mRNA_L-elsbetiae_contig5406.13634.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5406.13634.1 vs. uniprot
Match: A0A6H5JJI9_9PHAE (SPRY domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJI9_9PHAE) HSP 1 Score: 448 bits (1153), Expect = 2.850e-145 Identity = 264/538 (49.07%), Postives = 326/538 (60.59%), Query Frame = 1
Query: 1 NVTLQDICRSMVGAWPTSIDDSFRMQGGTRLQACVDGVVQPFDLAPKIGGSSGSSGN----NNGDACLLGTENTGLCSGVVFRGHLGGDRAVRANVPFPFLGTMESHRNGARFKPSEKDFSHGC-VVMTAQTVYDPTVQMQYPDEFLARVKNDAPFSLLWPGHAPCGKDTPTAPKEGVGSSSGGSXXXXXXXXXXXAAFGVLGDEEIRQELERLTSSGPAPFFHAGYTAYFEITLEETVAPLEKPREDEKLRMECVAIGLANDRFRLKGKQPGWDGRSWGMHSDDGLFYHD--FQTSGSLDSFTFGPGDTVGCGLLYPRGLQHFDRRRVSDRTSAVP-ARKDYCGGGQGAIFFTKNGRFLGIAFRYVDIKRPLYPVIGLDSHCLVTANFGAKAFAFDMPAFESWFTGTKLNCYAPSAPDKHDKRAV---IKTVYSGRKGFTNPRLLCPYIRLTDMEEEEKERNKSGEGKKVPRPTRNMYPGATR--HSQSEILRKSLRASSTSNGVYELGSSDIDES--DMDEYWGAFEVESDSDYEW 1569
N+TLQDICR MVGAWPT ID +R LQA + GV+QP GG SGS + D L GLC GVVFRG LGGDRAVRANVPFP+ G + P D S G +V T YD V + YPD LARVK APF+LLWPGHA G G GGS V +E +R ++ERL SSGPAPFFHAGYTAYFEITL +T+APLE+PR+++ +CVAIGLA+D F L+ KQPGWD SWG+HSDDG F+H + D TFGPGDTVGCGLLYPRGL H++ +S R A+P A ++ GG GA+FFTKNGR+LG+A R V++KRPLYP +GLDSHC VT NFG K FAFD+PAFE+ FTG L SAP ++R IK VY GR GFTNPRLLCP++RL +EE + + +VP+ TR P S+SE+LR+SL++ +S+ L +++ D S D+ W E E + +EW
Sbjct: 115 NLTLQDICRCMVGAWPTHIDRHWRAD--ELLQASIGGVLQPLQAGAAGGGVSGSGADPENAQQADTALA----AGLCDGVVFRGGLGGDRAVRANVPFPWAGCGRTRTQ----PPCGADMSRGARLVRMELTTYDRPVYLHYPDVVLARVKAGAPFALLWPGHAAAA---------GGGEGEGGSGEDSRGGNVGHGGL-VDENERVRLKVERLPSSGPAPFFHAGYTAYFEITLGDTMAPLEQPRDEDFHLEQCVAIGLAHDNFPLEDKQPGWDRNSWGLHSDDGCFHHRGAIALPATADPTTFGPGDTVGCGLLYPRGLAHYEHW-LSGRGGALPTAGENDSGGNNGAVFFTKNGRYLGMASRRVNVKRPLYPCVGLDSHCCVTVNFGVKPFAFDVPAFEALFTGAALG----SAPPVRERRCHTDDIKNVYCGRNGFTNPRLLCPHLRLQPPVDEEGQ-----DDARVPKTTRGSVPKGVGVLASESELLRRSLKSIRSSSPHVNLLAAESDNSGNSSDDSWLMSEEEYSNIHEW 622
BLAST of mRNA_L-elsbetiae_contig5406.13634.1 vs. uniprot
Match: D7G760_ECTSI (SPRY domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G760_ECTSI) HSP 1 Score: 291 bits (744), Expect = 7.620e-87 Identity = 200/498 (40.16%), Postives = 247/498 (49.60%), Query Frame = 1
Query: 1 NVTLQDICRSMVGAWPTSIDDSFRMQGGTRLQACVDGVVQPFDLAPKIGGSSGSSGN----NNGDACLLGTENTGLCSGVVFRGHLGGDRAVRANVPFPFLGTMESHRNGARFKPSEKDFSHGCVVMTAQTVYDPTVQMQYPDEFLARVKNDAPFSLLWPGHAPCGKDTPTAPKEGVGSSSGGSXXXXXXXXXXXAAFGVLGDEEIRQELERLTSSGPAPFFHAGYTAYFEITLEETVAPLEKPREDEKLRMECVAIGLANDRFRL-KGKQPGWDGRSWGMHSDDGLFYHD--FQTSGSLDSFTFGPGDTVGCGLLYPRGLQHFDRRRVSDRTSAVP-ARKDYCGGGQGAIFFTKNGRFLGIAFRYVDIKRPLYPVIGLDSHCLVTANFGAKAFAFDMPAFESWFTGTKLNCYAPSAPDKHDKRAV---IKTVYSGRKGFTNPRLLCPYIRLTDMEEEEKERNKSGEGKKVPRPTRNMYPGA-TRHSQSEILRKSLRA 1458
N+TLQDICR MVGAWPT ID +R LQA + GV+QP GG SGS + D L GLC GVVFRG LGGDRAVRANVPFP+ G CG+ P+ G S G S ++ EL + A A TA E++ G A R K KQPGWD SWG+HSDDG F+H S + D TFGPGDTVGCGLLYPRGL H++ +S R A+P A ++ GG +GAIFFTKNGR+LG+A R V++KRPLYP +GLDSHC V NFGAK FAFD+PAFE+ FTG L SAP ++R IK VYSGR GFTNPR+LCP++RL +EE++ + +VP+ TRN+ G S+SE+LR+SL++
Sbjct: 91 NLTLQDICRCMVGAWPTHIDRHWRAD--ELLQASIGGVLQPLQAGAASGGVSGSDADPENAQRADTALA----AGLCDGVVFRGGLGGDRAVRANVPFPWAG--------------------------------------------------------------CGRTRSQRPR-GADMSRGSSL--------------------VKMELTTYDRAKAA----AARTAAVEMS------------------------GTAGWSTRTRKDKQPGWDRNSWGLHSDDGCFHHRGAIALSATADPTTFGPGDTVGCGLLYPRGLAHYEHW-LSGRGGALPTAGENDSGGSKGAIFFTKNGRYLGMASRRVNVKRPLYPCVGLDSHCCVAVNFGAKPFAFDVPAFEALFTGAALG----SAPPVRERRCHTDDIKKVYSGRNGFTNPRVLCPHLRLQPPVDEERQNDA-----RVPKTTRNVPKGVGVLASESELLRRSLKS 461
BLAST of mRNA_L-elsbetiae_contig5406.13634.1 vs. uniprot
Match: A0A812V455_9DINO (RanBPM protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812V455_9DINO) HSP 1 Score: 107 bits (267), Expect = 4.850e-21 Identity = 68/189 (35.98%), Postives = 94/189 (49.74%), Query Frame = 1
Query: 670 AYFEITLEET--VAPLEKPREDEKLRMECVAIGLANDRFR---LKGKQPGWDGRSWGMHSDDGLFYH---------DFQTSGSLDSFTFGPGDTVGCGLLYPRGLQHFD----RRRVSDRTSAVPARKDYCGGGQGAIFFTKNGRFLGIAFRYVDIKR--PLYPVIGLDSHCLVTANFGAKAFAFDMPA 1176
+Y+E+T+ V + R+ E+ + C+++GL RF + +Q GWDG SWG+HSDDG +H D + G L TFG GD VGCG+ G D + R A RK IF+T NG FLG AF + PL+P +GLD+ L++ NFG K F FD+ A
Sbjct: 193 SYYEVTVSGAGGVGACRRGRDREEAVLLCISVGLCTPRFSRYAVAKQQAGWDGESWGLHSDDGQLFHASNRGYQFADAKVPGPL---TFGEGDVVGCGICQLPGSSFGDCEASQVTAGPRALAQAKRK---------IFYTLNGAFLGFAFDLDQVPWDVPLWPCVGLDTKQLLSFNFGQKPFKFDLDA 369
BLAST of mRNA_L-elsbetiae_contig5406.13634.1 vs. uniprot
Match: A0A7S0PIR2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0PIR2_9STRA) HSP 1 Score: 108 bits (269), Expect = 5.040e-21 Identity = 64/185 (34.59%), Postives = 89/185 (48.11%), Query Frame = 1
Query: 670 AYFEITL-----EETVAPLEKPREDEKLRMECVAIGLANDRFRLKGKQPGWDGRSWGMHSDDGLFYHDFQTSGSLDSFTFGPGDTVGCGLLYPRGLQHFDRRRVSDRTSAVPARKDYCGGGQGAIFFTKNGRFLGIAFRYVDIKRPLYPVIGLDSHCLVTANFGAKAFAFDMPAFESWFTGTKLN 1209
AY+E+T+ E+ E+E L ++CVA+G+A DRF K K PGWD S+G H DDG +H FG GDTVGCG+ + IFFT NG FLG A+ V +RP Y +G+DS+ ++ANFG F FD+ +F + G ++
Sbjct: 297 AYYEVTIHEKRSEDGALGTNIISEEENL-IDCVAVGIATDRFNEKHKMPGWDNFSYGYHGDDGGIFHARGDMVKQYGPKFGVGDTVGCGINFANN----------------------------GIFFTLNGIFLGYAWLGVCTQRPFYASVGVDSNFPISANFGRIPFKFDLTSFHEQYCGKVIS 452
BLAST of mRNA_L-elsbetiae_contig5406.13634.1 vs. uniprot
Match: A0A813CLN6_9DINO (GluProRS protein n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A813CLN6_9DINO) HSP 1 Score: 107 bits (266), Expect = 6.930e-20 Identity = 72/212 (33.96%), Postives = 100/212 (47.17%), Query Frame = 1
Query: 670 AYFEITLEET-VAPLEKPREDEKLRMECVAIGLANDRFR---LKGKQPGWDGRSWGMHSDDGLFYH---------DFQTSGSLDSFTFGPGDTVGCGLLYPRGLQHFDRRRVSDRTSAVPARKDYCGGGQGAIFFTKNGRFLGIAFRYVDIKR--PLYPVIGLDSHCLVTANFGAKAFAFDMPAFESWFTGTK----------LNCYAPSAP 1230
+Y+E+T+ V + R+ E+ + C+++GL RF + +Q GWDG SWG+HSDDG +H D + +G L TFG GD VGCG+ D S V A + IF+T NG FLG AF + PL+P +GLD+ L++ NFG K F FD+ S K LN AP+ P
Sbjct: 1801 SYYEVTVGGAGVGACRRGRDREEAVLHCISVGLCTPRFSRYAVAKQQAGWDGESWGLHSDDGQLFHASNRGYQFADAKVAGPL---TFGAGDVVGCGICQLPASSFGDCE-----ASQVTAGPRPLAHAKRKIFYTLNGAFLGFAFDLDQVPWDVPLWPCVGLDTKQLLSFNFGQKPFNFDLDTMPSLVVELKTVFDTVSVWPLNFSAPATP 2004
BLAST of mRNA_L-elsbetiae_contig5406.13634.1 vs. uniprot
Match: A0A835ZEA9_9STRA (B30.2/SPRY domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEA9_9STRA) HSP 1 Score: 106 bits (265), Expect = 7.460e-20 Identity = 64/147 (43.54%), Postives = 78/147 (53.06%), Query Frame = 1
Query: 745 ECVAIGLANDRFRLKGKQPGWDGRSWGMHSDDGLFYHDFQTSGSLDSFTFGPGDTVGCGLLYPRGLQHFDRRRVSDRTSAVPARKDYCGGGQGAIFFTKNGRFLGIAFRYVDIKRPLYPVIGLDSHCLVTANFGAKA-FAFDMPAFE 1182
EC+AIGL+ ++F L+GK PGWD S+G HSDDG +H+ + TFG GD VGCGL Y G GG IFFT NGR+LG+AF V LYP +G+DS V N G A FAF + AFE
Sbjct: 1294 ECIAIGLSEEQFTLQGKMPGWDSCSYGYHSDDGGAFHNAGSMLFRYGPTFGRGDVVGCGLDYSHG-----------------------GGVCADIFFTLNGRYLGVAFAGVRAGG-LYPTVGIDSAAPVRINLGGAAPFAFGVGAFE 1416
BLAST of mRNA_L-elsbetiae_contig5406.13634.1 vs. uniprot
Match: B7FWC1_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FWC1_PHATC) HSP 1 Score: 105 bits (261), Expect = 7.730e-20 Identity = 62/181 (34.25%), Postives = 85/181 (46.96%), Query Frame = 1
Query: 670 AYFEITLEETVAPLEKPREDEKLR-----------MECVAIGLANDRFRLKGKQPGWDGRSWGMHSDDGLFYHDFQTSGSLDSFTFGPGDTVGCGLLYPRGLQHFDRRRVSDRTSAVPARKDYCGGGQGAIFFTKNGRFLGIAFRYV--DIKRPLYPVIGLDSHCLVTANFGA-KAFAFDM 1170
+YFE+ + E L +P + R ECVA+G+AN F L + PGWD S+G H DDG +H T+G GD VGCG+ Y G+ +F+T NGR+LG AF D+ R YPV+G+D++CLV NFG + F FD+
Sbjct: 388 SYFEVRILEAPRRLNEPTTLDAFRNHNLTANGITASECVAVGIANAAFTLHARMPGWDPHSYGYHGDDGGIFHASGHMVKTYGPTYGVGDVVGCGIDYVHGV----------------------------VFYTLNGRYLGQAFVLSPDDLHRDWYPVVGMDTNCLVQCNFGVHEPFLFDL 540
BLAST of mRNA_L-elsbetiae_contig5406.13634.1 vs. uniprot
Match: D7FKB4_ECTSI (B30.2/SPRY domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKB4_ECTSI) HSP 1 Score: 104 bits (260), Expect = 1.660e-19 Identity = 65/172 (37.79%), Postives = 87/172 (50.58%), Query Frame = 1
Query: 670 AYFEITLEETVAP-LEKPREDEKLRMECVAIGLANDRFRLKGKQPGWDGRSWGMHSDDGLFYHDFQTSGSLDSFTFGPGDTVGCGLLYPRGLQHFDRRRVSDRTSAVPARKDYCGGGQGA-IFFTKNGRFL-GIAFRYVDIKRPLYPVIGLDSHCLVTANFGAKAFAFDMPA 1176
+YFE+T+ +AP L+ P +C+A+G++ RF LKGK PGWD RS+G HSDDG +HD + +FG GD VGCGL DY GG A IFFT NG L G + + ++ YP +G+DS C V N G + F D+ A
Sbjct: 481 SYFEVTI---IAPRLDAPHPIP----DCIAVGVSESRFPLKGKMPGWDSRSYGYHSDDGGAFHDAGSMLFKCGPSFGAGDVVGCGL-------------------------DYSVGGDAADIFFTLNGELLNGGSAAFRGVRGTFYPTVGVDSACPVRINLGEEPFRLDLAA 620
BLAST of mRNA_L-elsbetiae_contig5406.13634.1 vs. uniprot
Match: A0A7S2TPV5_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TPV5_9EUKA) HSP 1 Score: 97.4 bits (241), Expect = 2.070e-17 Identity = 64/166 (38.55%), Postives = 77/166 (46.39%), Query Frame = 1
Query: 670 AYFEITLEETVAPLEKPREDEKLRMECVAIGLANDRFRLKGKQPGWDGRSWGMHSDDGLFYHDFQTSGSLDSFTFGPGDTVGCGLLYPRGLQHFDRRRVSDRTSAVPARKDYCGGGQGAIFFTKNGRFLGIAFRYVDIKRPLYPVIGLDSHCLVTANFG-AKAFAF 1164
AY+EI ++ +P + E C+AIGLA F L GKQPGWD S+G H DDG +H G FGPGD VGCGL Y R +IFFTKNG LG AF + YPV+G+D+ T NFG K F F
Sbjct: 311 AYYEIEID-------RPTKLEPFDGNCIAIGLARAEFPLTGKQPGWDSCSYGYHGDDGNIFHS-SGMGIHYGQPFGPGDVVGCGLDY------LTR----------------------SIFFTKNGAVLGTAFERIP-PGSYYPVVGVDTRAPFTINFGLTKPFVF 439
BLAST of mRNA_L-elsbetiae_contig5406.13634.1 vs. uniprot
Match: A0A7S4EBZ3_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EBZ3_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 5.160e-15 Identity = 62/170 (36.47%), Postives = 78/170 (45.88%), Query Frame = 1
Query: 670 AYFEITLEE--TVAPLEKPREDEKLRMECVAIGLANDRFRLKGKQPGWDGRSWGMHSDDGLFYHDFQTSGSLDSFTFGPGDTVGCGLLYPRGLQHFDRRRVSDRTSAVPARKDYCGGGQGAIFFTKNGRF-----LGIAFRYVDIKRPLYPVIGLDSHCL-VTANFGAKA 1155
AYFE+++ T P P CVA+G+ F+L+GKQPGW SW H DDG YH SG FG GD VGCGL R +D A++F R LG+A+ +D PLY V+G+DS L VT NFGA+A
Sbjct: 265 AYFEVSIASGRTRVPGVTP---------CVAVGVCQRAFKLRGKQPGWTRSSWAYHGDDGNAYHGSGVSGVRYGPRFGAGDVVGCGLC-----------RANDENLL-------------AVYFVLTRRDKAPQPLGVAY-LIDGAGPLYAVVGMDSPALSVTVNFGAEA 400 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5406.13634.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5406.13634.1 >prot_L-elsbetiae_contig5406.13634.1 ID=prot_L-elsbetiae_contig5406.13634.1|Name=mRNA_L-elsbetiae_contig5406.13634.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=562bp MVGAWPTSIDDSFRMQGGTRLQACVDGVVQPFDLAPKIGGSSGSSGNNNGback to top mRNA from alignment at L-elsbetiae_contig5406:1800..9613+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5406.13634.1 ID=mRNA_L-elsbetiae_contig5406.13634.1|Name=mRNA_L-elsbetiae_contig5406.13634.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7814bp|location=Sequence derived from alignment at L-elsbetiae_contig5406:1800..9613+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5406:1800..9613+ >mRNA_L-elsbetiae_contig5406.13634.1 ID=mRNA_L-elsbetiae_contig5406.13634.1|Name=mRNA_L-elsbetiae_contig5406.13634.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3372bp|location=Sequence derived from alignment at L-elsbetiae_contig5406:1800..9613+ (Laminarionema elsbetiae ELsaHSoW15)back to top |