mRNA_L-elsbetiae_contig542.13651.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig542.13651.1
Unique NamemRNA_L-elsbetiae_contig542.13651.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig542.13651.1 vs. uniprot
Match: D8LBB4_ECTSI (UBC core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBB4_ECTSI)

HSP 1 Score: 530 bits (1366), Expect = 5.310e-165
Identity = 294/389 (75.58%), Postives = 316/389 (81.23%), Query Frame = 1
Query:  190 QTDLGGMTCKLLVGLTEHGATGSTRTFAVALHDSDPEFDGELLEAVAKEEGGERLREM-VLESLSRALE---EDXXXXXXXXXXXXXXXXXXXXXHGGAGDPFEGVLETAEGVGADELALQYGDAMTELVHTQVEALSPGHYFDSRREGSILRQPRKVANEVMRNLPRTLPNPPHPNSAVFAVFEEDALNFSRFVISGPVGTPYENGLFVFDVFLPANYPTDPPLVQMVTTGQGTVKFNANLYPDGKVCLSVLGKDSGASAGSGDKWNPETSSLWQVFVSIQTMVLTKDPYYNEGGGRSNMRGRGTAETEEASAHENARVTLETIRHAAVANLRHPPKGCEELIRYHFRALRNRILLRCKKAVEQAPDERLKRATLRASAELRAEIDKL 1344
            + +LGGM C LLVGLT HG    TR FA ALH +D EFDG LLEAVA  EGG  L     L  L+RALE   ED      XXXXXXXXXX XXXX   +GDPFEGV E A     +EL  +YGDA+ +LVHTQVE+LSPGHYFDSRREGS L  PRKVA E MR LPR LPNPPHPNSAVFAV  EDALNFSRFVISGPV TPYE GLFVFDVFLP+NYP DPPLVQM+TTGQGTVKFN NLY DGKVCLS+LG  +GASA  GDKWNPETSSLWQVF SIQT VL KDPYYNEGGGRSNMRGRGTAETEEASAHENARV LETIRHAAVANLRHPPKGCE+LIR HF +LR R+L RC++AVE+AP+ERLKRATLRASAELRAE+DKL
Sbjct: 1366 KAELGGMACDLLVGLTAHGDAAPTRAFAAALHHADSEFDGRLLEAVAAGEGGAGLGGTPALARLTRALEAADEDRRKMEEXXXXXXXXXXEXXXXXXXSGDPFEGVPEVA--ADDEELVREYGDAIADLVHTQVESLSPGHYFDSRREGSTLTHPRKVATETMRKLPRMLPNPPHPNSAVFAVLGEDALNFSRFVISGPVDTPYEGGLFVFDVFLPSNYPADPPLVQMITTGQGTVKFNVNLYSDGKVCLSLLGSATGASASGGDKWNPETSSLWQVFASIQTQVLVKDPYYNEGGGRSNMRGRGTAETEEASAHENARVILETIRHAAVANLRHPPKGCEKLIRQHFHSLRKRVLARCRRAVEEAPNERLKRATLRASAELRAEMDKL 1752          
BLAST of mRNA_L-elsbetiae_contig542.13651.1 vs. uniprot
Match: A0A7S2WEL6_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WEL6_9STRA)

HSP 1 Score: 206 bits (525), Expect = 4.250e-53
Identity = 118/250 (47.20%), Postives = 151/250 (60.40%), Query Frame = 1
Query:  505 AEGVGADELALQYGDAMTELVHTQVEALSPGHYFDSRRE---GSILRQPRKVANEVMRNLPRTLPNPPHPNSAVFAVFEEDALNFSRFVISGPVGTPYENGLFVFDVFLPANYPTDPPLVQMVTTGQGTVKFNANLYPDGKVCLSVLGKDSGASAGSGDKWNPETSSLWQVFVSIQTMVLTKDPYYNEGGGRSNMRGRGTAETEEASAHENARVTLETIRHAAVANLRHPPKGCEELIRYHFRALRNRIL 1245
            AE   ADE   +Y +A ++ V  QV+    GHYF  RR    G+   Q R +  E MR +PR LP P HP+ A++   +E+A NF+R VI+GP+ TPY  GLFVFDVF P +YP +PPLVQ+VTTGQGT +FN NLY DGKVCLS+LG   G      +KW P  S+L QV +S+   +L  +PYYNE G  +    RGT E + AS   N  + L  +RHA + +LR P      LIR HF   R RIL
Sbjct:  412 AEAQEADE---RYAEACSDFVFDQVDGFQAGHYFSKRRAALGGAGGGQMRPLVRE-MRRMPRDLPEP-HPDGAIYVQVDENAANFARAVIAGPLNTPYYGGLFVFDVFFPPSYPNEPPLVQLVTTGQGTARFNPNLYADGKVCLSLLGTWHGQE---NEKWQPGVSTLAQVLLSVLGQILVSEPYYNEPGRDAQ---RGTREGDMASRLYNQEIRLAAVRHAMLDHLRRPDPELAPLIRQHFAGARRRIL 650          
BLAST of mRNA_L-elsbetiae_contig542.13651.1 vs. uniprot
Match: A0A1S3HBG2_LINUN (uncharacterized protein LOC106153808 isoform X1 n=3 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3HBG2_LINUN)

HSP 1 Score: 199 bits (506), Expect = 2.870e-49
Identity = 117/271 (43.17%), Postives = 164/271 (60.52%), Query Frame = 1
Query:  535 LQYGDAMTELVHTQVEALSPGHYFDSRREGSILRQPRKVANEVMRNLPRTLPNPPHPNSAVFAVFEEDALNFSRFVISGPVGTPYENGLFVFDVFLPANYPTDPPLVQMVTTGQGTVKFNANLYPDGKVCLSVLGKDSGASAGSGDKWNPETSSLWQVFVSIQTMVLTKDPYYNEGGGRSNMRGRGTAETEEASAHENARVTLETIRHAAVANLRHPPKGCEELIRYHFRALRNRILLRCKKAVEQAPDERLKRATLRASAELRAEIDKLS 1347
            L+YG A  +  H+   +    H   S++  +++++ +++  ++          P H N+A+FA  +E+ ++  R VI+GP  TPY  G FVFD++ P NYP  PPLV++VTTG GTV+FN NLY DGKVCLS+LG   G  A   +KWNP+TSSL+QV VSIQ M+L +DP +NE G       RGT E E  SA  N+++ L TIRHA +  LR PP G E +IR HF   R  IL +C   +E + +    R  L A  ELR E++KL+
Sbjct: 1242 LKYGTADIQESHSFRTSAGQSHDPRSQKWKALMKEIKQLQKDL----------PVHLNAAIFARQDENQMDIVRAVITGPADTPYSRGCFVFDIYFPTNYPHIPPLVKLVTTGNGTVRFNPNLYADGKVCLSLLGTWHGGDAS--EKWNPKTSSLYQVLVSIQGMILIEDPMFNEPGYDGI---RGTEEGESRSAQYNSKIRLYTIRHAMLGQLRKPPPGSEIVIRRHFYLQRQMILKQCHDWLEISEESEKGRLHL-AVEELRTELEKLA 1496          
BLAST of mRNA_L-elsbetiae_contig542.13651.1 vs. uniprot
Match: A0A7S0I4D9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0I4D9_9EUKA)

HSP 1 Score: 180 bits (456), Expect = 1.020e-48
Identity = 98/197 (49.75%), Postives = 133/197 (67.51%), Query Frame = 1
Query:  694 PPHPNSAVFAVFEEDALNFSRFVISGPVGTPYENGLFVFDVFLPANYPTDPPLVQMVTTGQGTVKFNANLYPDGKVCLSVLGKDSGASAGSGDKWNPETSSLWQVFVSIQTMVLTKDPYYNEGG--GRSNMRGRGTAETEEASAHENARVTLETIRHAAVANLRHPPKGCEELIRYHFRALRNRILLRCKKAVEQAP 1278
            P HP++A+    +E  ++  R V+SGPVGTPY  GLFVFDVF PA YP+ PPLV + TTG GTVKFN NLY DGKVCLS+LG  SG++A   +KW+P  S+++QV VSIQ+ +L  +P  NE G  G+ N     +A+++E     NA++ L T+RHA  A LR PP G E+ ++ HF A R+R+L +C    E+AP
Sbjct:    5 PLHPDAAILLRHDESRMDVMRAVLSGPVGTPYALGLFVFDVFCPAEYPSIPPLVHLETTGGGTVKFNPNLYADGKVCLSLLGTFSGSNAT--EKWDPTVSTIFQVLVSIQSQILVPNPMANEPGYDGKEN-----SAQSKEY----NAKLRLYTMRHAMTAVLRSPPAGFEDAVQAHFAAQRDRVLQQCWAWAEEAP 190          
BLAST of mRNA_L-elsbetiae_contig542.13651.1 vs. uniprot
Match: UPI000A2A8572 (LOW QUALITY PROTEIN: probable ubiquitin conjugation factor E4 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A8572)

HSP 1 Score: 194 bits (494), Expect = 7.090e-48
Identity = 104/217 (47.93%), Postives = 143/217 (65.90%), Query Frame = 1
Query:  694 PPHPNSAVFAVFEEDALNFSRFVISGPVGTPYENGLFVFDVFLPANYPTDPPLVQMVTTGQGTVKFNANLYPDGKVCLSVLGKDSGASAGSGDKWNPETSSLWQVFVSIQTMVLTKDPYYNEGGGRSNMRGRGTAETEEASAHENARVTLETIRHAAVANLRHPPKGCEELIRYHFRALRNRILLRCKKAVEQAPDERLKRATLRASAELRAEIDKL 1344
            P H NS++F   +E+ ++F+R +I+GPV TPY  G FVFDV+ P+NYP  PPLV+++TTG GTV+FN NLY DGKVC S+LG   G    S +KWNP+TSSL+QV +SIQ M+L  DP +NE G  S    RGT +  E S   NA + L TIRHA +A +R+PP G E+++  HFR  +  IL +  + ++Q  +   +R  LR   EL+ E+ KL
Sbjct:  954 PIHANSSIFVRQDEERMDFARTLITGPVDTPYSRGCFVFDVYFPSNYPNVPPLVKLITTGNGTVRFNPNLYADGKVCXSLLGTWHGGD--SSEKWNPKTSSLYQVLLSIQGMILIPDPCFNEPGYESI---RGTDDGNELSHKYNATIRLATIRHAILAQIRYPPAGFEDVVLTHFRLQKEYILRQVYEWLQQCREPDEERRMLRDIEELKVELHKL 1165          
BLAST of mRNA_L-elsbetiae_contig542.13651.1 vs. uniprot
Match: A0A6P4YX99_BRABE (uncharacterized protein LOC109473492 n=6 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4YX99_BRABE)

HSP 1 Score: 194 bits (494), Expect = 8.970e-48
Identity = 114/273 (41.76%), Postives = 163/273 (59.71%), Query Frame = 1
Query:  529 LALQYGDAMTELVHTQVEALSPGHYFDSRREGSILRQPRKVANEVMRNLPRTLPN-PPHPNSAVFAVFEEDALNFSRFVISGPVGTPYENGLFVFDVFLPANYPTDPPLVQMVTTGQGTVKFNANLYPDGKVCLSVLGKDSGASAGSGDKWNPETSSLWQVFVSIQTMVLTKDPYYNEGGGRSNMRGRGTAETEEASAHENARVTLETIRHAAVANLRHPPKGCEELIRYHFRALRNRILLRCKKAVEQAPDERLKRATLRASAELRAEIDKL 1344
            LA +Y  A+ ++     E      +  +  E    R P+  A  +M+ + +   N P HP +AVF   +ED ++  R +++GPV TPY  G FVFDV+ P  YP   P+V+++TTG GTV+FN NLY DGKVCLS+LG   G  A   +KWNP+TS+L+QV VSIQ+++L  DP YNE G    M+G  TAETEE SA  N ++ ++T+R A +  +R PP G E++IR HF   +  +L +C + +    DE       RA  EL+ E+DKL
Sbjct: 1172 LAEKYVQALGDMRFDAAELQEYHSFQQNASEALDPRSPKVKA--LMKEIKQLQSNLPVHPGAAVFVRQDEDRMDMVRALVTGPVDTPYSLGCFVFDVYFPDGYPNRAPVVKLITTGNGTVRFNPNLYADGKVCLSLLGTWHGGDAS--EKWNPKTSTLYQVLVSIQSLILISDPMYNEPG-YDGMKG--TAETEEQSAKYNNKLQVDTVRWAMLHQIRQPPVGFEDVIRRHFFLQKEAVLQQCCRWLRDCRDEEKLPKLRRAIEELKTELDKL 1437          
BLAST of mRNA_L-elsbetiae_contig542.13651.1 vs. uniprot
Match: A0A6P8IP25_ACTTE (uncharacterized protein LOC116303263 n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8IP25_ACTTE)

HSP 1 Score: 194 bits (493), Expect = 1.250e-47
Identity = 117/289 (40.48%), Postives = 164/289 (56.75%), Query Frame = 1
Query:  499 ETAEGVGADELALQYGDAMTE--LVHTQVEALSPGHYFDSRREGSILRQPRKVANEVMRNLPRTLPN-----PPHPNSAVFAVFEEDALNFSRFVISGPVGTPYENGLFVFDVFLPANYPTDPPLVQMVTTGQGTVKFNANLYPDGKVCLSVLGKDSGASAGSGDKWNPETSSLWQVFVSIQTMVLTKDPYYNEGGGRSNMRGRGTAETEEASAHENARVTLETIRHAAVANLRHPPKGCEELIRYHFRALRNRILLRCKKAVEQAPDERLKRATLRASAELRAEIDKL 1344
            ++AEGV   E+A    ++M E  L+  +          D         QP    +  +R L R +       P HPNS++F   +E+ ++F R +I+GPV TPY  G FVFDV+ P+ YP  PPLV+++TTG GT +FN NLY DGKVCLS+LG   G  A   +KW+P+ SSL QV +SIQ M+L  DP +NE G       RGT E ++ S   NA++ L T+RHA VA LR PP G E++I  HF+  +  IL +    ++Q  +   +R    A  EL+ E+DKL
Sbjct: 1257 DSAEGV--KEVAAASTESMEEMYLLRLKDACYDTAELMDVTAFQCFRSQPINTRSATIRTLMREITQLKESLPVHPNSSIFVRQDEERMDFVRALITGPVDTPYSRGCFVFDVYFPSTYPNVPPLVKLITTGNGTARFNPNLYQDGKVCLSLLGTWHGGDAS--EKWDPKKSSLCQVLLSIQGMILIPDPCFNEPGYEGI---RGTDEGDDLSRRSNAKIRLLTVRHAMVAQLRQPPAGLEDVILTHFKLQKEAILKQVSDWLQQCIEPEEERRMRNAVEELKIELDKL 1538          
BLAST of mRNA_L-elsbetiae_contig542.13651.1 vs. uniprot
Match: A0A1X7VA20_AMPQE (UBC core domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7VA20_AMPQE)

HSP 1 Score: 192 bits (488), Expect = 4.240e-47
Identity = 111/268 (41.42%), Postives = 156/268 (58.21%), Query Frame = 1
Query:  541 YGDAMTELVHTQVEALSPGHYFDSRREGSILRQPRKVANEVMRNLPRTLPNPPHPNSAVFAVFEEDALNFSRFVISGPVGTPYENGLFVFDVFLPANYPTDPPLVQMVTTGQGTVKFNANLYPDGKVCLSVLGKDSGASAGSGDKWNPETSSLWQVFVSIQTMVLTKDPYYNEGGGRSNMRGRGTAETEEASAHENARVTLETIRHAAVANLRHPPKGCEELIRYHFRALRNRILLRCKKAVEQAPDERLKRATLRASAELRAEIDKL 1344
            Y  A  E VH+  +   P     S R  +ILR  +++   +            HP+S+V+   +E+ ++  R +I+GPV TPY  G FVFDVF P NYP DPPLV + TTG GT++FN NLY DGKVCLS+LG   G    S +KWNP  S+L QVF+SIQ ++L  +P YNE G  +     GT + +  S+H NA + + TIR+A +  LRHPP G E+ ++ HF  LR  IL +C K ++       ++   +A  ELR E++KL
Sbjct:  956 YDSASLEGVHSLEDRAVPSADPRSPRLMAILRDIKQLQESLSV----------HPDSSVYVRQDEERMDLVRVLITGPVDTPYSYGCFVFDVFYPTNYPVDPPLVLLTTTGNGTIRFNPNLYADGKVCLSLLGTWHGGD--SSEKWNPLQSNLLQVFISIQGLILIPEPIYNEPGYEAMQ---GTPQGKIRSSHYNAYIQVNTIRYAMLEQLRHPPAGFEDTVKIHFMLLREVILQQCSKWLKNTVSADHEQKLRKAVNELREELEKL 1208          
BLAST of mRNA_L-elsbetiae_contig542.13651.1 vs. uniprot
Match: UPI001EAF8EF7 (uncharacterized protein LOC124149515 isoform X1 n=12 Tax=Haliotis rufescens TaxID=6454 RepID=UPI001EAF8EF7)

HSP 1 Score: 192 bits (487), Expect = 7.420e-47
Identity = 101/234 (43.16%), Postives = 149/234 (63.68%), Query Frame = 1
Query:  586 LSPGHYFDSRREGSILRQPR-KVANEVMRNLPRTLPNPPHPNSAVFAVFEEDALNFSRFVISGPVGTPYENGLFVFDVFLPANYPTDPPLVQMVTTGQGTVKFNANLYPDGKVCLSVLGKDSGASAGSGDKWNPETSSLWQVFVSIQTMVLTKDPYYNEGGGRSNMRGRGTAETEEASAHENARVTLETIRHAAVANLRHPPKGCEELIRYHFRALRNRILLRCKKAVEQAPDE 1284
            +   H + S  +    R P+ KV  + M+ L + LP   HPN+A+F V EE+ ++  R +++GPVGTPY  G FVFD++ PA+YP   PLV+++TTG G+V+FN NLY DGKVCLS+LG   G  A   +KWNP  SS++QV VSIQ+++L  DP +NE G    M+G+   E +  S   N ++ L T+RHA +  LR+PP G E++IR HF   ++ +L +C+  + +  DE
Sbjct: 1391 IQESHSYLSNLQSLDPRSPKVKVLMKEMKQLQQNLPV--HPNAAIFVVQEEERIDVMRALVTGPVGTPYSLGCFVFDIYFPASYPNSAPLVKIITTGGGSVRFNPNLYSDGKVCLSLLGTWHGGDAS--EKWNPAKSSIYQVLVSIQSLILIPDPMFNEPG-YEGMKGK--TEGDRQSTAYNWKIRLNTLRHAVLGQLRNPPPGLEKVIRQHFAVQKDCVLRQCRDWLAECQDE 1617          
BLAST of mRNA_L-elsbetiae_contig542.13651.1 vs. uniprot
Match: A0A2B4RX76_STYPI (Baculoviral IAP repeat-containing protein 6 n=2 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4RX76_STYPI)

HSP 1 Score: 191 bits (486), Expect = 9.460e-47
Identity = 104/233 (44.64%), Postives = 143/233 (61.37%), Query Frame = 1
Query:  646 KVANEVMRNLPRTLPNPPHPNSAVFAVFEEDALNFSRFVISGPVGTPYENGLFVFDVFLPANYPTDPPLVQMVTTGQGTVKFNANLYPDGKVCLSVLGKDSGASAGSGDKWNPETSSLWQVFVSIQTMVLTKDPYYNEGGGRSNMRGRGTAETEEASAHENARVTLETIRHAAVANLRHPPKGCEELIRYHFRALRNRILLRCKKAVEQAPDERLKRATLRASAELRAEIDKL 1344
            + A ++  NLP       HPNS++    +E+ ++F R +I+G   TPY  G FVFD++ P++YP DPPLV+++TTG GTV+FN NLY DGKVCLS+LG   G  A   +KW+P+ SSL+QV +SIQ M+ T DP +NE G       +GT E +      NAR+ L TIRHA V  LR P  G EE IR HFR  +  +L +C + + Q  D    R   +A   L++E+DKL
Sbjct: 1319 REATQLKNNLPI------HPNSSILVRQDENRMDFVRALITGTADTPYSRGCFVFDIYFPSSYPVDPPLVKIITTGNGTVRFNPNLYADGKVCLSLLGTWHGGDAS--EKWDPKKSSLYQVLLSIQGMMFTPDPCFNEPGYEGI---KGTDEGDALCKEYNARIKLHTIRHAMVGQLREPAPGFEEAIRTHFRLQKEAVLKQCAEWLTQCTDAEEDRRMRKAVDTLKSELDKL 1540          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig542.13651.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBB4_ECTSI5.310e-16575.58UBC core domain-containing protein n=2 Tax=Ectocar... [more]
A0A7S2WEL6_9STRA4.250e-5347.20Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A1S3HBG2_LINUN2.870e-4943.17uncharacterized protein LOC106153808 isoform X1 n=... [more]
A0A7S0I4D9_9EUKA1.020e-4849.75Hypothetical protein (Fragment) n=1 Tax=Phaeocysti... [more]
UPI000A2A85727.090e-4847.93LOW QUALITY PROTEIN: probable ubiquitin conjugatio... [more]
A0A6P4YX99_BRABE8.970e-4841.76uncharacterized protein LOC109473492 n=6 Tax=Branc... [more]
A0A6P8IP25_ACTTE1.250e-4740.48uncharacterized protein LOC116303263 n=1 Tax=Actin... [more]
A0A1X7VA20_AMPQE4.240e-4741.42UBC core domain-containing protein n=1 Tax=Amphime... [more]
UPI001EAF8EF77.420e-4743.16uncharacterized protein LOC124149515 isoform X1 n=... [more]
A0A2B4RX76_STYPI9.460e-4744.64Baculoviral IAP repeat-containing protein 6 n=2 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig542contigL-elsbetiae_contig542:9994..13605 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score534.6
Seed ortholog evalue3.7e-149
Seed eggNOG ortholog2880.D8LBB4
KEGG koko:K10581
KEGG Pathwayko04120,map04120
Hectar predicted targeting categoryother localisation
EggNOG free text desc.protein modification by small protein conjugation
EggNOG OGsCOG5078@1,KOG0895@2759
EC2.3.2.24
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04121
Exons5
Model size2362
Cds size1167
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816566.9999776-UTR-L-elsbetiae_contig542:9993..101761622816566.9999776-UTR-L-elsbetiae_contig542:9993..10176Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig542 9994..10176 +
1691683652.3336346-UTR-L-elsbetiae_contig542:9993..101761691683652.3336346-UTR-L-elsbetiae_contig542:9993..10176Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig542 9994..10176 +
1622816567.0643275-UTR-L-elsbetiae_contig542:12593..136051622816567.0643275-UTR-L-elsbetiae_contig542:12593..13605Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig542 12594..13605 +
1691683652.406285-UTR-L-elsbetiae_contig542:12593..136051691683652.406285-UTR-L-elsbetiae_contig542:12593..13605Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig542 12594..13605 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816567.0125582-CDS-L-elsbetiae_contig542:10176..105691622816567.0125582-CDS-L-elsbetiae_contig542:10176..10569Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig542 10177..10569 +
1691683652.3503067-CDS-L-elsbetiae_contig542:10176..105691691683652.3503067-CDS-L-elsbetiae_contig542:10176..10569Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig542 10177..10569 +
1622816567.0245135-CDS-L-elsbetiae_contig542:10871..111821622816567.0245135-CDS-L-elsbetiae_contig542:10871..11182Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig542 10872..11182 +
1691683652.367234-CDS-L-elsbetiae_contig542:10871..111821691683652.367234-CDS-L-elsbetiae_contig542:10871..11182Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig542 10872..11182 +
1622816567.0346067-CDS-L-elsbetiae_contig542:11446..115641622816567.0346067-CDS-L-elsbetiae_contig542:11446..11564Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig542 11447..11564 +
1691683652.376887-CDS-L-elsbetiae_contig542:11446..115641691683652.376887-CDS-L-elsbetiae_contig542:11446..11564Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig542 11447..11564 +
1622816567.0446787-CDS-L-elsbetiae_contig542:11843..118981622816567.0446787-CDS-L-elsbetiae_contig542:11843..11898Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig542 11844..11898 +
1691683652.3856046-CDS-L-elsbetiae_contig542:11843..118981691683652.3856046-CDS-L-elsbetiae_contig542:11843..11898Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig542 11844..11898 +
1622816567.0544398-CDS-L-elsbetiae_contig542:12303..125931622816567.0544398-CDS-L-elsbetiae_contig542:12303..12593Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig542 12304..12593 +
1691683652.394068-CDS-L-elsbetiae_contig542:12303..125931691683652.394068-CDS-L-elsbetiae_contig542:12303..12593Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig542 12304..12593 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig542.13651.1prot_L-elsbetiae_contig542.13651.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig542 10177..12593 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig542.13651.1

>prot_L-elsbetiae_contig542.13651.1 ID=prot_L-elsbetiae_contig542.13651.1|Name=mRNA_L-elsbetiae_contig542.13651.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=389bp
MRQTDLGGMTCKLLVGLTEHGATGSTRTFAVALHDSDPEFDGELLEAVAK
EEGGERLREMVLESLSRALEEDDGDRRRADEEQASEAAVAGGGHGGAGDP
FEGVLETAEGVGADELALQYGDAMTELVHTQVEALSPGHYFDSRREGSIL
RQPRKVANEVMRNLPRTLPNPPHPNSAVFAVFEEDALNFSRFVISGPVGT
PYENGLFVFDVFLPANYPTDPPLVQMVTTGQGTVKFNANLYPDGKVCLSV
LGKDSGASAGSGDKWNPETSSLWQVFVSIQTMVLTKDPYYNEGGGRSNMR
GRGTAETEEASAHENARVTLETIRHAAVANLRHPPKGCEELIRYHFRALR
NRILLRCKKAVEQAPDERLKRATLRASAELRAEIDKLS*
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mRNA from alignment at L-elsbetiae_contig542:9994..13605+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig542.13651.1 ID=mRNA_L-elsbetiae_contig542.13651.1|Name=mRNA_L-elsbetiae_contig542.13651.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3612bp|location=Sequence derived from alignment at L-elsbetiae_contig542:9994..13605+ (Laminarionema elsbetiae ELsaHSoW15)
GGTTTAGACAAGGTGTGTTATGTCGTCGTAGTTTGTGCTTGTCTCGCTGT GCACATTCCAACACGTACATATCTATCTACATGGTTGGGTGGTAGACTAG TATCATTTCGTGTGGAAGCGCTGTTGCTCCCAAGCAAGTTAGAGCTATTT CCATCCAGGCCCAACCCCGGCCATACAACCTTTATGCGGCAGACCGACCT CGGAGGAATGACGTGTAAGCTGCTGGTAGGCTTGACCGAGCACGGGGCCA CCGGTTCAACCCGAACTTTTGCGGTGGCGTTGCATGACTCCGACCCCGAG TTCGATGGCGAGCTCTTGGAGGCGGTAGCGAAAGAAGAAGGTGGAGAGCG CCTGCGCGAGATGGTGTTAGAGAGCCTTTCGCGGGCCCTCGAGGAAGACG ACGGAGATCGCCGTAGAGCGGATGAGGAGCAAGCATCAGAGGCGGCAGTT GCAGGAGGAGGACACGGCGGTGCTGGAGATCCGTTCGAAGGGGTTCTGGA GACGGCGGAAGGCGTTGGCGCCGACGAGTTGGCTCTTCAGTACGGAGACG CAATGACTGAGCTGGTTCACACGCAGGTGGCATATGAGTTGGACTGCGTG TCTGGTGTTTTATTAAGCTTTGGTGTAACTAGGCAGTGTGCGTTATGGCC GGAAGGTGGTTAATGCCGGGGGTAGGATGGTGAATGGCTGTTTATGCGGA GAGCTCCCATCGCCCTCGGTCGCTCTGTTGTACCATACTGTAATCGTGCG CCTTGTCTTACAACCGCACTTGGGAGCATGAGAACGTGCGGACACACAGT TGCCCCCCCCCCATAATGTTCGGAACCACATCTACTTCTTGACCTACTTC ATGCTGGAAACGAATCGCGGCTACGCAGGTGGAGGCGCTATCACCCGGGC ACTACTTTGACAGCCGGAGGGAGGGATCTATCCTGAGGCAGCCCCGCAAA GTGGCCAACGAAGTGATGCGAAATCTCCCGCGCACGCTGCCAAACCCGCC CCACCCGAACTCGGCAGTGTTTGCCGTGTTCGAGGAGGACGCCCTTAACT TTTCTCGCTTCGTCATATCGGGCCCTGTGGGCACGCCCTATGAAAACGGG CTGTTCGTCTTCGACGTGTTTTTGCCGGCGAACTATCCTACCGACCCACC TTTGGTGCAAATGGTCACGACGGGGCAAGGGACGGTCAAGTGAGTTGGTT GTTTTACCCCTCACGTGTGCTACCTACAGTAAACGATTAAGTTCATCGTG TTTACAGAGATGCACATATATTTCTCGTGTGTCAAGAGCCTTACACGGCC GCACGGTACGGTGTGAAAAGGGAGCCCAGTTGTCTATAAGACGAGGTCCT TATGTTGCTTCGGGGGGGGTGGATTTGGTCTTTTCACGCCCCGAAAGGGC CGTGCTGTCCACCTCGATAACCAAACTCATTGCGTCTTATCGGTCCTTGG CAGGTTCAACGCCAATCTTTACCCTGATGGTAAGGTGTGTCTCAGCGTGC TCGGAAAGGACTCCGGGGCCAGCGCTGGCAGCGGAGACAAGTGGAATCCA GAGACAAGCTCATTGTGGCAGGTATTCAATCACACGCTCTAGCGTTCACC ACGTGTGCCACAATTTTCTGTGCTCACCCTATCCCGAATGAATCGGTCTG TCAATAATCAGGCCGCTTTGAGTCGATGCTACCCGGAAAATCTCACTGAC GCACCGTCCTTTCAGTTGAGGCGGTCGGAAGCTCAGGGGGTGCATAGACT GTGCAATAGCCTCCTAAATAAGAATCGATCGGTTCTCGAGAGCTTTGTAT GATCCCGTTGGCTTTCAACCGCTCCGTATGGCGTCGCTCATATACCACAG GTGTTCGTGTCTATCCAGACCATGGTGCTCACGAAGGATCCATACTACAA CGAAGGCGAGTTTTTTGCCGCGAACTGACGGTTGGGTGGCCATCCGGAAG GTAGTTCAATCCCAGACGTACGTGTGGTTCTTCCGAAAGAAGTGATAGGA AAAAAATCCACGGTATGCTTCCGGGAGCACAGCAGCCATCATTCTGTCAA GAATATGGGTTGGCGCTTTACGAAGTTGAAAGATGTAAATATACCGTACG CAATCCAAAAACTGCACGAAATACTAGTACGACAAATCTTATTCGATACC GTTGGGTTTCTCTTCCGCCCTTCCTGATTCAGTCAGGGTATTAGAGATCC ATTCCTGAGGCGGAGAAAGAGGGTTGGATCTTGAAAATCTTGTCCCCAAT GGCCAACCGAAAGTCGAGGTTGACATCATTTTCCCGAGCAACCAACCTAA ACTTTATCAGGTGGAGGGCGCAGCAACATGCGCGGCCGAGGGACCGCAGA AACGGAAGAAGCCTCCGCTCACGAGAACGCCCGCGTGACTCTGGAAACCA TTCGGCATGCCGCCGTCGCAAACCTTCGCCACCCGCCCAAGGGCTGCGAG GAGCTCATCCGATACCACTTTCGGGCGCTCCGGAACCGCATCCTCCTGCG GTGCAAGAAGGCCGTAGAGCAGGCCCCCGACGAACGCCTCAAGCGGGCCA CGCTGAGGGCGTCGGCTGAGCTGAGAGCGGAGATTGACAAGTTGTCTTGA GGCACGCGAGCAGAACGAAATCTGCGAGCCCACGAGAGAGTTCAGAGAAG CAACAAGATATAACCATGTAGGAGTGTGACGTTGGGCCAAGGGAAGATGC GATGAAAGAGTCATGCGATAGGTACCGAGCCTTGAAGACCGAAGAAACTG TTCATGCAGCAGATAAACGTAAACCCGCAACTAACGCCCGGGTTGTGCAG CGCTCTACCGATCAGGGCAAAAAGGGGTAGTGTATAGAAGATTGGCTTTG TGTTTGAGGGTTGCAAGAGTCTCGAGGATGAGTAAAATATTGTAACCGTC ATTGTATTTAGTGATTTTCGAAGTCCGGTGTGAATCGCGAGTTCTTTTTC ATATTACCTTACAACAGGAGGGTGGGGGTTGGCTTTGTGTTTGAGGGTTG CAAGAGTCGCGGGGGTGAGTTAAGCATTGCAACCACCATTCGTTGTATAT AGTGATTTTTCGGCGTGAATCAAGAGTACTTTCTTCATATTACACCAGTA GAGCTTTGCAACAGAGGGGGGGGGGGGCAGAAAGGAAAATTGTAGGCGTT CATTGCGCAATAGCCGTGCAGGTCACTAGTGGTGTGGGTTTTCTTGCTCT ATTCACAGGGCTTATATTTTTCGTGCCTTCATAGTAGTGAAGTGAACGGC TCGTTGCATGCGTGGTCTCGATTTTGCACGACGGCGGCTTCTTCATGTTT TGCAATGTCGAAGGAGGTGATGATGCCCTACGTAGTGCTTGCTGTAGGAG GGTGCCACGAAGGTACCCTTACAACTTGAAACCAACACGAGCTTCAATAT GCGGAAACACAAACCCACCCACTGGGTGCACCCTCATGTACGCTTGGCTG CGTCGTTGGCACAACTTCTGTCGGCATTTAAAAGGTCACCTGGATGTTTG CATTACATATGTACAAGTATTGCACCGCTTCGTAATATCATGTCCGCCGC CGCGCTCGCTCGTAGGCGGCAGGGCGATGCCAAGTGTTCCCATGGTTTGT GAGTAGGATATG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig542:9994..13605+

>mRNA_L-elsbetiae_contig542.13651.1 ID=mRNA_L-elsbetiae_contig542.13651.1|Name=mRNA_L-elsbetiae_contig542.13651.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2334bp|location=Sequence derived from alignment at L-elsbetiae_contig542:9994..13605+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCGGCAGACCGACCTCGGAGGAATGACGTGTAAGCTGCTGGTAGGCTT
GACCGAGCACGGGGCCACCGGTTCAACCCGAACTTTTGCGGTGGCGTTGC
ATGACTCCGACCCCGAGTTCGATGGCGAGCTCTTGGAGGCGGTAGCGAAA
GAAGAAGGTGGAGAGCGCCTGCGCGAGATGGTGTTAGAGAGCCTTTCGCG
GGCCCTCGAGGAAGACGACGGAGATCGCCGTAGAGCGGATGAGGAGCAAG
CATCAGAGGCGGCAGTTGCAGGAGGAGGACACGGCGGTGCTGGAGATCCG
TTCGAAGGGGTTCTGGAGACGGCGGAAGGCGTTGGCGCCGACGAGTTGGC
TCTTCAGTACGGAGACGCAATGACTGAGCTGGTTCACACGCAGATGCGGC
AGACCGACCTCGGAGGAATGACGTGTAAGCTGCTGGTAGGCTTGACCGAG
CACGGGGCCACCGGTTCAACCCGAACTTTTGCGGTGGCGTTGCATGACTC
CGACCCCGAGTTCGATGGCGAGCTCTTGGAGGCGGTAGCGAAAGAAGAAG
GTGGAGAGCGCCTGCGCGAGATGGTGTTAGAGAGCCTTTCGCGGGCCCTC
GAGGAAGACGACGGAGATCGCCGTAGAGCGGATGAGGAGCAAGCATCAGA
GGCGGCAGTTGCAGGAGGAGGACACGGCGGTGCTGGAGATCCGTTCGAAG
GGGTTCTGGAGACGGCGGAAGGCGTTGGCGCCGACGAGTTGGCTCTTCAG
TACGGAGACGCAATGACTGAGCTGGTTCACACGCAGGTGGAGGCGCTATC
ACCCGGGCACTACTTTGACAGCCGGAGGGAGGGATCTATCCTGAGGCAGC
CCCGCAAAGTGGCCAACGAAGTGATGCGAAATCTCCCGCGCACGCTGCCA
AACCCGCCCCACCCGAACTCGGCAGTGTTTGCCGTGTTCGAGGAGGACGC
CCTTAACTTTTCTCGCTTCGTCATATCGGGCCCTGTGGGCACGCCCTATG
AAAACGGGCTGTTCGTCTTCGACGTGTTTTTGCCGGCGAACTATCCTACC
GACCCACCTTTGGTGCAAATGGTCACGACGGGGCAAGGGACGGTCAAGTG
GAGGCGCTATCACCCGGGCACTACTTTGACAGCCGGAGGGAGGGATCTAT
CCTGAGGCAGCCCCGCAAAGTGGCCAACGAAGTGATGCGAAATCTCCCGC
GCACGCTGCCAAACCCGCCCCACCCGAACTCGGCAGTGTTTGCCGTGTTC
GAGGAGGACGCCCTTAACTTTTCTCGCTTCGTCATATCGGGCCCTGTGGG
CACGCCCTATGAAAACGGGCTGTTCGTCTTCGACGTGTTTTTGCCGGCGA
ACTATCCTACCGACCCACCTTTGGTGCAAATGGTCACGACGGGGCAAGGG
ACGGTCAAGTTCAACGCCAATCTTTACCCTGATGGTAAGGTGTGTCTCAG
CGTGCTCGGAAAGGACTCCGGGGCCAGCGCTGGCAGCGGAGACAAGTGGA
ATCCAGAGACAAGCTCATTGTGGCAGGTTCAACGCCAATCTTTACCCTGA
TGGTAAGGTGTGTCTCAGCGTGCTCGGAAAGGACTCCGGGGCCAGCGCTG
GCAGCGGAGACAAGTGGAATCCAGAGACAAGCTCATTGTGGCAGGTGTTC
GTGTCTATCCAGACCATGGTGCTCACGAAGGATCCATACTACAACGAAGG
TGTTCGTGTCTATCCAGACCATGGTGCTCACGAAGGATCCATACTACAAC
GAAGGTGGAGGGCGCAGCAACATGCGCGGCCGAGGGACCGCAGAAACGGA
AGAAGCCTCCGCTCACGAGAACGCCCGCGTGACTCTGGAAACCATTCGGC
ATGCCGCCGTCGCAAACCTTCGCCACCCGCCCAAGGGCTGCGAGGAGCTC
ATCCGATACCACTTTCGGGCGCTCCGGAACCGCATCCTCCTGCGGTGCAA
GAAGGCCGTAGAGCAGGCCCCCGACGAACGCCTCAAGCGGGCCACGCTGA
GGGCGTCGGCTGAGCTGAGAGCGGAGATTGACAAGTTGTCTTGAGTGGAG
GGCGCAGCAACATGCGCGGCCGAGGGACCGCAGAAACGGAAGAAGCCTCC
GCTCACGAGAACGCCCGCGTGACTCTGGAAACCATTCGGCATGCCGCCGT
CGCAAACCTTCGCCACCCGCCCAAGGGCTGCGAGGAGCTCATCCGATACC
ACTTTCGGGCGCTCCGGAACCGCATCCTCCTGCGGTGCAAGAAGGCCGTA
GAGCAGGCCCCCGACGAACGCCTCAAGCGGGCCACGCTGAGGGCGTCGGC
TGAGCTGAGAGCGGAGATTGACAAGTTGTCTTGA
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