prot_L-elsbetiae_contig540.13622.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig540.13622.1
Unique Nameprot_L-elsbetiae_contig540.13622.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length101
Homology
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BLAST of mRNA_L-elsbetiae_contig540.13622.1 vs. uniprot
Match: D8LI57_ECTSI (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI57_ECTSI)

HSP 1 Score: 165 bits (418), Expect = 2.440e-45
Identity = 87/97 (89.69%), Postives = 88/97 (90.72%), Query Frame = 0 
Query:    1 MPPTP-FHPDDGSSKKTGRLGRLTKREAVSLASLKVLARKQGLSLGLVRGPGEQNDVCLLRFLRAQGFEEKRALASLVSCVEWGAGVGLSGLRGHPG 96
            MP TP FHP + SSK TGRLGRLTKREA SLASLK LARKQGLSLGLVRGPGEQNDVCLLRFLRAQ FEEKRALASLVSCVEWGA VGLSGLRGHPG
Sbjct:    1 MPATPLFHPKNESSKGTGRLGRLTKREAASLASLKQLARKQGLSLGLVRGPGEQNDVCLLRFLRAQRFEEKRALASLVSCVEWGASVGLSGLRGHPG 97
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BLAST of mRNA_L-elsbetiae_contig540.13622.1 vs. uniprot
Match: A0A6H5JL26_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL26_9PHAE)

HSP 1 Score: 162 bits (409), Expect = 2.500e-45
Identity = 86/97 (88.66%), Postives = 87/97 (89.69%), Query Frame = 0 
Query:    1 MPPTP-FHPDDGSSKKTGRLGRLTKREAVSLASLKVLARKQGLSLGLVRGPGEQNDVCLLRFLRAQGFEEKRALASLVSCVEWGAGVGLSGLRGHPG 96
            MP TP FHP + SSK TGRLGRLTKREA SLASLK LARKQGLSLGLVRGPGEQNDVCLLRFLRAQ FEEKRALASLVSCVEWGA VGLSGLRGH G
Sbjct:  360 MPATPLFHPHNESSKGTGRLGRLTKREAASLASLKQLARKQGLSLGLVRGPGEQNDVCLLRFLRAQRFEEKRALASLVSCVEWGASVGLSGLRGHHG 456
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BLAST of mRNA_L-elsbetiae_contig540.13622.1 vs. uniprot
Match: A0A835Z1B8_9STRA (CRAL-TRIO domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1B8_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 2.090e-17
Identity = 48/93 (51.61%), Postives = 64/93 (68.82%), Query Frame = 0 
Query:    1 MPPTP-FHPDDGSSKKTGRLGRLTKREAVSLASLKVLARKQGLSLGLVRGPGEQNDVCLLRFLRAQGFEEKRALASLVSCVEWGAGVGLSGLR 92
            MPPT  FHP   +  + GRLG LTK+E  +L++ K   +K+ L+L LV GPGEQ D+C+LR+LRA  F+EK+ALA+L +  EW A V L  LR
Sbjct:    1 MPPTLLFHPM--APARPGRLGSLTKKEQAALSACKHAVKKKPLNLWLVGGPGEQEDLCVLRYLRASNFDEKKALAALSASAEWCAAVSLRQLR 91
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig540.13622.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LI57_ECTSI2.440e-4589.69CRAL-TRIO domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JL26_9PHAE2.500e-4588.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z1B8_9STRA2.090e-1751.61CRAL-TRIO domain-containing protein n=1 Tax=Tribon... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.8.20coord: 5..84
e-value: 1.1E-8
score: 37.0
IPR036273CRAL/TRIO, N-terminal domain superfamilySUPERFAMILY46938CRAL/TRIO N-terminal domaincoord: 8..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig540contigL-elsbetiae_contig540:13377..14659 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig540.13622.1mRNA_L-elsbetiae_contig540.13622.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig540 13180..14659 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig540.13622.1 ID=prot_L-elsbetiae_contig540.13622.1|Name=mRNA_L-elsbetiae_contig540.13622.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=101bp
MPPTPFHPDDGSSKKTGRLGRLTKREAVSLASLKVLARKQGLSLGLVRGP
GEQNDVCLLRFLRAQGFEEKRALASLVSCVEWGAGVGLSGLRGHPGVVTD
G
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036273CRAL/TRIO_N_dom_sf