prot_L-elsbetiae_contig540.13628.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig540.13628.1
Unique Nameprot_L-elsbetiae_contig540.13628.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length141
Homology
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BLAST of mRNA_L-elsbetiae_contig540.13628.1 vs. uniprot
Match: D8LJ34_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ34_ECTSI)

HSP 1 Score: 52.0 bits (123), Expect = 5.730e-5
Identity = 24/37 (64.86%), Postives = 30/37 (81.08%), Query Frame = 0 
Query:  104 RQVFYDWFSDAVCEAMDMSVFESEKTDGKAPAKTSPR 140
            RQVFYDW   ++   MDM+VF+S+KTDGKAP +TSPR
Sbjct:  893 RQVFYDW---SLGPQMDMNVFDSDKTDGKAPIRTSPR 926
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig540.13628.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LJ34_ECTSI5.730e-564.86Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig540contigL-elsbetiae_contig540:32891..33313 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig540.13628.1mRNA_L-elsbetiae_contig540.13628.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig540 32891..33313 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig540.13628.1 ID=prot_L-elsbetiae_contig540.13628.1|Name=mRNA_L-elsbetiae_contig540.13628.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=141bp
VVFGSLAHSRGRLLGCGRFGIHVCMSCSSSEGVCRDALRPGVFPPVCRVS
RRVHAKAAESSGQSRSDSAFHLGRYLCAANDRSAAGKQRTMISLNHSAMF
RCCRQVFYDWFSDAVCEAMDMSVFESEKTDGKAPAKTSPR*
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