSELAGLLH QGKLLEAEELYRSALD+RTAALG+EHPSVGLSA+   XXXXXXXXXXXXXXXXXX+MNI ASPP + Q XXXXXX                           PAP G GD VGI VT  ATSSRATPNPP+ +PP+GD+LLDDKAAPKNSP    D L  +G +                     GS+   +G G A      XXX                      XXXXXXXXXXXXXXXXX       P +         E           E EE  R  E+K G DWELAHSVAVASLNNLAVLLSEQGDAEQAE FHRRALRAREVVHGPDHPD+P+LL
Sbjct: 1944 MDYKALEWARALKVPVSTSGPCVRFDEIRPPVQQRMVALARQDWMGLRRVLPQLLRATGNVDEAERLLRQ-NASEEKAVRVL-AGRAGDGEDGDLARTQ----------------SAVALASARSELAGLLHEQGKLLEAEELYRSALDMRTAALGVEHPSVGLSASXXXXXXXXXXXXXXXXXXXXXSMNITASPPSLPQQXXXXXX-------------------XXXXXXXXPAP-GRGDTVGIMVTTKATSSRATPNPPVATPPVGDLLLDDKAAPKNSP---LDSLVPAGCS-------------------PFGSSGV-VGGGDARAVDDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPTGNSSGLLVVEQELEIRGQQQREAEESPRTSEEKSGRDWELAHSVAVASLNNLAVLLSEQGDAEQAEAFHRRALRAREVVHGPDHPDVPLLL 2361          
BLAST of mRNA_L-elsbetiae_contig5427.13664.1 vs. uniprot
Match: A0A6H5KHL0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHL0_9PHAE)

HSP 1 Score: 179 bits (455), Expect = 1.660e-44
Identity = 190/475 (40.00%), Postives = 209/475 (44.00%), Query Frame = 0
Query:    1 MDYKALEWSRALKVPVSSPGPCIRFADIKPSVQQRMVSLARQDWMGLRRVLPQLLMATGNADEAEKLLRQQNASGEKSGRDLDLVRRGQGHGDGAXXXXXXXXXXXXXXXXXXASAVALSSARSELAGLLHGQGKLLEAEELYRSALDLRTAALGLEHPSVGLSATNLSXXXXXXXXXXXXXXXXXXAMNIAASPPRMQQTXXXXXXXXXXXLQQPSLWSSSCGAALVQREQRTPAPAGGGDEVGITVTATATSSRATPNPPLQSPPIGDVLLDDKAAPKNSPTVDYDGLAASGWAGPPXXXXXXXXXXXXXXXXXVGSTAPPIGIGSAXXXXXXXXXASTAGLDAETATVASISANASHXXXXXXXXXXXXXXXXXAAPASSGHGRRWGREXXXXXXXXXDDEQEEKMRAEEQKDGCD--WELAHSVAVASLNNLAVLLSEQGDAEQAEGFHRRALRAREVVHGPDHPDMPVLL 473
            MDYKALEW+RALKVPVS+  PC+RF +I+P VQQRMV+LARQDWMGLRRVLPQLL ATGN DEAE+LLRQ NAS EK+ R +   R G G  DG                    SAVAL+SARSELAGLLH QGKLLEAEELYR A+ +       EH      A  LS                                                                                                       LDD+    N                  XXXXXXXXXXXXXXXXX                                                      XXXXXXX  P  +  G     +       XX        RA E+K G D  WELAHSVAVASLNNLAVLLSEQGDAEQAE FHRRALRARE+VHGPDHPD+P+LL
Sbjct: 2554 MDYKALEWARALKVPVSTSDPCVRFDEIRPPVQQRMVALARQDWMGLRRVLPQLLRATGNVDEAERLLRQ-NASEEKAVRVI-AGRAGDGE-DGELARTQ--------------SAVALASARSELAGLLHEQGKLLEAEELYRHAMTVP------EHSQRPFDAVLLS------------------------------------------------------------------------------------------------------FLDDEDEESNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------------------------------------------XXXXXXXXPPTGNSGGLLVVEQELEIKGQXXXXXXXXXXRASEEKSGRDRDWELAHSVAVASLNNLAVLLSEQGDAEQAEAFHRRALRARELVHGPDHPDVPLLL 2850          
BLAST of mRNA_L-elsbetiae_contig5427.13664.1 vs. uniprot
Match: A0A6H5KEH7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEH7_9PHAE)

HSP 1 Score: 115 bits (289), Expect = 3.090e-25
Identity = 55/64 (85.94%), Postives = 60/64 (93.75%), Query Frame = 0
Query:  410 RAEEQKDGCDWELAHSVAVASLNNLAVLLSEQGDAEQAEGFHRRALRAREVVHGPDHPDMPVLL 473
            RA E+K G DWELAHSVAVASLNN+AVLLSEQGDAEQAE FHRRALRARE+VHGPDHPD+P+LL
Sbjct:   75 RASEEKSGRDWELAHSVAVASLNNVAVLLSEQGDAEQAEAFHRRALRARELVHGPDHPDVPLLL 138          
BLAST of mRNA_L-elsbetiae_contig5427.13664.1 vs. uniprot
Match: A0A6H5JK27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK27_9PHAE)

HSP 1 Score: 62.4 bits (150), Expect = 1.810e-6
Identity = 51/162 (31.48%), Postives = 75/162 (46.30%), Query Frame = 0
Query:    8 WSRALKVPVSSPGPCIRFADIKPSVQQRMVSLARQDWMGLRRVLPQLLMATGNADEAEKLLRQQNASGEKSGRDLDLVRRGQGHGDGAXXXXXXXXXXXXXXXXXXASAVALSSARSELAGLLHGQGKLLEAEELYRSALDLRTAALGLEHPSVGLSATNLS 169
            W+R L V V+       F ++   V + M+ LARQ+W G    LP++ +A G  +EAEK LRQ     E++      + R +   D                     + + L +A+  L  +L  QGK  EAE LY+++L +    LG EHP V   AT LS
Sbjct:  206 WARDLNV-VTKMQATDLFKNVSRLVMEEMIHLARQNWCGTWHWLPEIQLAAGQYEEAEKGLRQLLLEAEEA------LSRFEDSSD---------------TKESRQALLTLQTAKGTLGFVLQQQGKFAEAESLYKNSLAILEEVLGAEHPDV---ATTLS 342          
BLAST of mRNA_L-elsbetiae_contig5427.13664.1 vs. uniprot
Match: A0A6H5KZG4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZG4_9PHAE)

HSP 1 Score: 59.7 bits (143), Expect = 1.010e-5
Identity = 47/167 (28.14%), Postives = 74/167 (44.31%), Query Frame = 0
Query:    3 YKALEWSRALKVPVSSPGPCIRFADIKPSVQQRMVSLARQDWMGLRRVLPQLLMATGNADEAEKLLRQQ--NASGEKSGRDLDLVRRGQGHGDGAXXXXXXXXXXXXXXXXXXASAVALSSARSELAGLLHGQGKLLEAEELYRSALDLRTAALGLEHPSVGLSATN 167
            +   EW+R LKV  S       F+ +   V + M+ LARQ W      LP+LL+A+G  D+AE+ LRQQ   A  +K G + D   + +                         + + +++ARS L  +L  QGK +E   L    +++    LG +HP   +   N
Sbjct:  231 HAVYEWARDLKV-TSKMRATDLFSTLSREVTEEMIRLARQGWFRTGYCLPELLLASGQYDQAEEGLRQQLSEAENDKQGVEDDDSNKSR------------------------RALLGVNTARSNLGAVLREQGKYVEVGRLCLRDVEMGEDTLGPDHPDFAIRLNN 372          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5427.13664.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G3Y1_ECTSI4.240e-9657.83Tetratricopeptide TPR_2 repeat protein n=1 Tax=Ect... [more]
A0A6H5KHL0_9PHAE1.660e-4440.00Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KEH7_9PHAE3.090e-2585.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JK27_9PHAE1.810e-631.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZG4_9PHAE1.010e-528.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 428..461
e-value: 12.0
score: 14.4
coord: 470..503
e-value: 13.0
score: 14.0
coord: 120..153
e-value: 44.0
score: 9.4
NoneNo IPR availablePFAMPF13424TPR_12coord: 429..501
e-value: 6.7E-16
score: 58.4
coord: 121..192
e-value: 1.1E-9
score: 38.5
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 125..192
coord: 424..519
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 107..235
e-value: 1.4E-15
score: 59.1
coord: 401..526
e-value: 2.1E-28
score: 101.2
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 429..515
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 55..192

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5427contigL-elsbetiae_contig5427:2606..10555 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5427.13664.1mRNA_L-elsbetiae_contig5427.13664.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5427 335..11043 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5427.13664.1 ID=prot_L-elsbetiae_contig5427.13664.1|Name=mRNA_L-elsbetiae_contig5427.13664.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=528bp
MDYKALEWSRALKVPVSSPGPCIRFADIKPSVQQRMVSLARQDWMGLRRV
LPQLLMATGNADEAEKLLRQQNASGEKSGRDLDLVRRGQGHGDGADGGGE
GGEEEEEEEKARTASAVALSSARSELAGLLHGQGKLLEAEELYRSALDLR
TAALGLEHPSVGLSATNLSGVLRDQGRRAEATSIMRAAMNIAASPPRMQQ
TQQQQQQQQQQRLQQPSLWSSSCGAALVQREQRTPAPAGGGDEVGITVTA
TATSSRATPNPPLQSPPIGDVLLDDKAAPKNSPTVDYDGLAASGWAGPPP
PRAYGSGGGSSSDGGGVGSTAPPIGIGSAAAAVVAAASASTAGLDAETAT
VASISANASHAALAAASKSSTGSTNAAAAPASSGHGRRWGREEGGEEGGQ
ADDEQEEKMRAEEQKDGCDWELAHSVAVASLNNLAVLLSEQGDAEQAEGF
HRRALRAREVVHGPDHPDMPVLLSNLAGTLYIQGKDSEAEPLHERALQLR
EALLGSTHPDVATSLEFLTRMAIKSGA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf