prot_L-elsbetiae_contig5399.13610.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5399.13610.1
Unique Nameprot_L-elsbetiae_contig5399.13610.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length196
Homology
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BLAST of mRNA_L-elsbetiae_contig5399.13610.1 vs. uniprot
Match: A0A6H5KAC9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAC9_9PHAE)

HSP 1 Score: 100 bits (248), Expect = 5.700e-21
Identity = 83/211 (39.34%), Postives = 110/211 (52.13%), Query Frame = 0 
Query:    1 NGAVGRGAGWHGLMLYRPPGISQKSPVFQQALQLAAIAFSPDVRHPPVAATPVLPCHEPTPNRVSKSSRLKPPLTPTATFDGLSQSSSGRGSISCARRQRD-------PARLVGCKKERSGSPHKSPPQLFSDF-TFAGTTGGEGEEEIAGVEPSSDVCCAP-------VAKSLTPAGPLKKTTSVDGTISMTPASLHASLQPARLFDSGD 196
            N A GR  GWHGL LYR PG+ Q+S VFQQALQL  IAFSPDV+ PP +  P  PC     +R+  +S ++P   P   F    QS+S R +++C  ++R        P R  G +K R+    K  P+ + +  + A T   E E+E             P       V KS TP+ P   TT  DG+IS+TPA LH +   + LFDSGD
Sbjct:  300 NDAAGRVRGWHGLTLYRSPGVDQRSAVFQQALQLETIAFSPDVQTPPRSTPPESPCRGLGSSRMYDASSVRP--QPATAFCHR-QSASCR-ALACRDQERIGLGMSSLPERGAGRQKRRTDIASKPRPRPWDELESLARTPRVETEQEQQVRVVGGTYFATPPELHRYGVVKS-TPSPPQFTTTKPDGSISVTPAPLHVASAASTLFDSGD 505
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5399.13610.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KAC9_9PHAE5.700e-2139.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5399contigL-elsbetiae_contig5399:6743..7538 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5399.13610.1mRNA_L-elsbetiae_contig5399.13610.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5399 6743..7538 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5399.13610.1 ID=prot_L-elsbetiae_contig5399.13610.1|Name=mRNA_L-elsbetiae_contig5399.13610.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=196bp
NGAVGRGAGWHGLMLYRPPGISQKSPVFQQALQLAAIAFSPDVRHPPVAA
TPVLPCHEPTPNRVSKSSRLKPPLTPTATFDGLSQSSSGRGSISCARRQR
DPARLVGCKKERSGSPHKSPPQLFSDFTFAGTTGGEGEEEIAGVEPSSDV
CCAPVAKSLTPAGPLKKTTSVDGTISMTPASLHASLQPARLFDSGD
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