mRNA_L-elsbetiae_contig540.13623.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig540.13623.1 vs. uniprot
Match: D8LI57_ECTSI (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI57_ECTSI) HSP 1 Score: 267 bits (683), Expect = 2.960e-78 Identity = 137/185 (74.05%), Postives = 155/185 (83.78%), Query Frame = 1 Query: 4 GLVCLGPGLDRMGRPLVFVRLGGLADSLVEACGKKPLLRFFVWTVERVLERVAVSMLSTQFIIEGSAIVCDARGWSLESTSDGVLAVLQDAANIGLARYPERLGQLFLVNVPP-DQAVG---------VLIAARALGLGQAIDSGKLRVLPGELPKWAPELRKAISPEHLPVEYGGTAPALPPLP 528 GLVCLG G DR+GRPLV VRLGGL SLVEACGKK LLR+F+W+VERVLERVA SMLSTQFIIEGS +VCDARGW ++ SD VL++LQDAA IGL+RYPERLGQLF+VNVP D+A G +++AARALGLG A+++GKLRVLPGELPKWAPEL KAI PEHLPVEYGGTAPALP P Sbjct: 117 GLVCLGSGFDRLGRPLVVVRLGGLTHSLVEACGKKALLRYFIWSVERVLERVASSMLSTQFIIEGSTVVCDARGWDQDNASDSVLSLLQDAAAIGLSRYPERLGQLFVVNVPAADRASGGSXXXXXXXLMLAARALGLGAALEAGKLRVLPGELPKWAPELLKAIPPEHLPVEYGGTAPALPRWP 301
BLAST of mRNA_L-elsbetiae_contig540.13623.1 vs. uniprot
Match: A0A6H5JPN1_9PHAE (CRAL-TRIO domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPN1_9PHAE) HSP 1 Score: 143 bits (361), Expect = 3.710e-35 Identity = 76/103 (73.79%), Postives = 85/103 (82.52%), Query Frame = 1 Query: 244 SDGVLAVLQDAANIGLARYPERLGQLFLVNVPP-DQAVG-------VLIAARALGLGQAIDSGKLRVLPGELPKWAPELRKAISPEHLPVEYGGTAPALPPLP 528 SD VL++LQDAA IGL+RYPERLGQLF+VNVP D A G +++AARALGLG A+D+GKLRVLPGELPKWAPEL KAI PEHLPVEYGGTAPALP P Sbjct: 35 SDSVLSLLQDAAAIGLSRYPERLGQLFVVNVPAADHACGGCGSGGGLMLAARALGLGAALDAGKLRVLPGELPKWAPELLKAIPPEHLPVEYGGTAPALPRWP 137
BLAST of mRNA_L-elsbetiae_contig540.13623.1 vs. uniprot
Match: A0A7S1UE19_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UE19_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 2.030e-13 Identity = 55/168 (32.74%), Postives = 81/168 (48.21%), Query Frame = 1 Query: 25 GLDRMGRPLVFVRLGGLAD-SLVEACGKKPLLRFFVWTVERVLERVAVSMLSTQFIIEGSAIVCDARGWSLESTSDGVLAVLQDAANIGLARYPERLGQLFLVNVPPDQAVGVLIAARALGLGQAIDSGKLRVLPGELPKWAPELRKAISPEHLPVEYGGTAPALPPL 525 G DR RP++ + G +L+E + LLR+ VW ++ +E + IE IV D +G +L + L ++Q A I +PERLG LF+VNVP V ++ K+++ WAPEL + + PE LP +YGGT P LPP Sbjct: 126 GFDRQHRPILLKQYGPFEIWNLLEQTTMEQLLRYHVWWQQKGVEIMKYKGQREGCPIETYTIVLDVQGMALTQVTRDFLRLVQQIAAIDQNEFPERLGTLFIVNVP---RVFPMVWRGVRPFLDPDTESKIKIF-SRKEDWAPELIELVEPEMLPEQYGGTGPPLPPF 289
BLAST of mRNA_L-elsbetiae_contig540.13623.1 vs. uniprot
Match: A0A6U4K456_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4K456_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 2.430e-13 Identity = 55/168 (32.74%), Postives = 81/168 (48.21%), Query Frame = 1 Query: 25 GLDRMGRPLVFVRLGGLAD-SLVEACGKKPLLRFFVWTVERVLERVAVSMLSTQFIIEGSAIVCDARGWSLESTSDGVLAVLQDAANIGLARYPERLGQLFLVNVPPDQAVGVLIAARALGLGQAIDSGKLRVLPGELPKWAPELRKAISPEHLPVEYGGTAPALPPL 525 G DR RP++ + G +L+E + LLR+ VW ++ +E + IE IV D +G +L + L ++Q A I +PERLG LF+VNVP V ++ K+++ WAPEL + + PE LP +YGGT P LPP Sbjct: 126 GFDRQHRPILLKQYGPFEIWNLLEQTTMEQLLRYHVWWQQKGVEIMKYKGQREGCPIETYTIVLDVQGMALTQVTRDFLRLVQQIAAIDQNEFPERLGTLFIVNVP---RVFPMVWRGVRPFLDPDTESKIKIF-SRKEDWAPELIELVEPEMLPEQYGGTGPPLPPF 289
BLAST of mRNA_L-elsbetiae_contig540.13623.1 vs. uniprot
Match: A0A6U4K475_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4K475_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 2.520e-13 Identity = 55/168 (32.74%), Postives = 81/168 (48.21%), Query Frame = 1 Query: 25 GLDRMGRPLVFVRLGGLAD-SLVEACGKKPLLRFFVWTVERVLERVAVSMLSTQFIIEGSAIVCDARGWSLESTSDGVLAVLQDAANIGLARYPERLGQLFLVNVPPDQAVGVLIAARALGLGQAIDSGKLRVLPGELPKWAPELRKAISPEHLPVEYGGTAPALPPL 525 G DR RP++ + G +L+E + LLR+ VW ++ +E + IE IV D +G +L + L ++Q A I +PERLG LF+VNVP V ++ K+++ WAPEL + + PE LP +YGGT P LPP Sbjct: 126 GFDRQHRPILLKQYGPFEIWNLLEQTTMEQLLRYHVWWQQKGVEIMKYKGQREGCPIETYTIVLDVQGMALTQVTRDFLRLVQQIAAIDQNEFPERLGTLFIVNVP---RVFPMVWRGVRPFLDPDTESKIKIF-SRKEDWAPELIELVEPEMLPEQYGGTGPPLPPF 289
BLAST of mRNA_L-elsbetiae_contig540.13623.1 vs. uniprot
Match: A0A7S1XZQ4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XZQ4_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 5.670e-12 Identity = 50/161 (31.06%), Postives = 76/161 (47.20%), Query Frame = 1 Query: 25 GLDRMGRPLVFVRLGGLAD-SLVEACGKKPLLRFFVWTVERVLERVAVSMLSTQFIIEGSAIVCDARGWSLESTSDGVLAVLQDAANIGLARYPERLGQLFLVNVPPDQAVGVLIAARALGLGQAIDSGKLRVLPGELPKWAPELRKAISPEHLPVEYGGT 504 G DR G+ L+F G ++E + LLR VW ER L + +T +E V DA GW L + + ++ A I YPERLG++F++N+P + R L + K+++L E +W P L+ I E +P +YGGT Sbjct: 140 GHDREGQSLMFRHYGKFEIWKILEHTTMENLLRLHVWENERALRAMRRRAAATGTSVESFCAVIDAEGWRLGLATSDAMRYIKGMATIDSDHYPERLGRMFIINLPSVIGASWRVIKRCLA---PRTTDKIQLL-AERSEWEPVLKHYIDDEFIPRQYGGT 296
BLAST of mRNA_L-elsbetiae_contig540.13623.1 vs. uniprot
Match: A0A482SYZ6_9ARCH (CRAL-TRIO domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SYZ6_9ARCH) HSP 1 Score: 73.6 bits (179), Expect = 1.870e-11 Identity = 44/163 (26.99%), Postives = 78/163 (47.85%), Query Frame = 1 Query: 25 GLDRMGRPLVFVRLGGLAD-SLVEACGKKPLLRFFVWTVERVLERVAVSMLSTQFIIEGSAIVCDARGWSLESTSDGVLAVLQDAANIGLARYPERLGQLFLVNVPPDQAVGVLIAARALGLGQAIDSGKLRVLPGELPKWAPELRKAISPEHLPVEYGGTAP 510 G+D+ RP+ + + G ++++ + L+RF W E+ L + + + IE +V DA GW L + A +++ A YPERLG + ++N P +V + G + K+R+L + +W P L++ I +P +YGG AP Sbjct: 121 GVDKQLRPVSYRKFGKFEIWNVLKLTSMERLVRFHAWETEQALRGMYKGSQESGYNIETFVLVIDAAGWGLRLATSDAYAFIKNMATTDSDHYPERLGNMLIINAPTVLSVAWKVVQ---GFLDPVTKKKVRIL-AKRSEWEPMLKQYIDVSQIPQQYGGEAP 279
BLAST of mRNA_L-elsbetiae_contig540.13623.1 vs. uniprot
Match: A0A6H5JL26_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL26_9PHAE) HSP 1 Score: 67.0 bits (162), Expect = 5.210e-9 Identity = 32/39 (82.05%), Postives = 33/39 (84.62%), Query Frame = 1 Query: 4 GLVCLGPGLDRMGRPLVFVRLGGLADSLVEACGKKPLLR 120 GLVCLG G DR+GRPLV VRLGGL SLVEACGKK LLR Sbjct: 476 GLVCLGSGFDRLGRPLVVVRLGGLTHSLVEACGKKALLR 514
BLAST of mRNA_L-elsbetiae_contig540.13623.1 vs. uniprot
Match: A0A7S1DS59_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DS59_HEMAN) HSP 1 Score: 60.5 bits (145), Expect = 6.720e-7 Identity = 49/171 (28.65%), Postives = 79/171 (46.20%), Query Frame = 1 Query: 25 GLDRMGRPLVFVRLGGLADSLVEACGK--KPLLRFFVWTVERVLERVAVSMLSTQFIIEGSAIVCDARGWSLESTSDGVLAVLQDAANIGLARYPERLGQLFLVNVPPDQAVGVLIAARALGLGQAIDSGKLRVLPGELPKWAPELRKAISPEHLPVEYGGTAPALPPLPA 531 G D+ GRP+++ G + A G + LL + V+ E+ + +A IE V DA+GW L + +A ++ A+I A YPERLGQ++++N P + + + S K+++L G +W L + + L YGG AP PP A Sbjct: 96 GFDKQGRPVLYSAYGNCEVDTLCAKGSSVEKLLMYHVFQQEQCVGLLASQSELLNRRIETFFFVVDAKGWGLRLWTRKAMAFIKGMADIDGAHYPERLGQMYVINCPRALVWTYRVITSWV---DPVTSQKIQLLGGPS-EWQHLLTQHVDASQLCSVYGGNAP--PPFDA 260
BLAST of mRNA_L-elsbetiae_contig540.13623.1 vs. uniprot
Match: UPI001E2719C6 (SEC14-like protein 4 isoform X4 n=1 Tax=Pipistrellus kuhlii TaxID=59472 RepID=UPI001E2719C6) HSP 1 Score: 58.9 bits (141), Expect = 2.150e-6 Identity = 54/165 (32.73%), Postives = 75/165 (45.45%), Query Frame = 1 Query: 25 GLDRMGRPLVFVRLGGL-ADSLVEACGKKPLLRFFVWTVERVLERVAVSMLSTQFIIEGSAIVCDARGWSLESTSDGVLAVLQDAANIGLARYPERLGQLFLVNVPPDQAVGVLIAARALGLGQAIDSGKLR----VLPGELPKWAPELRKAISPEHLPVEYGGT 504 G D G P+ F +GGL L+ + K+ L+R + ER+L+ + IE +V D G SL+ + V Q +I A YPE L L +V P V A L ++ S + R +L G W EL K ISP+ LPVE+GGT Sbjct: 90 GYDYEGCPVWFDIIGGLDPKGLLLSASKQELIRKRIKVCERLLQECELQSQKLGRKIETVLMVFDLEGLSLKHLWKPAVEVYQQFFSIIEANYPETLKNLIIVRAPKLFPV-------AFNLVKSFMSEETRRKIVILGGN---WKQELPKFISPDQLPVEFGGT 244 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig540.13623.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig540.13623.1 >prot_L-elsbetiae_contig540.13623.1 ID=prot_L-elsbetiae_contig540.13623.1|Name=mRNA_L-elsbetiae_contig540.13623.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=262bp AGLVCLGPGLDRMGRPLVFVRLGGLADSLVEACGKKPLLRFFVWTVERVLback to top mRNA from alignment at L-elsbetiae_contig540:14690..16715+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig540.13623.1 ID=mRNA_L-elsbetiae_contig540.13623.1|Name=mRNA_L-elsbetiae_contig540.13623.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2026bp|location=Sequence derived from alignment at L-elsbetiae_contig540:14690..16715+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig540:14690..16715+ >mRNA_L-elsbetiae_contig540.13623.1 ID=mRNA_L-elsbetiae_contig540.13623.1|Name=mRNA_L-elsbetiae_contig540.13623.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1572bp|location=Sequence derived from alignment at L-elsbetiae_contig540:14690..16715+ (Laminarionema elsbetiae ELsaHSoW15)back to top |