prot_L-elsbetiae_contig540.13627.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig540.13627.1
Unique Nameprot_L-elsbetiae_contig540.13627.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length261
Homology
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BLAST of mRNA_L-elsbetiae_contig540.13627.1 vs. uniprot
Match: D8LJ34_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ34_ECTSI)

HSP 1 Score: 162 bits (411), Expect = 6.700e-42
Identity = 108/216 (50.00%), Postives = 129/216 (59.72%), Query Frame = 0 
Query:    7 RAPVSAIIGLKSTSDGAPGRG-------------EDTSVASTSGLRVP------SHGHFLPSMQSHDLLPRGG---SAGFSIGYSAMFENNMAPSSSAGENGPSRGEGSGSLARTGSVAPFVPQRSNLTPAEEQAHFIMLPD-CAGEGXXXXXXXXXXXXKQLTVFSEKKTLLGSYEEKYDVGQQTHLPFQELEGNFSESAKHGLEASLRAALDEE 199
            R P S I+GLK+  +GA G G              D    + + + VP        GH+LP +QSH+LL  G    S G SIG+  MF+N M P+SS G  G SR      L RTGSVAPFVP + +LTPAEE+A +IMLP+  AGEG            KQLTVFSEK  LLG Y+EKYDVGQQTHLPFQ +E NFS +AK  LEA LRAA+D E
Sbjct:  594 RGPASVILGLKNAPEGASGEGGPGGSLIRESPPGRDREDGNGNVVSVPLSSMRDQSGHYLPPVQSHELLRAGSGGMSRGLSIGFGGMFDNGMVPTSSGG--GSSRDGEKEGLPRTGSVAPFVP-KDDLTPAEERAQYIMLPEGAAGEGGGGGS-------KQLTVFSEKGLLLGFYDEKYDVGQQTHLPFQGVENNFSSNAKRALEAKLRAAIDSE 799
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig540.13627.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LJ34_ECTSI6.700e-4250.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig540contigL-elsbetiae_contig540:30110..32688 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig540.13627.1mRNA_L-elsbetiae_contig540.13627.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig540 30107..33286 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig540.13627.1 ID=prot_L-elsbetiae_contig540.13627.1|Name=mRNA_L-elsbetiae_contig540.13627.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=261bp
METGLSRAPVSAIIGLKSTSDGAPGRGEDTSVASTSGLRVPSHGHFLPSM
QSHDLLPRGGSAGFSIGYSAMFENNMAPSSSAGENGPSRGEGSGSLARTG
SVAPFVPQRSNLTPAEEQAHFIMLPDCAGEGGGGGGGRSSSSSKQLTVFS
EKKTLLGSYEEKYDVGQQTHLPFQELEGNFSESAKHGLEASLRAALDEES
SKMNGGGNTAAAAAAARPRWMALTPTTAAAAVVSTAALSPRSAAGRRGPP
RRWRQQQRWA*
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