mRNA_L-elsbetiae_contig542.13653.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig542.13653.1
Unique NamemRNA_L-elsbetiae_contig542.13653.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig542.13653.1 vs. uniprot
Match: A0A6H5KB35_9PHAE (Nudix hydrolase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB35_9PHAE)

HSP 1 Score: 167 bits (423), Expect = 1.220e-51
Identity = 81/92 (88.04%), Postives = 88/92 (95.65%), Query Frame = 1 
Query:    1 RLVAGCLPVTPDGRLVLIGSVKRSDWILPKGGWETDETAAEAAVREAYEEAGVKGRVIANLGSHEIVSSRGNKSRAAMFALRVTEVLDDWPE 276
            RLVAGCLPVTPDGRLVLIGS+KR+DWILPKGGW+TDETAAEAAVREAYEEAGVKG V A+LG HEIVSSRGNKSRAAMFAL V++VLD+WPE
Sbjct:   18 RLVAGCLPVTPDGRLVLIGSLKRTDWILPKGGWDTDETAAEAAVREAYEEAGVKGLVTADLGPHEIVSSRGNKSRAAMFALLVSDVLDEWPE 109
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BLAST of mRNA_L-elsbetiae_contig542.13653.1 vs. uniprot
Match: D8LPS9_ECTSI (Nudix hydrolase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPS9_ECTSI)

HSP 1 Score: 166 bits (421), Expect = 3.490e-51
Identity = 81/92 (88.04%), Postives = 87/92 (94.57%), Query Frame = 1 
Query:    1 RLVAGCLPVTPDGRLVLIGSVKRSDWILPKGGWETDETAAEAAVREAYEEAGVKGRVIANLGSHEIVSSRGNKSRAAMFALRVTEVLDDWPE 276
            RLVAGCLPVTPDGRLVLIGSVK +DWILPKGGW+TDETAAEAAVREAYEEAGVKG V A+LG HEIVSSRGNKSRAAMFAL V++VLD+WPE
Sbjct:   18 RLVAGCLPVTPDGRLVLIGSVKHTDWILPKGGWDTDETAAEAAVREAYEEAGVKGLVTADLGPHEIVSSRGNKSRAAMFALLVSDVLDEWPE 109
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BLAST of mRNA_L-elsbetiae_contig542.13653.1 vs. uniprot
Match: A0A4D9CRC2_9STRA (Nudix hydrolase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CRC2_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 1.430e-22
Identity = 49/93 (52.69%), Postives = 60/93 (64.52%), Query Frame = 1 
Query:    1 RLVAGCLPVTPDGRLVLIGSVKRSDWILPKGGWETDETAAEAAVREAYEEAGVKGRVIANLGSHEIV-SSRGNKSRAAMFALRVTEVLDDWPE 276
            RL+ GC+P+T DG +VLI S +  DWILPKGGWE DETA EAA RE YEE GV G V A   S     + RG +    +F + V+E+L  WPE
Sbjct:   25 RLITGCIPLTSDGNVVLISS-RTGDWILPKGGWERDETAREAAARETYEEGGVHGLVHAEPFSETSYRNKRGEECHLLLFVMEVSELLPQWPE 116
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BLAST of mRNA_L-elsbetiae_contig542.13653.1 vs. uniprot
Match: A0A1X2HDZ4_SYNRA (NUDIX hydrolase domain-like protein n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HDZ4_SYNRA)

HSP 1 Score: 92.0 bits (227), Expect = 1.330e-21
Identity = 47/95 (49.47%), Postives = 64/95 (67.37%), Query Frame = 1 
Query:    1 RLVAGCLPVTP-DGRLVLIGSVKRSD-WILPKGGWETDETAAEAAVREAYEEAGVKGRVIANLGSHEIVSSRGN-KSRAAMFALRVTEVLDDWPE 276
            R VAGCLP+ P   R++LI S K  + W+ PKGGWE DET  EAA RE YEEAGV+GR+   +G++   + +GN K+R  ++ L + E+L  WPE
Sbjct:   23 RQVAGCLPIDPLTRRVMLISSSKHPNTWVFPKGGWENDETREEAAQRETYEEAGVRGRITRYVGNYYEYTKKGNAKTRFWVYELEIQEILKKWPE 117
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BLAST of mRNA_L-elsbetiae_contig542.13653.1 vs. uniprot
Match: A0A7S1U8G6_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8G6_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 2.970e-21
Identity = 51/93 (54.84%), Postives = 61/93 (65.59%), Query Frame = 1 
Query:    1 RLVAGCLPVTPDGRLVLIGSVKRSDWILPKGGWETDETAAEAAVREAYEEAGVKGRVIANLGSHEI-VSSRGNKSRAAMFALRVTEVLDDWPE 276
            RL AG +PV   G +VLI S KR +WILPKGGWE+DET   AA RE YEEAGV+G V        + ++SRG   R   + L VTEVLD+WPE
Sbjct:  108 RLCAGVVPVL-KGNVVLIKSQKRKEWILPKGGWESDETIEAAAARECYEEAGVRGTVNPERYLETVHMNSRGVSCRTRFYLLDVTEVLDEWPE 199
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BLAST of mRNA_L-elsbetiae_contig542.13653.1 vs. uniprot
Match: A0A1Y1ZLD6_9FUNG (Nudix hydrolase domain-containing protein (Fragment) n=1 Tax=Neocallimastix californiae TaxID=1754190 RepID=A0A1Y1ZLD6_9FUNG)

HSP 1 Score: 89.0 bits (219), Expect = 1.190e-20
Identity = 43/98 (43.88%), Postives = 64/98 (65.31%), Query Frame = 1 
Query:    1 RLVAGCLPVTPD-GRLVLIGSVKRSD-WILPKGGWETDETAAEAAVREAYEEAGVKGRVIANLGSHE----IVSSRGNKSRAAMFALRVTEVLDDWPE 276
            R VAGC+P+ P  G+++LI   K+ + WI PKGGWE DET   AA+RE +EEAGVKG +++ +G  +       +   K+   ++ ++VTE+ DDWPE
Sbjct:    1 RKVAGCVPIDPKTGKVLLISCRKKPNCWIFPKGGWENDETVTSAAMRETWEEAGVKGEIVSMIGKFKQYKKFKKNTCKKNPILLYEMKVTEIADDWPE 98
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BLAST of mRNA_L-elsbetiae_contig542.13653.1 vs. uniprot
Match: A0A197JWX4_9FUNG (Nudix hydrolase domain-containing protein n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JWX4_9FUNG)

HSP 1 Score: 87.4 bits (215), Expect = 5.880e-20
Identity = 44/97 (45.36%), Postives = 60/97 (61.86%), Query Frame = 1 
Query:    1 RLVAGCLPVTPDGRLVLI--GSVKRSDWILPKGGWETDETAAEAAVREAYEEAGVKGRVIANLGSHEIVSSRGN---KSRAAMFALRVTEVLDDWPE 276
            RLVAGC+P+   GR VL+   S    +W+LPKGGWE DET  EAA RE +EEAG  GR++A+LG +E   ++     +S    F + V  + + WPE
Sbjct:   20 RLVAGCVPIDKHGRRVLLVASSKNEGEWVLPKGGWENDETQEEAAARETWEEAGAIGRIVAHLGEYEHKYNKKTGHAESIFIFFEMEVERIEEKWPE 116
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BLAST of mRNA_L-elsbetiae_contig542.13653.1 vs. uniprot
Match: F2UHF6_SALR5 (Nudix hydrolase domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UHF6_SALR5)

HSP 1 Score: 89.7 bits (221), Expect = 7.540e-20
Identity = 50/95 (52.63%), Postives = 62/95 (65.26%), Query Frame = 1 
Query:    1 RLVAGCLPV---TPDGRLVLIGSVKRSDWILPKGGWETDETAAEAAVREAYEEAGVKGRVIANLGSHEIVSSRGNKSRAAMFALRVTEVLDDWPE 276
            RLVAGC+P    T    ++LI + K+  WI+PKGGWE DET  EAA REAYEEAGV G V A L   E +   G + R   FAL+V+ +LD+WPE
Sbjct:   39 RLVAGCVPYRTHTGTPEVMLITNHKKDKWIIPKGGWERDETETEAAAREAYEEAGVLGAVGACLVDCEYMGKSGPQ-RHRYFALQVSSMLDEWPE 132
[Close]
BLAST of mRNA_L-elsbetiae_contig542.13653.1 vs. uniprot
Match: A0A8K0M623_9HYPO (NUDIX hydrolase domain-like protein n=2 Tax=Ilyonectria TaxID=1079112 RepID=A0A8K0M623_9HYPO)

HSP 1 Score: 87.4 bits (215), Expect = 7.720e-20
Identity = 49/96 (51.04%), Postives = 61/96 (63.54%), Query Frame = 1 
Query:    1 RLVAGCLPVTPDGRLVL-IGSVKRSDWILPKGGWETDETAAEAAVREAYEEAGVKGRVIANLGSHEIV---SSRGNKSRAAMFALRVTEVLDDWPE 276
            RLVAG +P+TPD   VL I S +R  W+LPKGGWE+DET  EAA REA+EEAG+  ++  +LG  E      S  ++SR   F   VT   DDWPE
Sbjct:   31 RLVAGIVPLTPDQNYVLLIQSTRRKGWVLPKGGWESDETCQEAAEREAWEEAGIAIQINYDLGDIEEKRPQKSSKDRSRYHFFEGTVTNEYDDWPE 126
[Close]
BLAST of mRNA_L-elsbetiae_contig542.13653.1 vs. uniprot
Match: A0A0D2WK44_CAPO3 (Nudix hydrolase domain-containing protein n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WK44_CAPO3)

HSP 1 Score: 86.7 bits (213), Expect = 8.250e-20
Identity = 45/97 (46.39%), Postives = 61/97 (62.89%), Query Frame = 1 
Query:    1 RLVAGCLPVTPDG----RLVLIGSVKRSDWILPKGGWETDETAAEAAVREAYEEAGVKGRVIANLGSHEIVSSRGNKSRAA-MFALRVTEVLDDWPE 276
            R VAGC+    D      ++L+ S  + +WILPKGGWE+DE+  E+A REA EEAG+ GR+  +LGS ++ S  GN +     F L V +VLD WPE
Sbjct:   24 RQVAGCVITRRDTGGQREILLVTSRAKQEWILPKGGWESDESIEESARREAIEEAGIVGRITRSLGSVQVASKNGNSTSCIHWFELAVDQVLDQWPE 120
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig542.13653.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KB35_9PHAE1.220e-5188.04Nudix hydrolase domain-containing protein n=1 Tax=... [more]
D8LPS9_ECTSI3.490e-5188.04Nudix hydrolase domain-containing protein n=1 Tax=... [more]
A0A4D9CRC2_9STRA1.430e-2252.69Nudix hydrolase domain-containing protein n=2 Tax=... [more]
A0A1X2HDZ4_SYNRA1.330e-2149.47NUDIX hydrolase domain-like protein n=1 Tax=Syncep... [more]
A0A7S1U8G6_9STRA2.970e-2154.84Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A1Y1ZLD6_9FUNG1.190e-2043.88Nudix hydrolase domain-containing protein (Fragmen... [more]
A0A197JWX4_9FUNG5.880e-2045.36Nudix hydrolase domain-containing protein n=1 Tax=... [more]
F2UHF6_SALR57.540e-2052.63Nudix hydrolase domain-containing protein n=1 Tax=... [more]
A0A8K0M623_9HYPO7.720e-2051.04NUDIX hydrolase domain-like protein n=2 Tax=Ilyone... [more]
A0A0D2WK44_CAPO38.250e-2046.39Nudix hydrolase domain-containing protein n=2 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig542contigL-elsbetiae_contig542:31545..32720 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score167.2
Seed ortholog evalue3.7e-39
Seed eggNOG ortholog2880.D8LPS9
Preferred nameDDP1
KEGG koko:K07766
Hectar predicted targeting categoryother localisation
GOsGO:0000298,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0004551,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005829,GO:0005975,GO:0006066,GO:0006082,GO:0006139,GO:0006163,GO:0006195,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006797,GO:0006798,GO:0006807,GO:0008150,GO:0008152,GO:0008486,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009125,GO:0009126,GO:0009128,GO:0009150,GO:0009154,GO:0009158,GO:0009161,GO:0009166,GO:0009167,GO:0009169,GO:0009259,GO:0009261,GO:0009987,GO:0015959,GO:0015961,GO:0016070,GO:0016311,GO:0016462,GO:0016787,GO:0016788,GO:0016817,GO:0016818,GO:0016891,GO:0016893,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019751,GO:0034404,GO:0034431,GO:0034432,GO:0034641,GO:0034654,GO:0034655,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043647,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046164,GO:0046174,GO:0046434,GO:0046483,GO:0046700,GO:0046838,GO:0046855,GO:0050072,GO:0055086,GO:0071543,GO:0071545,GO:0071704,GO:0072521,GO:0072523,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901615,GO:1901616,GO:1901906,GO:1901907,GO:1901908,GO:1901909,GO:1901910,GO:1901911,GO:1990174
EggNOG free text desc.diphosphoinositol-polyphosphate diphosphatase activity
EggNOG OGsCOG0494@1,KOG2839@2759
EC3.6.1.52
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Ec32 ortholog descriptionNUDIX hydrolase domain-like
Ec32 orthologEc-18_002330.1
Exons2
Model size276
Cds size276
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816567.0937672-CDS-L-elsbetiae_contig542:31544..316641622816567.0937672-CDS-L-elsbetiae_contig542:31544..31664Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig542 31545..31664 -
1691683652.417363-CDS-L-elsbetiae_contig542:31544..316641691683652.417363-CDS-L-elsbetiae_contig542:31544..31664Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig542 31545..31664 -
1622816567.103928-CDS-L-elsbetiae_contig542:32564..327201622816567.103928-CDS-L-elsbetiae_contig542:32564..32720Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig542 32565..32720 -
1691683652.4320755-CDS-L-elsbetiae_contig542:32564..327201691683652.4320755-CDS-L-elsbetiae_contig542:32564..32720Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig542 32565..32720 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig542.13653.1prot_L-elsbetiae_contig542.13653.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig542 31545..32720 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig542.13653.1

>prot_L-elsbetiae_contig542.13653.1 ID=prot_L-elsbetiae_contig542.13653.1|Name=mRNA_L-elsbetiae_contig542.13653.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=92bp
RLVAGCLPVTPDGRLVLIGSVKRSDWILPKGGWETDETAAEAAVREAYEE
AGVKGRVIANLGSHEIVSSRGNKSRAAMFALRVTEVLDDWPE
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mRNA from alignment at L-elsbetiae_contig542:31545..32720-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig542.13653.1 ID=mRNA_L-elsbetiae_contig542.13653.1|Name=mRNA_L-elsbetiae_contig542.13653.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1176bp|location=Sequence derived from alignment at L-elsbetiae_contig542:31545..32720- (Laminarionema elsbetiae ELsaHSoW15)
AGGCTCGTGGCCGGTTGCCTGCCGGTCACGCCGGACGGGCGGCTGGTGCT
GATCGGCAGCGTCAAGCGGTCGGACTGGATACTGCCCAAGGGCGGGTGGG
AGACAGACGAGACGGCGGCGGAGGCGGCGGTGCGAGAGGCGTACGAAGAG
GCAGGGGTGAGGGGCGAGAATGGTCGAGAGAAGCAGCAGGTCAACTACTG
CTGTTGTTGTCGTTAAGGGAAAAGAAAAGAAAACTGTGTTGGTGGATGTA
TGCTATGTACATGTCCTATCTAGGAGACCTTCCTCGAGCGGGAAGAGAGG
GGGGAAAGAAGGGATGTTGAAGACGAAGGGATGGCAAGCATAGTTACCGT
AAATTAGCAACGCTGCGGTATCTGATCTACCGATACATTGCAGGCACCCC
AGGAGCGAAGAAGCCGTGTGGTTATTTGTACTTGCCATGCAAGGTTATTC
CGTCTTCTTGCAGTTGCAGCCTACAAGAGGGAACGGAGGTTGTCTAGAAC
TAAATACGGAGATCGCTGCAAATACATAAGTACACACATCCGTTGGAGAT
TCATGTTCGGAATTCAGCAGGGACGGCAGCAGCCGAAAGTTCCAAATTGG
GTATGTATGTACAATGATTCACCAGGTGTTGAGCAACCCATGCCGATTAC
TAAAAATGACGTCTTCATGTTTCGGCTCAAGCACGCGGGCACACCAAATA
CCTGGGGTTTAGGGCTAGGGTTACGTAGCGTTACCATGATGGGTGCCCAC
CCCGCGCGTCGGCCTACTGTCCCATGTTGCCGGACGGAAAATACCAAAGC
ATTCGTAGGCCATCATGGGGACTGCAGTTTCAGTAGTACTGTTAACAGTC
GACCGTATAAGTGCGCTTCGAACCAGGGCGGAGCTGGGTGATAGGATCCG
TCGCGAATTGAAACGGAGCCCCCTGATTTAGGCGCCGAGGTTATTTCGCC
TCATACATATGTACTCGATGCAACAGCCCGTTTGCCCCGCTCCACACCCC
CCGCCGCTCTCTTGTCTCCTTTTGCTTTCTCGGTTTCGGCCCTTTTCTCG
AGGAAGGTAAAGGGCCGGGTCATCGCGAACCTGGGCTCGCACGAGATAGT
CAGCAGCCGAGGCAACAAGAGCCGGGCGGCGATGTTCGCCTTGCGGGTGA
CGGAAGTGCTGGATGACTGGCCCGAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig542:31545..32720-

>mRNA_L-elsbetiae_contig542.13653.1 ID=mRNA_L-elsbetiae_contig542.13653.1|Name=mRNA_L-elsbetiae_contig542.13653.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=552bp|location=Sequence derived from alignment at L-elsbetiae_contig542:31545..32720- (Laminarionema elsbetiae ELsaHSoW15)
AGGCTCGTGGCCGGTTGCCTGCCGGTCACGCCGGACGGGCGGCTGGTGCT
GATCGGCAGCGTCAAGCGGTCGGACTGGATACTGCCCAAGGGCGGGTGGG
AGACAGACGAGACGGCGGCGGAGGCGGCGGTGCGAGAGGCGTACGAAGAG
GCAGGGAGGCTCGTGGCCGGTTGCCTGCCGGTCACGCCGGACGGGCGGCT
GGTGCTGATCGGCAGCGTCAAGCGGTCGGACTGGATACTGCCCAAGGGCG
GGTGGGAGACAGACGAGACGGCGGCGGAGGCGGCGGTGCGAGAGGCGTAC
GAAGAGGCAGGGGTAAAGGGCCGGGTCATCGCGAACCTGGGCTCGCACGA
GATAGTCAGCAGCCGAGGCAACAAGAGCCGGGCGGCGATGTTCGCCTTGC
GGGTGACGGAAGTGCTGGATGACTGGCCCGAGGTAAAGGGCCGGGTCATC
GCGAACCTGGGCTCGCACGAGATAGTCAGCAGCCGAGGCAACAAGAGCCG
GGCGGCGATGTTCGCCTTGCGGGTGACGGAAGTGCTGGATGACTGGCCCG
AG
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