prot_L-elsbetiae_contig5399.13609.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5399.13609.1
Unique Nameprot_L-elsbetiae_contig5399.13609.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length220
Homology
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BLAST of mRNA_L-elsbetiae_contig5399.13609.1 vs. uniprot
Match: D7FTD2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTD2_ECTSI)

HSP 1 Score: 77.8 bits (190), Expect = 2.200e-13
Identity = 49/84 (58.33%), Postives = 60/84 (71.43%), Query Frame = 0 
Query:    1 AKARKNELATRIQRQYRRHVEQVVIVKALAAMRISREMREARAKEVERRFRALEEERLLGGTGIGETVVTPLEARRAARANQRL 84
            A  RK+ L TRIQRQYRRH E++VI+ AL A       +E RA+EVERRFRALEE+RL G T   E + TPL+ RRA RA++RL
Sbjct:  139 AAERKHALVTRIQRQYRRHRERMVILTALLAXXXXXXXKEERAREVERRFRALEEQRL-GNTSGSEAIATPLDKRRAERAHKRL 221
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5399.13609.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FTD2_ECTSI2.200e-1358.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 36..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5399contigL-elsbetiae_contig5399:4524..6232 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5399.13609.1mRNA_L-elsbetiae_contig5399.13609.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5399 4524..6234 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5399.13609.1 ID=prot_L-elsbetiae_contig5399.13609.1|Name=mRNA_L-elsbetiae_contig5399.13609.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=220bp
AKARKNELATRIQRQYRRHVEQVVIVKALAAMRISREMREARAKEVERRF
RALEEERLLGGTGIGETVVTPLEARRAARANQRLHKRMQAKGSSVIRASK
WRLRQQFGRSQAQASIPAEAPASTPALVVSVPSPPMATPPASRGGNEVSC
GSCLPAAEPEHVGETIPVDFDGAAVLRPSTGAANLPAEAAHQQHLLPSFS
PADLLGPVGGELVPTSDCRA
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