prot_L-elsbetiae_contig540.13625.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig540.13625.1
Unique Nameprot_L-elsbetiae_contig540.13625.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length264
Homology
BLAST of mRNA_L-elsbetiae_contig540.13625.1 vs. uniprot
Match: D8LI57_ECTSI (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI57_ECTSI)

HSP 1 Score: 254 bits (649), Expect = 1.170e-73
Identity = 180/288 (62.50%), Postives = 199/288 (69.10%), Query Frame = 0
Query:    3 VEVVEVVGRGKSGFDRFCIRAMEA---STAPAGS-GATAQSVRRQWVAWRRLTEFVALRAALMKAGCSAAEGSDRDTTRMWALPPVVPFGLLMQRLEAWLRRLLRDAQSASREELRRFLLDAPRPTSTDRAAAAAAPPSG------AFPASQGPSAATAADTAG----------------ARRRTAPTLLSTVHEPLSPISAGRAVGLGVGGMAWQDEEGSXXXXXXXXXXXXXXXXXXXXXXAEAREIPSLRPEIKSMFQDPGECHALRIPQREHNQWLRRANRTSA 264
            VEVV VVGRGKSGFDRFC+R +E    S   AG  GATA + RR+WVAWRRLTEFVALR +LM+AGC AAEG DRDT RMW LPP VPFGLLMQRLEAWLRRLLRD ++  REELRRFLLDAPR T+ +                 + PA Q P+ AT A                    +RRRTAPT+LSTVHEPLSPISA                   XXXXXXXXXXXXXXXXXXXXX AEAR IPSLRPE+K+MF+DPGECHALR+P+ EHNQWLRRANR SA
Sbjct:  502 VEVVRVVGRGKSGFDRFCVRVVEVASQSQRQAGVVGATAPTSRREWVAWRRLTEFVALRVSLMEAGCPAAEGGDRDT-RMWQLPPAVPFGLLMQRLEAWLRRLLRDPEAVKREELRRFLLDAPRTTTAENXXXXXXXXXXXXXXXXSLPACQDPAIATNAXXXXXXXXXXXXXXXXXXXXSRRRTAPTVLSTVHEPLSPISAA---------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAEARVIPSLRPELKTMFRDPGECHALRVPKHEHNQWLRRANRASA 779          
BLAST of mRNA_L-elsbetiae_contig540.13625.1 vs. uniprot
Match: A0A6H5JPN1_9PHAE (CRAL-TRIO domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPN1_9PHAE)

HSP 1 Score: 167 bits (423), Expect = 2.080e-43
Identity = 129/299 (43.14%), Postives = 148/299 (49.50%), Query Frame = 0
Query:    3 VEVVEVVGRGKSGFDRFCIRAME-ASTAPAGSGATAQSV---RRQWVAWRRLTEFVALRAALMKAGCSAAEGSDRDTTRMWALPPVVPFGLLMQRLEAWLRRLLRDAQSASREELRRFLLDAPRPTSTDRAAAAAAPP------SGAFPASQGPSAATAADTAGARRRTAPTLLSTVHEPLSPISAGRAVGLG---------------------------VGGMAWQDEEGSXXXXXXXXXXXXXXXXXXXXXXAEAREIPSLRPEIKSMFQDPGECHALRIPQREHNQWLRRANRTSA 264
            VEVV VVGRGKSGFDRFC+R +E AS + + S    +S    +++ V  R L      R +LM+AGC AAEG DRDT RMW LPPVVPFGLLMQRLE WLRRLLRD      E LRRFLLDAPR T+    A            S   PA   P+ AT A   GA                                                        GG   ++E G                       AEAR IPSLRPE+K+MF+DPGECHALR+P+ EHNQWLRRANR SA
Sbjct:  338 VEVVRVVGRGKSGFDRFCVRVVEVASRSRSRSQRATESDDGRKKKEVTHRFLACLPTKRVSLMEAGCLAAEGGDRDT-RMWQLPPVVPFGLLMQRLETWLRRLLRDP-----EALRRFLLDAPRTTTAANVAXXXXXXXXXXXASNVLPACHDPAIATNAAWTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGLLCPEAGGGPAEEEVGEGGS-------------------AEARVIPSLRPELKTMFRDPGECHALRVPKHEHNQWLRRANRASA 611          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig540.13625.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LI57_ECTSI1.170e-7362.50CRAL-TRIO domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JPN1_9PHAE2.080e-4343.14CRAL-TRIO domain-containing protein (Fragment) n=1... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 91..111
IPR036871PX domain superfamilySUPERFAMILY64268PX domaincoord: 16..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig540contigL-elsbetiae_contig540:17166..20816 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig540.13625.1mRNA_L-elsbetiae_contig540.13625.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig540 17166..20816 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig540.13625.1 ID=prot_L-elsbetiae_contig540.13625.1|Name=mRNA_L-elsbetiae_contig540.13625.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=264bp
MAVEVVEVVGRGKSGFDRFCIRAMEASTAPAGSGATAQSVRRQWVAWRRL
TEFVALRAALMKAGCSAAEGSDRDTTRMWALPPVVPFGLLMQRLEAWLRR
LLRDAQSASREELRRFLLDAPRPTSTDRAAAAAAPPSGAFPASQGPSAAT
AADTAGARRRTAPTLLSTVHEPLSPISAGRAVGLGVGGMAWQDEEGSGGA
AAAAAAAEKAGGGDGGGGGAEAREIPSLRPEIKSMFQDPGECHALRIPQR
EHNQWLRRANRTSA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036871PX_dom_sf