mRNA_L-elsbetiae_contig5423.13660.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5423.13660.1
Unique NamemRNA_L-elsbetiae_contig5423.13660.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig5423.13660.1 vs. uniprot
Match: A0A6H5JNE7_9PHAE (Phosphate transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNE7_9PHAE)

HSP 1 Score: 373 bits (957), Expect = 1.750e-125
Identity = 189/211 (89.57%), Postives = 200/211 (94.79%), Query Frame = 1
Query:    1 MNQMNQDIHSSVKQSEYVSAIHDNAEKFDPRAEEAFKYVQVFTAICDSFSHGANDVANAMGPFSGIYLVYTTGVVSKEGDLGSNSFWILGLGGLGIVAGLAIYGYKIIAAIGVKIAKITPSRGFAIELGSAMMVIIGSRLEIPLSTTHCQVGATTGVALLEGTGGVNKAVLAKTVFGWIITIVVCALSCSVLFAQGAYAPYVYDTIDLPAS 633
            MNQMNQDIHSSVK SEYVS IHDNAEKFDPRAEEAFKYVQVFTAICDSFSHGANDVANAMGPF+GIY+VYTTG V+ EGDLG+++FWIL LGG+GIVAGLAIYGYKIIAAIGVKIAKITPSRGFAIELGSAMMVIIG+RLEIPLSTTHCQVGATTGVALLEG GGVN  VLAK VFGWIITIVVCAL+CSV+FAQGAYAPYVYDTI LP +
Sbjct:  295 MNQMNQDIHSSVKDSEYVSQIHDNAEKFDPRAEEAFKYVQVFTAICDSFSHGANDVANAMGPFAGIYIVYTTGEVTTEGDLGNDAFWILALGGIGIVAGLAIYGYKIIAAIGVKIAKITPSRGFAIELGSAMMVIIGTRLEIPLSTTHCQVGATTGVALLEGAGGVNGTVLAKAVFGWIITIVVCALTCSVIFAQGAYAPYVYDTIILPET 505          
BLAST of mRNA_L-elsbetiae_contig5423.13660.1 vs. uniprot
Match: D7G0K9_ECTSI (Phosphate transporter n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0K9_ECTSI)

HSP 1 Score: 373 bits (957), Expect = 1.800e-125
Identity = 185/211 (87.68%), Postives = 199/211 (94.31%), Query Frame = 1
Query:    1 MNQMNQDIHSSVKQSEYVSAIHDNAEKFDPRAEEAFKYVQVFTAICDSFSHGANDVANAMGPFSGIYLVYTTGVVSKEGDLGSNSFWILGLGGLGIVAGLAIYGYKIIAAIGVKIAKITPSRGFAIELGSAMMVIIGSRLEIPLSTTHCQVGATTGVALLEGTGGVNKAVLAKTVFGWIITIVVCALSCSVLFAQGAYAPYVYDTIDLPAS 633
            +NQ+N+D+HSSVK+SEYVS IHDNAE+FDPRAEEAFKYVQVFTAICDSFSHGANDVANAMGPF+ IY+VYTTGVVS EGDLG N+FWIL LGG GIV GLAIYGYKIIAAIGVKIAKITPSRGFAIELGSAMM+IIG+RLEIPLSTTHCQVGATTGVALLEGTGGVN  VL K VFGWIITI+VCAL+CSV+FAQGAYAPYVYDTIDLP S
Sbjct:  296 INQLNKDVHSSVKESEYVSQIHDNAEQFDPRAEEAFKYVQVFTAICDSFSHGANDVANAMGPFASIYIVYTTGVVSSEGDLGDNAFWILALGGFGIVTGLAIYGYKIIAAIGVKIAKITPSRGFAIELGSAMMIIIGTRLEIPLSTTHCQVGATTGVALLEGTGGVNGTVLGKAVFGWIITIIVCALTCSVIFAQGAYAPYVYDTIDLPTS 506          
BLAST of mRNA_L-elsbetiae_contig5423.13660.1 vs. uniprot
Match: A0A6H5JNL8_9PHAE (Phosphate transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNL8_9PHAE)

HSP 1 Score: 367 bits (943), Expect = 3.600e-124
Identity = 186/211 (88.15%), Postives = 197/211 (93.36%), Query Frame = 1
Query:    1 MNQMNQDIHSSVKQSEYVSAIHDNAEKFDPRAEEAFKYVQVFTAICDSFSHGANDVANAMGPFSGIYLVYTTGVVSKEGDLGSNSFWILGLGGLGIVAGLAIYGYKIIAAIGVKIAKITPSRGFAIELGSAMMVIIGSRLEIPLSTTHCQVGATTGVALLEGTGGVNKAVLAKTVFGWIITIVVCALSCSVLFAQGAYAPYVYDTIDLPAS 633
            MNQ+NQDIHSSVK S YVS IHDNAEKFDPRAEEAFKYVQVFTAICDSFSHGANDVANAMGPF+ IYLVY+TGVVS EGDLG ++FWIL LGG GIVAGLAIYGYKIIAAIGVKIAKITPSRGFAIELGSAMMVIIG+RLEIPLSTTHCQVGATTGVALLEG GGVN  VLAK VFGWI+TI+VCAL+CSV+FAQGAYAPYVYDTI LP +
Sbjct:  239 MNQINQDIHSSVKDSGYVSQIHDNAEKFDPRAEEAFKYVQVFTAICDSFSHGANDVANAMGPFAAIYLVYSTGVVSSEGDLGDDAFWILALGGFGIVAGLAIYGYKIIAAIGVKIAKITPSRGFAIELGSAMMVIIGTRLEIPLSTTHCQVGATTGVALLEGAGGVNGTVLAKAVFGWIVTIIVCALTCSVIFAQGAYAPYVYDTIILPET 449          
BLAST of mRNA_L-elsbetiae_contig5423.13660.1 vs. uniprot
Match: D7FWT9_ECTSI (Phosphate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWT9_ECTSI)

HSP 1 Score: 344 bits (882), Expect = 5.630e-114
Identity = 171/211 (81.04%), Postives = 189/211 (89.57%), Query Frame = 1
Query:    1 MNQMNQDIHSSVKQSEYVSAIHDNAEKFDPRAEEAFKYVQVFTAICDSFSHGANDVANAMGPFSGIYLVYTTGVVSKEGDLGSNSFWILGLGGLGIVAGLAIYGYKIIAAIGVKIAKITPSRGFAIELGSAMMVIIGSRLEIPLSTTHCQVGATTGVALLEGTGGVNKAVLAKTVFGWIITIVVCALSCSVLFAQGAYAPYVYDTIDLPAS 633
            MNQMNQDI+SSVK SEYV+ IHDNAEKFDPR EE FKYVQ+FTAICDSFSHGANDVANAMGPF+ IY VYTTG V ++G+LG+N+FWIL  GGLG+VAGLA+YGY IIAAIGVKIAKITPSRGFAIELGSA+ VIIG+RLEIPLSTTHCQVGAT GVALLEG+GGVN  VLAK +FGW++TIVVC L+CS LFAQGAYAPY YD ID  AS
Sbjct:  306 MNQMNQDIYSSVKDSEYVNQIHDNAEKFDPRTEEVFKYVQIFTAICDSFSHGANDVANAMGPFASIYFVYTTGEVREDGNLGNNAFWILAFGGLGMVAGLALYGYNIIAAIGVKIAKITPSRGFAIELGSALTVIIGTRLEIPLSTTHCQVGATAGVALLEGSGGVNGIVLAKAIFGWVVTIVVCGLTCSALFAQGAYAPYAYDIIDDLAS 516          
BLAST of mRNA_L-elsbetiae_contig5423.13660.1 vs. uniprot
Match: D7FZJ7_ECTSI (Phosphate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZJ7_ECTSI)

HSP 1 Score: 310 bits (794), Expect = 7.650e-101
Identity = 151/209 (72.25%), Postives = 181/209 (86.60%), Query Frame = 1
Query:    7 QMNQDIHSSVKQSEYVSAIHDNAEKFDPRAEEAFKYVQVFTAICDSFSHGANDVANAMGPFSGIYLVYTTGVVSKEGDLGSNSFWILGLGGLGIVAGLAIYGYKIIAAIGVKIAKITPSRGFAIELGSAMMVIIGSRLEIPLSTTHCQVGATTGVALLEGTGGVNKAVLAKTVFGWIITIVVCALSCSVLFAQGAYAPYVYDTIDLPAS 633
            Q++QD+H++VK ++YV AIH+NAE+ DPR E+AFKYVQVFTAICDSFSHGANDVANAMGPF+ IY+VYTTGVV +E +LG++ FWIL LGG GIVAGL IYGYKII+AIGVKI K+TPSR F+I+LGSA+M+IIG+RLEIP S THC+VGATTGVALLEG  G+N  V+ KTV GWI T +VC ++CS LFAQGAYAPY YDTID+  S
Sbjct:  298 QLDQDVHATVKDNDYVDAIHENAERSDPRTEQAFKYVQVFTAICDSFSHGANDVANAMGPFASIYIVYTTGVVEEEKNLGNDMFWILALGGAGIVAGLTIYGYKIISAIGVKIPKVTPSRCFSIKLGSAIMIIIGTRLEIPFSPTHCKVGATTGVALLEGLDGINLNVVGKTVLGWITTSLVCGITCSGLFAQGAYAPYAYDTIDMSPS 506          
BLAST of mRNA_L-elsbetiae_contig5423.13660.1 vs. uniprot
Match: A0A7S4F699_CHRCT (Phosphate transporter n=5 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F699_CHRCT)

HSP 1 Score: 271 bits (693), Expect = 8.430e-85
Identity = 135/209 (64.59%), Postives = 166/209 (79.43%), Query Frame = 1
Query:   10 MNQDIHSSVKQSEYVSAIHDNAEKFDPRAEEAFKYVQVFTAICDSFSHGANDVANAMGPFSGIYLVYTTGVVSKEGDLGSNSFWILGLGGLGIVAGLAIYGYKIIAAIGVKIAKITPSRGFAIELGSAMMVIIGSRLEIPLSTTHCQVGATTGVALLEGTGGVNKAVLAKTVFGWIITIVVCALSCSVLFAQGAYAPYVYDTIDLPASV 636
            MN DIH+S+++ E V A+HDNAEKFDP AE  F+Y+QVFTAICDSF+HGANDVANAMGPF  IY++Y TG VSK+ D+G +++WIL LGG GI  GL +YGYKI+ AIGVK+A ITPSRGF+IELG+A+++IIGS L +PLSTTHCQVGATTGVALLEG  G+NK VL KT  GW+IT++V   S  +L AQG  AP +    D P S+
Sbjct:  342 MNVDIHASIEEDEKVQALHDNAEKFDPMAEAVFRYIQVFTAICDSFAHGANDVANAMGPFMAIYVIYDTGKVSKKADVGDDAYWILALGGAGIGIGLLLYGYKIMRAIGVKLAVITPSRGFSIELGAAIVIIIGSYLGLPLSTTHCQVGATTGVALLEGAKGINKWVLGKTCVGWVITLIVVGFSTGLLMAQGINAP-ITGNPDEPGSI 549          
BLAST of mRNA_L-elsbetiae_contig5423.13660.1 vs. uniprot
Match: A0A7S4BSB8_CHRCT (Phosphate transporter n=7 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BSB8_CHRCT)

HSP 1 Score: 263 bits (673), Expect = 2.310e-81
Identity = 130/209 (62.20%), Postives = 164/209 (78.47%), Query Frame = 1
Query:   10 MNQDIHSSVKQSEYVSAIHDNAEKFDPRAEEAFKYVQVFTAICDSFSHGANDVANAMGPFSGIYLVYTTGVVSKEGDLGSNSFWILGLGGLGIVAGLAIYGYKIIAAIGVKIAKITPSRGFAIELGSAMMVIIGSRLEIPLSTTHCQVGATTGVALLEGTGGVNKAVLAKTVFGWIITIVVCALSCSVLFAQGAYAPYVYDTIDLPASV 636
            +N D+H ++++   V A+HDNAEKFDP AE  F+Y+QVFTAICDSF+HGANDVANAMGPF  IY++Y TG VSK+ D+G +++WIL LGG+GI  GL +YGY I+ AIGVK+A ITPSRGF+IELG+A+++IIGS L +PLSTTHCQVGATTGVALLEG  G+NK VL KT  GW+IT++V   S  +L AQG  AP +    D P S+
Sbjct:  388 INVDVHKAIQEDVEVQALHDNAEKFDPMAEAVFRYIQVFTAICDSFAHGANDVANAMGPFMAIYVIYDTGKVSKKADVGDDAYWILALGGVGIGIGLLLYGYNIMRAIGVKLAVITPSRGFSIELGAAIVIIIGSYLGLPLSTTHCQVGATTGVALLEGAKGINKWVLLKTAVGWVITLIVVGFSTGLLVAQGINAP-ITGNPDEPGSI 595          
BLAST of mRNA_L-elsbetiae_contig5423.13660.1 vs. uniprot
Match: A0A7S3YL38_9EUKA (Phosphate transporter n=3 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YL38_9EUKA)

HSP 1 Score: 255 bits (652), Expect = 6.440e-79
Identity = 123/199 (61.81%), Postives = 155/199 (77.89%), Query Frame = 1
Query:    4 NQMNQDIHSSVKQSEYVSAIHDNAEKFDPRAEEAFKYVQVFTAICDSFSHGANDVANAMGPFSGIYLVYTTGVVSKEGDLGSNSFWILGLGGLGIVAGLAIYGYKIIAAIGVKIAKITPSRGFAIELGSAMMVIIGSRLEIPLSTTHCQVGATTGVALLEGTGGVNKAVLAKTVFGWIITIVVCALSCSVLFAQGAYAP 600
            N +N+D+H   +  +   +IHDNAE FDPRAEE FKY+QVFTA+CD+F+HGANDVANAMGPF+  Y+++  G VSK+ +LG++++WIL +GGLGIV GLA YGY I+ AIG+K+AKITPSRG  IELGSA ++I GSRLE+PLSTTHCQVGAT GVA LEG+ G+N  +  KTV GW+IT+ V     SV  AQ  YAP
Sbjct:  367 NGVNKDLHEITEIDDRTKSIHDNAEVFDPRAEEVFKYLQVFTAMCDAFAHGANDVANAMGPFAACYMIWREGEVSKKAELGADAYWILAIGGLGIVVGLATYGYHIVRAIGIKLAKITPSRGTCIELGSAAVIITGSRLELPLSTTHCQVGATMGVAALEGSAGINWWIFGKTVVGWVITLAVVGAMASVFMAQAIYAP 565          
BLAST of mRNA_L-elsbetiae_contig5423.13660.1 vs. uniprot
Match: G9E5G8_9PHYC (Phosphate transporter (Fragment) n=1 Tax=Ostreococcus lucimarinus virus OlV4 TaxID=754063 RepID=G9E5G8_9PHYC)

HSP 1 Score: 244 bits (624), Expect = 4.860e-78
Identity = 117/185 (63.24%), Postives = 150/185 (81.08%), Query Frame = 1
Query:   52 VSAIHDNAEKFDPRAEEAFKYVQVFTAICDSFSHGANDVANAMGPFSGIYLVYTTGVVSKEGDLGSNSFWILGLGGLGIVAGLAIYGYKIIAAIGVKIAKITPSRGFAIELGSAMMVIIGSRLEIPLSTTHCQVGATTGVALLEGTGGVNKAVLAKTVFGWIITIVVCALSCSVLFAQGAYAPYV 606
            V AIHDNAE+FD R E + +Y+Q+ TA CDSF+HGANDVAN++GPF+ IY +Y +G VSK  D+G++++WIL LG  GIVAGL++YGYKI+ A+G K+AK+TPSRG  IELG+A ++I+GSRL  PLSTTHCQVGAT GVAL EGTGGVN  +L KT+ GW++T+VV   + + LFAQGAYAP V
Sbjct:   97 VQAIHDNAEQFDARTEYSMRYLQILTACCDSFAHGANDVANSIGPFAAIYAIYKSGKVSKNADMGNDAYWILSLGATGIVAGLSLYGYKILNALGTKMAKLTPSRGICIELGAAAVIILGSRLGWPLSTTHCQVGATVGVALFEGTGGVNWKLLYKTIAGWLLTLVVVGSTTAFLFAQGAYAPMV 281          
BLAST of mRNA_L-elsbetiae_contig5423.13660.1 vs. uniprot
Match: A0A7S0QA31_9EUKA (Phosphate transporter n=3 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0QA31_9EUKA)

HSP 1 Score: 251 bits (641), Expect = 7.370e-78
Identity = 121/194 (62.37%), Postives = 154/194 (79.38%), Query Frame = 1
Query:   19 DIHSSVKQSEYVSAIHDNAEKFDPRAEEAFKYVQVFTAICDSFSHGANDVANAMGPFSGIYLVYTTGVVSKEGDLGSNSFWILGLGGLGIVAGLAIYGYKIIAAIGVKIAKITPSRGFAIELGSAMMVIIGSRLEIPLSTTHCQVGATTGVALLEGTGGVNKAVLAKTVFGWIITIVVCALSCSVLFAQGAYAP 600
            D H+S++ +  V  +H  AE FDP+AE  F+Y+Q+FTA CDSF+HGANDVAN++GPF+ IY ++ TG VS + D+G   +WIL LGGLGI  GL +YG KI+AA+GVKIAKITP+RGFAIELG+A+++IIGSRL  PLSTTHCQVGATTGVALLEG GGVNK +L KT  GW+IT+VV   + ++LFA G + P
Sbjct:  314 DPHASIQDNSVVGDMHAQAEVFDPKAEAVFRYLQIFTACCDSFAHGANDVANSIGPFAAIYAIHATGEVSSKSDMGVAGYWILALGGLGIATGLLLYGXKIMAALGVKIAKITPARGFAIELGAALIIIIGSRLGWPLSTTHCQVGATTGVALLEGKGGVNKYILVKTAVGWVITLVVVGCTAALLFAWGIHTP 507          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5423.13660.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JNE7_9PHAE1.750e-12589.57Phosphate transporter n=1 Tax=Ectocarpus sp. CCAP ... [more]
D7G0K9_ECTSI1.800e-12587.68Phosphate transporter n=2 Tax=Ectocarpus siliculos... [more]
A0A6H5JNL8_9PHAE3.600e-12488.15Phosphate transporter n=1 Tax=Ectocarpus sp. CCAP ... [more]
D7FWT9_ECTSI5.630e-11481.04Phosphate transporter n=1 Tax=Ectocarpus siliculos... [more]
D7FZJ7_ECTSI7.650e-10172.25Phosphate transporter n=1 Tax=Ectocarpus siliculos... [more]
A0A7S4F699_CHRCT8.430e-8564.59Phosphate transporter n=5 Tax=Chrysotila carterae ... [more]
A0A7S4BSB8_CHRCT2.310e-8162.20Phosphate transporter n=7 Tax=Chrysotila carterae ... [more]
A0A7S3YL38_9EUKA6.440e-7961.81Phosphate transporter n=3 Tax=Lotharella globosa T... [more]
G9E5G8_9PHYC4.860e-7863.24Phosphate transporter (Fragment) n=1 Tax=Ostreococ... [more]
A0A7S0QA31_9EUKA7.370e-7862.37Phosphate transporter n=3 Tax=Coccolithus braarudi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5423contigL-elsbetiae_contig5423:4904..7254 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score378.6
Seed ortholog evalue1.9e-102
Seed eggNOG ortholog2880.D7G0K8
Preferred namePHO89
KEGG koko:K01280,ko:K03306,ko:K14640
KEGG TC2.A.20,2.A.20.2
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005215,GO:0005315,GO:0005436,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006814,GO:0006817,GO:0006820,GO:0008150,GO:0008324,GO:0012505,GO:0015075,GO:0015077,GO:0015081,GO:0015291,GO:0015293,GO:0015294,GO:0015318,GO:0015319,GO:0015370,GO:0015672,GO:0015698,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0031226,GO:0034220,GO:0035435,GO:0035725,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098655,GO:0098656,GO:0098660,GO:0098661,GO:0098662
EggNOG free text desc.inorganic phosphate transmembrane transporter activity
EggNOG OGsCOG0306@1,KOG2493@2759
EC3.4.14.10
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002,ko02000,ko03110
Exons3
Model size645
Cds size645
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5423.13660.1prot_L-elsbetiae_contig5423.13660.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5423 4904..7254 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816567.4625647-CDS-L-elsbetiae_contig5423:4903..52141622816567.4625647-CDS-L-elsbetiae_contig5423:4903..5214Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5423 4904..5214 +
1691683652.6176167-CDS-L-elsbetiae_contig5423:4903..52141691683652.6176167-CDS-L-elsbetiae_contig5423:4903..5214Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5423 4904..5214 +
1622816567.4732778-CDS-L-elsbetiae_contig5423:5925..60641622816567.4732778-CDS-L-elsbetiae_contig5423:5925..6064Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5423 5926..6064 +
1691683652.628565-CDS-L-elsbetiae_contig5423:5925..60641691683652.628565-CDS-L-elsbetiae_contig5423:5925..6064Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5423 5926..6064 +
1622816567.4852722-CDS-L-elsbetiae_contig5423:7059..72541622816567.4852722-CDS-L-elsbetiae_contig5423:7059..7254Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5423 7060..7254 +
1691683652.6372566-CDS-L-elsbetiae_contig5423:7059..72541691683652.6372566-CDS-L-elsbetiae_contig5423:7059..7254Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5423 7060..7254 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5423.13660.1

>prot_L-elsbetiae_contig5423.13660.1 ID=prot_L-elsbetiae_contig5423.13660.1|Name=mRNA_L-elsbetiae_contig5423.13660.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=215bp
MNQMNQDIHSSVKQSEYVSAIHDNAEKFDPRAEEAFKYVQVFTAICDSFS
HGANDVANAMGPFSGIYLVYTTGVVSKEGDLGSNSFWILGLGGLGIVAGL
AIYGYKIIAAIGVKIAKITPSRGFAIELGSAMMVIIGSRLEIPLSTTHCQ
VGATTGVALLEGTGGVNKAVLAKTVFGWIITIVVCALSCSVLFAQGAYAP
YVYDTIDLPASVDV*
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mRNA from alignment at L-elsbetiae_contig5423:4904..7254+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5423.13660.1 ID=mRNA_L-elsbetiae_contig5423.13660.1|Name=mRNA_L-elsbetiae_contig5423.13660.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2351bp|location=Sequence derived from alignment at L-elsbetiae_contig5423:4904..7254+ (Laminarionema elsbetiae ELsaHSoW15)
ATGAACCAGATGAACCAGGACATCCACTCGAGCGTCAAGCAATCGGAGTA CGTGAGCGCCATCCACGACAACGCCGAGAAGTTCGACCCCCGCGCTGAGG AGGCCTTCAAGTACGTGCAGGTGTTCACAGCCATCTGCGACTCCTTCTCG CACGGCGCCAACGACGTGGCCAACGCCATGGGACCGTTCTCGGGGATCTA CCTGGTGTACACAACGGGCGTTGTTTCCAAGGAGGGTGACCTCGGCAGCA ACTCCTTCTGGATCCTCGGGCTTGGCGGCCTCGGAATTGTGGCGGGTCTC GCCATCTACGGGTGAGTTGAACAAACTGCGCTGTGAGGAGGATACATATT GACGTATAGATTGCCTAGGGTCTATAGGTTACCCTCGGCTGCTTCTTTAG TTTTTGTTTTAATGTATTGGTTGTGGATGTGTGCACTCGCTACATACATA GTGTATGGCTCGTTTCCAGAGGGAGATACATGCAGACGGGGAGCGCAAAA TAGCATGTGTATGTGCTGTGCATACCGCTCTCTCTTTCTCGCCAGAGAGA GGCACATGACACAGACTCTCTCTCCTCTACGGATGGGTCGAACAAACTGC GCTTTTACGCACCATACACTTCATGCAGAGAAAACTGGTCGAGGATGGTG ATGCAAAAACCAAGAAAGCACGACAATCAGCAAGACCGTACACTTTTTAA GGAGAGAATCGGTGCTGTTAAATAAGTAGGGGTATCCATAAAAATCGATT GATGCGTTGTCTGGGTTTTCAGTGTGGTATTCTCGCACGCGTCGCGGGGG ATTGTAACATGAAGGTCGCCCTAGATGTTAGTCCAGCGTTGGCTTCGCTT TTGGGTTTTTGTTTTGCGAAATCCAAGTCATCGCCACCTTGCCCCAACAT TTCCGAAAGCATAAGTGTGTGGTCCACCTCAACCTGTTGCCGCGAATGAA GCAAATGTGCTCACCCCTCCCCGCCGCTGGCGTGGAAACAACTTGACGAT GATCTATGAACATACAATCCAGGTACAAGATCATCGCAGCCATCGGCGTG AAGATCGCGAAGATCACCCCGTCTCGCGGTTTCGCGATCGAGCTCGGATC GGCCATGATGGTCATCATCGGCTCGCGGCTCGAGATCCCCCTCTCCACCA CTCACTGCCAGGTGAGCTAAACTTCATGTTGCTACTTGCCAAGCTTTTGG AGAACGAATCGAGTCTGACTGATAGCAGCCGTCGGCAGAGGAACTTAATG GTACTTCTCATGGTCACTTGGGGGTTTTGGGGGCTGGTTCAAGTGTAAAA TATAAGGTCGACCCACGGAACAAGCATCCCCCAAGGGGGTGCCGTGGATG AGAGGAGGTTGATGAGAAGAGGTGTGGGAAAGCCCAGCCTTCTTCACGAC CCTCAAGCCCTGGGAACCGTTTTGAGAACTGAGAATTCAGAACTCAGAAC TGAGTACTTAGCACAGGGACCTACGCAACTGGTACGGCACTGTACAACAG TGAACCGAGGCCGCCTCCGGTGTCATGAAAAGGGGAAGTAGGGGATAGAG GAGAGAAAGAGGTAAGGTCCGATCGTGGAGGGGGAAAAGCTTGAGCTTTG AAAGGTGGTCACCCAGAAGGGTTCCTTTCCCGCCCCAAACTCGGAGCAGC ACTAGGGCTCGCTTTGCGGGCATTAGTTCTGAAGCCAGCACGCCAGGCTG AGAAGGGGCCGATGGCGCCGCGCCGGCTCTGCTTCATGTGCAGCGAGGTT CTGACTAGCGCGGAGACGAGACTAGCCCAGCAAACCAAGAGGCAGTTTGT TTCTGGCCCTGAGTTCTGGAAAAAAAAAGCTATTATTTAAAAGGGGCTTA GCGGAGGGGGAAAGTAAGGATAGGAATAACAATAACATTTTCGTGGCAGG AGGAACCCAATGTTGAGGACTCGTCGCTAGCATCATTCCAAACATTGCAT GAACGTCAAGTCCAGTACAGGCCCTCATCGCGTGGGTTTTCTCTGATCGC CGCAAGAGGTGTGAGCTCGCGTTTTAGGTACACAACCCATCCTCCGAAAA GCTCCATTTTGACGATTTTTCTCTCTCCCTGCCTCTCTGCCTGGATAAAT CTGTGTGCGCACATACATACATATGTGTTTGTCCCGAAATCCAATCGAAA CACCAGGTCGGAGCTACCACCGGTGTGGCCCTCCTGGAGGGGACTGGCGG CGTCAACAAGGCCGTGCTCGCCAAGACCGTGTTCGGGTGGATCATCACCA TCGTGGTGTGCGCGCTCAGCTGCTCGGTGCTCTTCGCGCAGGGAGCTTAC GCTCCTTACGTGTACGACACCATCGACCTCCCGGCTTCGGTCGACGTATA G
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Coding sequence (CDS) from alignment at L-elsbetiae_contig5423:4904..7254+

>mRNA_L-elsbetiae_contig5423.13660.1 ID=mRNA_L-elsbetiae_contig5423.13660.1|Name=mRNA_L-elsbetiae_contig5423.13660.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1290bp|location=Sequence derived from alignment at L-elsbetiae_contig5423:4904..7254+ (Laminarionema elsbetiae ELsaHSoW15)
ATGAACCAGATGAACCAGGACATCCACTCGAGCGTCAAGCAATCGGAGTA
CGTGAGCGCCATCCACGACAACGCCGAGAAGTTCGACCCCCGCGCTGAGG
AGGCCTTCAAGTACGTGCAGGTGTTCACAGCCATCTGCGACTCCTTCTCG
CACGGCGCCAACGACGTGGCCAACGCCATGGGACCGTTCTCGGGGATCTA
CCTGGTGTACACAACGGGCGTTGTTTCCAAGGAGGGTGACCTCGGCAGCA
ACTCCTTCTGGATCCTCGGGCTTGGCGGCCTCGGAATTGTGGCGGGTCTC
GCCATCTACGGATGAACCAGATGAACCAGGACATCCACTCGAGCGTCAAG
CAATCGGAGTACGTGAGCGCCATCCACGACAACGCCGAGAAGTTCGACCC
CCGCGCTGAGGAGGCCTTCAAGTACGTGCAGGTGTTCACAGCCATCTGCG
ACTCCTTCTCGCACGGCGCCAACGACGTGGCCAACGCCATGGGACCGTTC
TCGGGGATCTACCTGGTGTACACAACGGGCGTTGTTTCCAAGGAGGGTGA
CCTCGGCAGCAACTCCTTCTGGATCCTCGGGCTTGGCGGCCTCGGAATTG
TGGCGGGTCTCGCCATCTACGGGTACAAGATCATCGCAGCCATCGGCGTG
AAGATCGCGAAGATCACCCCGTCTCGCGGTTTCGCGATCGAGCTCGGATC
GGCCATGATGGTCATCATCGGCTCGCGGCTCGAGATCCCCCTCTCCACCA
CTCACTGCCAGGTACAAGATCATCGCAGCCATCGGCGTGAAGATCGCGAA
GATCACCCCGTCTCGCGGTTTCGCGATCGAGCTCGGATCGGCCATGATGG
TCATCATCGGCTCGCGGCTCGAGATCCCCCTCTCCACCACTCACTGCCAG
GTCGGAGCTACCACCGGTGTGGCCCTCCTGGAGGGGACTGGCGGCGTCAA
CAAGGCCGTGCTCGCCAAGACCGTGTTCGGGTGGATCATCACCATCGTGG
TGTGCGCGCTCAGCTGCTCGGTGCTCTTCGCGCAGGGAGCTTACGCTCCT
TACGTGTACGACACCATCGACCTCCCGGCTTCGGTCGACGTATAGGTCGG
AGCTACCACCGGTGTGGCCCTCCTGGAGGGGACTGGCGGCGTCAACAAGG
CCGTGCTCGCCAAGACCGTGTTCGGGTGGATCATCACCATCGTGGTGTGC
GCGCTCAGCTGCTCGGTGCTCTTCGCGCAGGGAGCTTACGCTCCTTACGT
GTACGACACCATCGACCTCCCGGCTTCGGTCGACGTATAG
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