mRNA_L-elsbetiae_contig5426.13663.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5426.13663.1 vs. uniprot
Match: D8LKW6_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKW6_ECTSI) HSP 1 Score: 246 bits (628), Expect = 1.300e-72 Identity = 262/447 (58.61%), Postives = 307/447 (68.68%), Query Frame = 3 Query: 87 MADTEERAALNGLEKKLFKLMCKGATKAQWTEWLRAPLEHALAKGDKSLALALLAAGADGSAGWKGCGGRTLLGAAAEGGSHEAVSAVLEAGGLEELDTVSGDKGMVALHHAIAGGHTDAARVLMVAGANVGLLDGRGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGADPNVFNVFYDYGE----SPLSLAGRNLAITRSLLEHGADGKLVDEGGYTALHNVGQD--------------GDADVIEALVEAGVDVEAKSGSFCSIFGGFYTELAPLHVAALNCYPVGISTLLRQGADVNAKSGEGQTPLHLVCRRRDEICDEDTMAAIADLLXXXXXXXXXXXXXXXXXE-QLVKRDWVARPLQEVLANAPADRAWRRRGMLVMCRA 1370 MA E+R ALNGLEK LFKL+ + A AQW+EWLRAPLEHA+A+GD LALALL AGADGSAGW+GCG RTLL AAAEGG+ E V +L+ GG+EELD VSGD ALH A+AGGHT+AARVLM+AGA+VGLLD +GR XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX YG SPL A N+A+TR+LLE+GAD + G+TALH + +A VI AL+EAG D+EA+SG F T L PLHVAA + ++ LLR+GADVNA+S G TPLH++C + + +DT ADLL + ++V ++ L+ +L AP DRAWRRRG L+MCRA Sbjct: 1 MAAEEDRTALNGLEKMLFKLVSEKAASAQWSEWLRAPLEHAVAEGDNDLALALLKAGADGSAGWEGCGDRTLLQAAAEGGNEEVVLTLLDNGGVEELDVVSGDNERTALHRALAGGHTEAARVLMLAGADVGLLDVKGR-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGRLRDRSPLFFAHENVAMTRTLLEYGADVLSFNHLGFTALHTAATEVFWHFSPILVKYAWANAKVIGALLEAGADLEARSGEVFRDSHRF-TGLTPLHVAAYH-QKASMAELLRKGADVNAESDNGLTPLHMLCMK-PRLNPDDT----ADLLLRWGADETAIDNEGYTPKARIVGSSNGSQALRHMLDKAPVDRAWRRRGTLIMCRA 435
BLAST of mRNA_L-elsbetiae_contig5426.13663.1 vs. uniprot
Match: D8LH19_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH19_ECTSI) HSP 1 Score: 211 bits (538), Expect = 1.830e-59 Identity = 267/437 (61.10%), Postives = 309/437 (70.71%), Query Frame = 3 Query: 87 MADTEER-AALNGLEKKLFKLMCKGATKAQWTEWLRAPLEHALAKGDKSLALALLAAGADGSAGWKGCGGRTLLGAAAEGGSHEAVSAVLEAGGLEELDTVSGDKGMVALHHAIAGGHTDAARVLMVAGANVGLLDGRGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGADPNVFNVFYDYGES----PLSLA--GRNLAITRSLLEHGADGKLVDEGGYTALHNVGQDGDADVIEALVEAGVDVEAKSGS-FCSIFGGFYTELAPLHVAAL--NCYPVGISTLLRQGADVNAKSGEGQTPLHLVCRRRDEICDEDTMAAIADLLXXXXXXXXXXXXXXXXXEQLVKRDWVARPLQEVLANAPADRAWRRRGMLVMCR 1367 MA+ +ER AAL G E++LFKL+ + AT AQW EWLRAPLEHA+A+G++ LA LL AGADG AGWKGC GR+LL A +GG+ + VSA+LEAG L +++ V+G LH AIAGGHT ARVLM+AGA V LLD XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DP+ YG S PL LA R A+TR+LL+HGAD K D G+TALH G VIEALV AG D+EA+S + + L PLH+AA ++ LL++GADVNA G G+TPLH+V + + A I XXXXXXXXXXXXXXXXX +V R A PL+ +L APADRAWRRRG LV+ R Sbjct: 1 MANFDERTAALGGTEEQLFKLVSRHATPAQWAEWLRAPLEHAVAEGNQHLASTLLRAGADGGAGWKGCDGRSLLDVAVQGGNSKTVSALLEAGSLGDVNAVTGSDRRSPLHRAIAGGHTAVARVLMLAGAGVSLLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPSA-----RYGSSLKFSPLQLACSSREAAMTRALLKHGADVKSCDGFGFTALHWAAYRGKPCVIEALVGAGADLEARSSQVWLPGHRDSHVGLTPLHIAAFFRRSNTPRMALLLQRGADVNAADGHGRTPLHIVAAAP---ATDSSAADIDFXXXXXXXXXXXXXXXXXXXXXVVTRSSSAEPLKRLLRRAPADRAWRRRGPLVLSR 429
BLAST of mRNA_L-elsbetiae_contig5426.13663.1 vs. uniprot
Match: D8LDP2_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDP2_ECTSI) HSP 1 Score: 209 bits (531), Expect = 9.180e-59 Identity = 226/362 (62.43%), Postives = 259/362 (71.55%), Query Frame = 3 Query: 87 MADTEERAALNGLEKKLFKLMCKGATKAQWTEWLRAPLEHALAKGDKSLALALLAAGADGSAGWKGCGGRTLLGAAAEGGSHEAVSAVLEAGGLEELDTVSGDKGMVALHHAIAGGHTDAARVLMVAGANVGLLDGRGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGADPNV-FNVFYDYGESPLSLA-GRNLAITRSLLEHGADGKLVDEGGYTALHNVGQDGDADVIEALVEAGVDVEAKSGS--FCSIFGGF--YTELAPLHVAAL--NCYPVGISTLLRQGADVNAKSGEGQTPLHLV 1148 MA E+R AL GLEK+LFKL+ + AT AQW+EWLRAPLEHA+A+GDK LAL LL AGA+G +GW+GC RTLL AAAEGG+ E VS +L GGLEE+D SGD+ ALH A+ GGHT AAR LMVAG++ LLD XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AGADPNV F Y SPL LA GR+LA R LL+HGA+ D+ G+TALH + I+ LVEAG D+EA S S GG + + LHVAA NC V ++ LLR GA+V+A+S G TPLH+V Sbjct: 1 MAAKEDRTALKGLEKRLFKLVSEKATSAQWSEWLRAPLEHAVAEGDKDLALTLLKAGANGGSGWEGCNDRTLLQAAAEGGNEEVVSTLLGKGGLEEIDVASGDQDRTALHRALIGGHTGAARALMVAGSDTSLLDTEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCDRLTVAEALLTAGADPNVRFGKSKIY--SPLFLAVGRSLATMRVLLQHGANVNSPDDLGFTALHWAADFDASAEIDVLVEAGADLEASSSSVHLKDKIGGINSFVGITLLHVAAYFHNC--VAMAALLRNGANVDAESDNGLTPLHMV 358
BLAST of mRNA_L-elsbetiae_contig5426.13663.1 vs. uniprot
Match: D7FYG4_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYG4_ECTSI) HSP 1 Score: 184 bits (467), Expect = 5.280e-49 Identity = 237/435 (54.48%), Postives = 271/435 (62.30%), Query Frame = 3 Query: 84 VMADTEERAALNGLEKKLFKLMCKG----ATKAQWTEWLRAPLEHALAKGDKSLALALLAAGADGSAGWKGCGGRTLLGAAAEGGSHEAVSAVLEAGGLEELDTVSGDKGMVALHHAIAGGHTDAARVLMVAGANVGLLDGRGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGADPNVFNVFYDYGESPLSLAGRNLAITRSLLEHGADGKLVDEGGYTALHNVGQDGDADVIEALVEAGVDVEAKS-GSFCSIFGGFYTELAPLHVAALNCYPVGISTLLRQGADVNAKSGEGQTPLHLVCRRRDEICDEDTMAAIADLLXXXXXXXXXXXXXXXXXEQLVKR-DWVARPLQEVLANAPADRAWRRRGMLVMCRA 1370 MA E+R AL LE L + C T AQW EWLRAPLEHA+A+GDK LAL LL AGA+G +GWKGC RTLL AAAEGG+ E V +L+ G+EE+D VS D+G LH A AGGHT+AARVLM+AGA+VGL+D +G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GAD K VD G+TALH DG +V+ ALVE G DVEA+ S LHVAA + LL++GA+ NA +G PLHLVC+ + A+ADLL ++ D LQ +LANAPA RAWRRRGM++M RA Sbjct: 8 TMATEEDRTALGRLETILLSINCSNWCGRTTSAQWAEWLRAPLEHAVAEGDKDLALTLLNAGANGGSGWKGCNDRTLLQAAAEGGNEEVVRTLLDIEGMEEVDAVSSDEGGTELHRAAAGGHTNAARVLMLAGASVGLVDSKGI-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSGADVKSVDRLGHTALHWAAFDGIQEVVHALVEVGADVEARCLAQLLSEQRHSLKGSTSLHVAAYWETLDTMLALLQKGANANAPDDDGHGPLHLVCKY-----PKARSVAVADLLLRWGAEETATDNDGNTPADFIQSSDESDGRLQRLLANAPAGRAWRRRGMVIMLRA 436
BLAST of mRNA_L-elsbetiae_contig5426.13663.1 vs. uniprot
Match: A0A6H5JQI2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQI2_9PHAE) HSP 1 Score: 148 bits (373), Expect = 9.380e-37 Identity = 125/331 (37.76%), Postives = 149/331 (45.02%), Query Frame = 3 Query: 171 QWTEWLRAPLEHALAKGDKSLALALLAAGADGSAGWKGCGGRTLLGAAAEGGSHEAVSAVLEAGGLEELDTVSGDKGM-VALHHAIAGGHTDAARVLMVAGANVGLLDGRGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGADPNVFNVFYDYGE----SPLSLAGRNLAITRSLLEHGADGKLVDEGGYTALHNVGQDGDADVIEALVEAGVDVEAKS-GSFCSIFGGFYTELAPLHVAALNCYPVGISTLLRQGADVNAKSGEGQTPLHL 1145 QW EWLR PLEHA+A+GDK LAL LL AGA G +GWKGC TLL AAEGG+ V +L+ G EELD VSGDK ALH A AGG+TDAAR+L +AGA G L G AG DPNV YG SPL+LA N A+TR+LL GAD K V E G+ +LH G +V++ALVE VEA+S G S + LAPLHVAA + LL+ G + N +G+ PLHL Sbjct: 42 QWAEWLRIPLEHAVAEGDKDLALTLLKAGASGGSGWKGCDDPTLLQVAAEGGNEVVVRTLLDIAGTEELDAVSGDKDKRTALHSAAAGGYTDAARMLELAGAKGGHLQLAG------------------DFVIAGADLEAKDGDGNTPLHFAAAHDSDTFIGTLRRGVCVLVVSNKGEHPLHIAVDHDDMTVRKALLKAGTDPNV-----RYGSDKIFSPLNLARGNAAMTRTLLGSGADVKSVCELGHASLHWAAGHGVLEVVDALVEGRAKVEARSLGVVLSEQDHGFQGLAPLHVAAYWEKLGTLLALLQDGTNANTPDTDGRGPLHL 349
BLAST of mRNA_L-elsbetiae_contig5426.13663.1 vs. uniprot
Match: A0A6H5K4P5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4P5_9PHAE) HSP 1 Score: 147 bits (371), Expect = 4.810e-36 Identity = 152/446 (34.08%), Postives = 197/446 (44.17%), Query Frame = 3 Query: 87 MADTEERAALNGLEKKLFKLMCKGATKAQWTEWLRAPLEHALAKGDKSLALALLAAGADGSAGWKGCGGRTLLGAAAEGGSHEAVSAVLEAGGLEELDTVSGDKGMVALHHAIAGGHTDAARVLMVAGANVGLLDGRGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGADPNVFNVFYDYGE-SPLSLAGRNLAITRSLLEHGADGKLVDEGGYTALHNVGQD--------------GDADVIEALVEAGVDVEAKSGSFCSIFGGF--YTELAPLHVAALNCYPVGISTLLRQGADVNAKSGEGQTPLHLVCRRRDEICDEDTMAAIADLLXXXXXXXXXXXXXXXXXEQLVK-RDWVARPLQEVLANAPADRAWRRRGMLVMCRA 1370 MA E+R ALNGLE+ LFKL+ + A AQW++WL APL+HA+A+GDK ALALL AGADG + TLL A+GG A+ L GL LD KG ALH+AI GGH A ++ GA+ D G GA N N + E SPL A A+TR+LLE+GAD VD+ G+TALH + +A VI+ L+EA VD+EA+S F F G + L PLH+AA + V ++ L R+GA NAK +G+TPLH++C ++ DT+ DLL E LV R +R L+++L AP DRAWRR G LVMCRA Sbjct: 1 MAAEEDRTALNGLERTLFKLVSEKAASAQWSKWLGAPLQHAVAEGDKDRALALLKAGADGRGNKEMV--STLL---AKGGERTALHGALADVGL--LDA----KGRSALHYAIEGGHLQLAGDAVIGGADPKAKDIDGN------------------------------------------------------------------TPLHFAAAYDDDKFVGTLLRRGAQVNAANNEGNLNERSPLFFAHDQAAMTRTLLEYGADILSVDQLGFTALHAAAVEVFGYFSPRLLMWNAENAKVIDTLLEARVDLEARSVEF---FEGSQRFRGLTPLHLAAYH-QKVSMAELSRKGAVDNAKCDDGRTPLHMLCTN-PKLNSWDTV----DLLLRWGADETAIDNEGYTPEALVVGRSNRSRALRQMLDKAPEDRAWRRWGTLVMCRA 360
BLAST of mRNA_L-elsbetiae_contig5426.13663.1 vs. uniprot
Match: D8LCR2_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCR2_ECTSI) HSP 1 Score: 134 bits (337), Expect = 1.590e-31 Identity = 187/357 (52.38%), Postives = 225/357 (63.03%), Query Frame = 3 Query: 333 EAVSAVLEAGGLEELDTVSGDKGMVALHHAIAGGHTDAARVLMVAGANVGLLDGRGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGADPNVFNVFYD--YGESPLSLAGRNLAITRSLLEHGADGKLVDEGGYTALHNVGQDGDADVIEALVEAGVDVEAKSGSFCSIF--GGFYTE-LAPLHVAALNCYPVGISTLLRQG-ADVNAKSGEGQTPLHLVCRRRDEICDEDTMAAIADLLXXXXXXXXXXXXXXXXXEQLVKRD-----WVARPLQEVLANAPADRAWRRRGMLVMCRA 1370 E + VL+ G+ E+D VSG +G ALH+A AGGH DA RVLM AGA V L+D XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AGA PNV D SPL LA RN A+T +L+ GAD VD GY+ALH +DG +DV++AL+E G DVEA++ S + GG + + PLH AA G+ LL++G A+ NA+ G +PLH++C ++C + AA +D+L ++ W LQ++LANAPADRAWRRRG LVM RA Sbjct: 4 EVIRTVLDIEGVGEVDAVSGHEGRTALHYAAAGGHADAGRVLMFAGAKVDLVDADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKMEHVGVAKALLKAGAGPNVLFTTGDPTVRFSPLYLARRNAAMTSALVGMGADVTSVDNIGYSALHWAVRDGRSDVVDALIEVGADVEARTSRMISYYSDGGHCMKGMTPLHEAAYQGNYPGMLVLLQKGRANANAQDEHGHSPLHILCMN-PQVC---SAAACSDILLRSGADETATDEDRHTPADIMASSEGHNGW----LQQLLANAPADRAWRRRGTLVMLRA 352
BLAST of mRNA_L-elsbetiae_contig5426.13663.1 vs. uniprot
Match: A0A6H5K1F4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1F4_9PHAE) HSP 1 Score: 126 bits (317), Expect = 6.550e-28 Identity = 128/462 (27.71%), Postives = 186/462 (40.26%), Query Frame = 3 Query: 102 ERAALNGLEKKLFKLMCKGATKAQWTEWLRAPLEHALAKGDKSLALALLAAGADGSAGWKGCGGRTLLGAAAEGGSHEAVSAVLEAGGLEELDTVSGDKGMVALHHAIAGGHTDAARVLMVAGANVGLLDGRGR--GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGADPNVFNVFYDYGESPLSLAGRNLAITR-------SLLEHGADGKLVDEGGYTALHNVGQDGDADVIEALVEAGVDVEAKSGSFCSIFGGFYTELAPLHVAALNCYPVGISTLLRQGADVNAKSGEGQTPLHLVCRRRDEICDEDTMAAIADLLXXXXXXXXXXXXXXXXXEQLVK---------------------------RDWVARPLQE---VLANAPADRAWRRRGMLVMCRA 1370 +RA L G E ++FKL+ GAT QW EWLRAPLEHA A+G+ L LL AGA+G AGW+GC GRT+L AAA GG+ + V+ +L +G +++ VS ALH A GH AA+ L++AGA+V +D AGAD N+ + G + L + ++A+++ +++E+G + + D G TALH+ A ++ L++AG DV AK+ C GF PL V ++ + LL++G +VN + G + LHL C D + DLL ++K D + + +Q +LA APADR WRRR LVM RA Sbjct: 6 KRALLEGAELEIFKLLYFGATPEQWAEWLRAPLEHAAARGNLGLVERLLNAGANGGAGWRGCRGRTMLDAAALGGNPDVVATLLASGCASDVNVVSLSSRRSALHVASVCGHEAAAKKLIIAGADVNRVDPGDACVSLHVAVEGRHGDLVDLLLIGGACPNSRTMSGRTPLHLAAASGNNRVVSTLLGNAMTDVDALDSRGVSPLMVASEGGHCSTVEALLRAGADMNLRHA----GGAHLGMTAMDVAVSKGHVGVIEAIVENGGNVRATDTYGLTALHHARG---AQAVDVLLDAGADVNAKA---CPALHGF----TPLSVCVMDNSCEAVVALLKRGGNVNDTNCGGLSALHLTCGSLSRGMDR-----MVDLLLRWGASETAVNKNGLTPSDILKVTTAEYHARDAGGDGSATRCVGGSATRHDSLTKEIQRARVLLARAPADRTWRRRCWLVMLRA 448
BLAST of mRNA_L-elsbetiae_contig5426.13663.1 vs. uniprot
Match: D8LQN0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN0_ECTSI) HSP 1 Score: 125 bits (313), Expect = 1.690e-27 Identity = 214/459 (46.62%), Postives = 276/459 (60.13%), Query Frame = 3 Query: 81 GVMADTEERAALNGLEKKLFKLMCKGATKAQWTEWLRAPLEHALAKGDKSLALALLAAGADGSAGWKGCGGRTLLGAAAEGGSHEAVSAVLEAGGLEELDTVSGDKGMVALHHAIAGGHTDAARVLMVAGANVGLLDGRGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGADPNVFNVFYDYGE-SPLSLA-GRNLA-ITRSLLE-HGADGKLVDEGGYTALHNVGQDGDA-----DVIEALVEAGVDVEAK-SGSFCSIFGGFYTELAPLHVAALNCYPVGIST---LLRQGADVNAKSGEGQTPLHLVCRR-------------RDEIC---DEDTMAAIADLLXXXXXXXXXXXXXXXXXEQLVKRDWVARPLQEVLANAPADRAWRRRGMLVMCRA 1370 G + E+R+ L G E ++FKL+ + AT QW EWLRAPLEHA A+G+ L L+ AGA+ AGW+GC GRTLLGAAA G S + + +L AG ++++ + G + ALH A A G D R LM+AGA+ + D GR XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A+ + ++ + SPL +A GR A + ++LL+ ++ ++ G+ ALH V + D + L+ AG DV K + C+ PLH+A +N + T LL GA++NA++ TPLH+ C R DE D DT A + +L +R+ + + +LA APADR+WRRRG LV+ R+ Sbjct: 3 GSNREEEDRSRLVGFEIEIFKLLRREATPEQWKEWLRAPLEHAAAEGNLDLFTRLMDAGANTEAGWRGCHGRTLLGAAALGRSEKMIRTLLTAGATDDVNVLFGGESESALHVAAARGADDTCRALMIAGADPNVRDRVGRSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANCGLRSMCTNGSRCSPLEIAAGRGHADVLKALLDKRSSEVDTANDLGWAALHYVASFDETVRDKGDAVRVLLGAGADVNVKGTNDSCA---------TPLHLA-VNRWMTSTGTICALLEGGANINARTAGDDTPLHIACTRLRGSVVELLLRWGADEKLPNNDGDTPADVVGVLEQNDLDDE-------------EREADNQRIHRMLARAPADRSWRRRGWLVLSRS 438
BLAST of mRNA_L-elsbetiae_contig5426.13663.1 vs. uniprot
Match: D8LD22_ECTSI (MHC_I C-terminus family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD22_ECTSI) HSP 1 Score: 119 bits (297), Expect = 2.900e-25 Identity = 210/452 (46.46%), Postives = 258/452 (57.08%), Query Frame = 3 Query: 78 AGVMADTEERAALNGLEKKLFKLMCKGATKAQWTEWLRAPLEHALAKGDKSLALALLAAGADGSAGWKGCGGRTLLGAAAEGGSHEAVSAVLEAGGLEELDTVSGDKGMVALHHAIAGGHTDAARVLMVAGANVGLLDGRGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGADPNVFNVFYDYGESPLSLAGRNLAITRSLLEHGADGKLV---DEGGYTALHNV------GQDGDADVIEALVEAGVDVEAKSGSFCSIFGGFYTELAPLHVAALNCYPVG--ISTLLRQGADVNAKSGEGQTPLHLVCRRRDEICDEDTMAAIADLLXXXXXXXXXXXXXXXXXEQLVKRDWVA----------RPLQEVLANAPADRAWRRRGMLVMCRA 1370 A +++R ++G E ++FKL+ + AT QW EWLRAPLEHA A G+ L L+ AGA AGW+GC GRTLLGAAA + + + A+L AG +++ + G K ALH A A G +A++ LM+AGAN L G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX I ++ L+ D LV D GYTALH+ G+D D + L+ AG DV AK+ + APLH+A P I LL GADVN + E +TPLH E C ++AA+ LL + + V + + ++LA APADR+WRRR LV+ R+ Sbjct: 4 AAASQQSQDRTRVDGFEVEIFKLVQREATSKQWKEWLRAPLEHAAASGNLGLFTRLMDAGASAEAGWRGCDGRTLLGAAACSKNKKILRALLTAGAKSDVNVLFGAKRESALHLAAARGAEEASKALMIAGANPNLR-GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIVKAFLD--TDTSLVNATDHYGYTALHHAALIEVHGRD-KGDAVRVLLAAGADVHAKTTDD-------HLRCAPLHIAVCGRVPSTGTIRALLEGGADVNVRDIEDRTPLH-------EACTYSSVAAVELLLRWGADEKLTDDGDVTPADMIGTSGDVGSDHGDIEADGQRIHQMLARAPADRSWRRRSWLVLSRS 437 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5426.13663.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5426.13663.1 >prot_L-elsbetiae_contig5426.13663.1 ID=prot_L-elsbetiae_contig5426.13663.1|Name=mRNA_L-elsbetiae_contig5426.13663.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=428bp MADTEERAALNGLEKKLFKLMCKGATKAQWTEWLRAPLEHALAKGDKSLAback to top mRNA from alignment at L-elsbetiae_contig5426:4840..6895- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5426.13663.1 ID=mRNA_L-elsbetiae_contig5426.13663.1|Name=mRNA_L-elsbetiae_contig5426.13663.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2056bp|location=Sequence derived from alignment at L-elsbetiae_contig5426:4840..6895- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5426:4840..6895- >mRNA_L-elsbetiae_contig5426.13663.1 ID=mRNA_L-elsbetiae_contig5426.13663.1|Name=mRNA_L-elsbetiae_contig5426.13663.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2568bp|location=Sequence derived from alignment at L-elsbetiae_contig5426:4840..6895- (Laminarionema elsbetiae ELsaHSoW15)back to top |