prot_L-elsbetiae_contig5398.13608.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5398.13608.1
Unique Nameprot_L-elsbetiae_contig5398.13608.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length80
Homology
BLAST of mRNA_L-elsbetiae_contig5398.13608.1 vs. uniprot
Match: Q9SMD6_9PHAE (Carbonic anhydrase alpha type (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q9SMD6_9PHAE)

HSP 1 Score: 103 bits (258), Expect = 9.510e-27
Identity = 44/74 (59.46%), Postives = 61/74 (82.43%), Query Frame = 0
Query:    2 VHVKDGTDSELPVVGIMYETSEYGDNLEIANLWNVLDMSEATTDEVFATAVYDLVPAGMSFSHYIRSLTTPPCT 75
            VHVK GTD +L V+G++++T++YG N+EI +LW+VLD+ + TTDEVF T VYD++P+   FSHY+ SLTTPPCT
Sbjct:   14 VHVKAGTDDQLLVIGVLFDTTQYGSNVEIEHLWDVLDIGKPTTDEVFVTRVYDIMPSNPVFSHYMGSLTTPPCT 87          
BLAST of mRNA_L-elsbetiae_contig5398.13608.1 vs. uniprot
Match: F6MHT6_SACJA (Carbonic anhydrase n=1 Tax=Saccharina japonica TaxID=88149 RepID=F6MHT6_SACJA)

HSP 1 Score: 103 bits (256), Expect = 5.500e-25
Identity = 43/74 (58.11%), Postives = 61/74 (82.43%), Query Frame = 0
Query:    2 VHVKDGTDSELPVVGIMYETSEYGDNLEIANLWNVLDMSEATTDEVFATAVYDLVPAGMSFSHYIRSLTTPPCT 75
            VHVK+GT+ +L VVG++++T++YG N+EI +LW+VLD+ E TT EVF T +YD++P+   FSHY+ SLTTPPCT
Sbjct:  160 VHVKEGTEDQLLVVGVLFDTTDYGSNVEIEHLWDVLDIGETTTKEVFTTRIYDIMPSNPVFSHYMGSLTTPPCT 233          
BLAST of mRNA_L-elsbetiae_contig5398.13608.1 vs. uniprot
Match: D8LB10_ECTSI (Carbonic anhydrase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB10_ECTSI)

HSP 1 Score: 84.3 bits (207), Expect = 8.800e-18
Identity = 38/75 (50.67%), Postives = 52/75 (69.33%), Query Frame = 0
Query:    1 MVHVKDGTDSELPVVGIMYETSEYGDNLEIANLWNVLDMSEATTDEVFATAVYDLVPAGMSFSHYIRSLTTPPCT 75
            +VH+K  T   L VVGIM+E S+YG N+E+  +WNV+D+++   +E F  A Y L+PA  SF+ Y  SLTTPPCT
Sbjct:  164 LVHLKQNTTDGLLVVGIMFEVSDYGQNVELEPMWNVMDLNQDIAEEQFMAAAYSLLPATPSFTTYSGSLTTPPCT 238          
BLAST of mRNA_L-elsbetiae_contig5398.13608.1 vs. uniprot
Match: A0A872YNN4_SACJA (Carbonic anhydrase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A872YNN4_SACJA)

HSP 1 Score: 62.8 bits (151), Expect = 8.590e-10
Identity = 31/78 (39.74%), Postives = 49/78 (62.82%), Query Frame = 0
Query:    1 MVHVKD---GTDSELPVVGIMYETSEYGDNLEIANLWNVLDMSEATTDEVFATAVYDLVPAGMSFSHYIRSLTTPPCT 75
            +VH +D   GT+SEL V+G+  +  E+G N+ +  LW+VL         +     Y+L+P+ M++SHY+ SLTTPPC+
Sbjct:  166 LVHSRDDSDGTESELLVIGVFLDAKEHGWNVALEPLWDVLGSGAKPRGVINP---YELIPSDMAYSHYMGSLTTPPCS 240          
BLAST of mRNA_L-elsbetiae_contig5398.13608.1 vs. uniprot
Match: A0A7S4D4V5_HETAK (Carbonic anhydrase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D4V5_HETAK)

HSP 1 Score: 49.3 bits (116), Expect = 5.160e-5
Identity = 27/72 (37.50%), Postives = 41/72 (56.94%), Query Frame = 0
Query:    9 DSELPVVGIMYETSEYGDNLEIANLWNVLDMSEATTD-EVFATAVYD----LVPAGMSFSHYIRSLTTPPCT 75
            DS L V+G+M++  +YG N      WN      +T D EV  ++  D    ++PA +S+ H+  SLTTPPC+
Sbjct:  158 DSNLLVIGVMFDVVDYGGNNFFKEFWNNTWSDVSTGDSEVSLSSTLDPYTEILPADLSYYHWNGSLTTPPCS 229          
BLAST of mRNA_L-elsbetiae_contig5398.13608.1 vs. uniprot
Match: A0A7S3XPW5_HETAK (Carbonic anhydrase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPW5_HETAK)

HSP 1 Score: 49.3 bits (116), Expect = 5.670e-5
Identity = 27/72 (37.50%), Postives = 41/72 (56.94%), Query Frame = 0
Query:    9 DSELPVVGIMYETSEYGDNLEIANLWNVLDMSEATTD-EVFATAVYD----LVPAGMSFSHYIRSLTTPPCT 75
            DS L V+G+M++  +YG N      WN      +T D EV  ++  D    ++PA +S+ H+  SLTTPPC+
Sbjct:  184 DSNLLVIGVMFDVVDYGGNNFFKEFWNNTWSDVSTGDSEVSLSSTLDPYTEILPADLSYYHWNGSLTTPPCS 255          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5398.13608.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
Q9SMD6_9PHAE9.510e-2759.46Carbonic anhydrase alpha type (Fragment) n=1 Tax=L... [more]
F6MHT6_SACJA5.500e-2558.11Carbonic anhydrase n=1 Tax=Saccharina japonica Tax... [more]
D8LB10_ECTSI8.800e-1850.67Carbonic anhydrase n=2 Tax=Ectocarpus TaxID=2879 R... [more]
A0A872YNN4_SACJA8.590e-1039.74Carbonic anhydrase n=1 Tax=Saccharina japonica Tax... [more]
A0A7S4D4V5_HETAK5.160e-537.50Carbonic anhydrase (Fragment) n=1 Tax=Heterosigma ... [more]
A0A7S3XPW5_HETAK5.670e-537.50Carbonic anhydrase (Fragment) n=1 Tax=Heterosigma ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036398Alpha carbonic anhydrase domain superfamilyGENE3D3.10.200.10coord: 1..77
e-value: 2.2E-9
score: 39.3
IPR036398Alpha carbonic anhydrase domain superfamilySUPERFAMILY51069Carbonic anhydrasecoord: 2..75
IPR001148Alpha carbonic anhydrase domainPFAMPF00194Carb_anhydrasecoord: 9..75
e-value: 1.4E-5
score: 24.8
IPR001148Alpha carbonic anhydrase domainPROSITEPS51144ALPHA_CA_2coord: 1..79
score: 12.386

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5398contigL-elsbetiae_contig5398:2637..3556 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5398.13608.1mRNA_L-elsbetiae_contig5398.13608.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5398 2250..5455 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5398.13608.1 ID=prot_L-elsbetiae_contig5398.13608.1|Name=mRNA_L-elsbetiae_contig5398.13608.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=80bp
MVHVKDGTDSELPVVGIMYETSEYGDNLEIANLWNVLDMSEATTDEVFAT
AVYDLVPAGMSFSHYIRSLTTPPCTCTPG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036398CA_dom_sf
IPR001148CA_dom