mRNA_L-elsbetiae_contig5382.13591.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5382.13591.1
Unique NamemRNA_L-elsbetiae_contig5382.13591.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig5382.13591.1 vs. uniprot
Match: D7FHR8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHR8_ECTSI)

HSP 1 Score: 390 bits (1002), Expect = 1.250e-132
Identity = 191/277 (68.95%), Postives = 229/277 (82.67%), Query Frame = 1
Query:  130 ETAIAVGSADEMGRVVIRSGQRFIKRHPAISLAWVFGLVMSILASGYTPTPEAVQNYEVKMASLNDEVLAEAEAEMLYWDKIYRRSKGMFWTCDAQCTANKQEYEQRRNIYLDLNKDYLKGVAEAKSELGIFSEDGVEETRDLFWRKVSGGKQYAKRATMWDAVFVGMGTMSRRDEGLAAIIARIAFKFVINLTIGLFMAVFQFLFSVWNVIWSYQPDPVSTVAFAAMASLXXXXXXXXXXXXXXXXXXXGVYAVAKLAETAQIEAARQGGGQDPRR 960
            +T+I VG AD+ G +V+ + ++ +KRHP IS++WV GL++S LASGYTP+  A+QNYE KM  L+DE +  A+ EM+YWD IYRRSKGMFWTC+ QCTAN++E+E+RR  YLDLNK YLKG A+AKSELGIFSEDGVEETRDLFWRKVSGGKQ+AKRATMWDA+FVG+GTM+RRDEGLA+I+ARIAF+FV+NLT+GLFMAVFQFLFS+W VIWSYQPDP+ST+AFAAMA+L                   GVY VAKLAETAQIEAARQ  GQDPRR
Sbjct:   10 QTSIVVGGADQFGALVVSNAKQLVKRHPVISVSWVVGLLVSTLASGYTPSTTAMQNYENKMIGLDDESVMRAQGEMVYWDDIYRRSKGMFWTCNEQCTANRKEFERRRKTYLDLNKAYLKGEADAKSELGIFSEDGVEETRDLFWRKVSGGKQFAKRATMWDAMFVGIGTMTRRDEGLASIVARIAFRFVVNLTMGLFMAVFQFLFSMWTVIWSYQPDPLSTLAFAAMAALGAVSMLATWLLGLAAVGVTGVYTVAKLAETAQIEAARQQ-GQDPRR 285          
BLAST of mRNA_L-elsbetiae_contig5382.13591.1 vs. uniprot
Match: A0A835Z0D4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0D4_9STRA)

HSP 1 Score: 179 bits (454), Expect = 5.170e-50
Identity = 97/239 (40.59%), Postives = 143/239 (59.83%), Query Frame = 1
Query:  112 QPQTRHETAIAVGSADEMGRVVIRSGQRFIKRHPAISLAWVFGLVMSILASGYTPTPEAVQNYEVKMASLN--DEVLAEAEAEMLYWDKIYRRSKGMFWTCDAQCTANKQEYEQRRNIYLDLNKDYLKGVAEAKSELGIFSEDGVEETRDLFWRKVSGGKQYAKRATMWDAVFVGMGTMSRRDEGLAAIIARIAFKFVINLTIGLFMAVFQFLFSVWNVIWSYQPDPVSTVAFAAMASL 822
            QP  ++  A+AV   D     V +       RHP ISL+WV GL ++I+A+G+TP P+A++ Y   +  L   +  L +A+ E   W+  Y  SKG FW CD  C  N + + Q R       + Y   +AEAKS LGIFS  GV E RDLFWR+V+GG+++A+R+T++DA+F G+G+M RRD  +A  +  +A + + N++IG   A+  FL+SVW VI ++QP  V  + F   ASL
Sbjct:    2 QPPNQNNGAVAVRLNDLTLTTVAKGAAGVAVRHPVISLSWVAGLFLAIMATGFTPAPQAMEAYSFAVEDLKFYENELLQAQYEYDSWNVEYHESKGWFWQCDDHCQENYKSFVQAREDLRGKQRSYDGKLAEAKSHLGIFSTLGVAEARDLFWRRVAGGREFARRSTLYDAIFAGIGSM-RRDSSMAEYVMTMAVQVLWNMSIGAVGALVTFLWSVWGVIATFQPSAVVALLFFMCASL 239          
BLAST of mRNA_L-elsbetiae_contig5382.13591.1 vs. uniprot
Match: A0A7S0C9V1_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C9V1_9STRA)

HSP 1 Score: 169 bits (428), Expect = 4.100e-46
Identity = 98/282 (34.75%), Postives = 153/282 (54.26%), Query Frame = 1
Query:  139 IAVGSADEMGRVVIRSGQRFIKRHPAISLAWVFGLVMSILA-SGYTPTPEAVQNYEVKMASLNDEVLAEAEAEMLYWDKIYRRSKGMFWTCDAQCTANKQEYEQRRNIYLDLNKDYLKGVAEAKSELGIFSEDGVEETRDLFWRKVSGGKQYAKRATMWDAVFVGMGTMSRRDEGLAAIIARIAFKFVINLTIGLFMAVFQFLFSVWNVIWSYQPDPVSTVAFAAMASLXXXXXXXXXXXXXXXXXXXGVYAVAKLAETAQIEAARQGGGQDPRRRPQFAPH 981
            I + ++ + G + +   + F KR+  I+ +++FGL++ +L  SGY  + E    Y   M++++ +   +A  +    ++ YR +KG F++CD+ C  NK   E  +     +  +    +++AK+  GIFSE GV E +D FW     GKQ+AKR TMWDA+F GM +M R DE +   + ++    +IN ++GL MA+F F+F +W+++ SYQPDP++ VAF   AS                     VY VAKLAE        QGGGQ  RR  Q  PH
Sbjct:   21 IVIPNSSDFGALAVSGVKAFAKRNKVITGSYLFGLIIVVLGGSGYQLSREQSIQYNQIMSTIDLKAEYDASNKYASANQAYRATKGWFFSCDSLCQRNKSRMEHAKRDLGMIRAEGYNRMSDAKASAGIFSEVGVGEVKDSFWEYFQSGKQFAKRQTMWDALFTGMRSMGR-DESMMEYVLKVLMNALINFSLGLIMALFIFIFGLWSIVKSYQPDPLTAVAFFLSASCAAFAFVSTFLFFMYGAAAGSVYGVAKLAEANMRIDNGQGGGQ--RRNMQNRPH 299          
BLAST of mRNA_L-elsbetiae_contig5382.13591.1 vs. uniprot
Match: A0A7S2A693_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A693_TRICV)

HSP 1 Score: 160 bits (404), Expect = 9.360e-43
Identity = 96/272 (35.29%), Postives = 149/272 (54.78%), Query Frame = 1
Query:  127 HETAIAVGSADEMGRVVIRSGQRFIKRHPAISLAWVFGL-VMSILASGYTPTPEAVQNYEVKMASLNDEVLAEAEAEMLYWDKIYRRSKGMFWTCDAQCTANKQEYEQRRNIYLDLNKDYLKGVAEAKSELGIFSEDGVEETRDLFWRKVSGGKQYAKRATMWDAVFVGMGTMSRRDEGLAAIIARIAFKFVINLTIGLFMAVFQFLFSVWNVIWSYQPDPVSTVAFAAMASLXXXXXXXXXXXXXXXXXXXGVYAVAKLAET-AQIEAARQ 936
            H+  +A G  D +G + +R    F KRH  IS ++VFGL V+ ++ SG   T +  + Y+  M++++     +A     +    YR SKG F +CD+ C  NK   E  R    D+  +    +++AK   G+FSE GV E +D FW +   GK++AKR +MWDA+F+GM +M R DE  A    ++  + +IN +IGL MA+F F+F +W ++ SYQPDP++ +AF   A                     G+Y +AK+AET  +IE  R+
Sbjct:    7 HDGQLARGQGD-IGTLALRGAAAFAKRHKVISGSYVFGLLVLLLVGSGTKLTLDQRRQYDHIMSTIDLNAEFDASNRYAHAMHAYRASKGWF-SCDSLCQRNKARMEDARAALEDIRAEGYNRMSDAKRVAGLFSEVGVGEVKDSFWERFHAGKRFAKRQSMWDAMFMGMRSMGR-DESFAEYALKMIVQVLINFSIGLVMALFIFIFGLWGIVRSYQPDPLTALAFFLSAVCAAFAFVTTYLLLIYGATAGGLYGMAKMAETNMRIEQGRR 275          
BLAST of mRNA_L-elsbetiae_contig5382.13591.1 vs. uniprot
Match: A0A7S2WRM9_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WRM9_9STRA)

HSP 1 Score: 158 bits (399), Expect = 5.780e-42
Identity = 89/261 (34.10%), Postives = 140/261 (53.64%), Query Frame = 1
Query:  133 TAIAVGSADEMGRVVIRSGQRFIKRHPAISLAWVFGLVMSILASGYTPTPEAVQNYEVKMASLNDEVLAEAEAEMLYWDKIYRRSKGMFWTCDAQCTANKQEYEQRRNIYLDLNKDYLKGVAEAKSELGIFSEDGVEETRDLFWRKVSGGKQYAKRATMWDAVFVGMGTMSRRDEGLAAIIARIAFKFVINLTIGLFMAVFQFLFSVWNVIWSYQPDPVSTVAFAAMASLXXXXXXXXXXXXXXXXXXXGVYAVAKLAETA 915
            TA    S D++   +IR G  F KRH  ++ A++ G+V+ + A G+  + E  Q YE  ++ ++ + +  A+      +  YR SKG F +CD  C AN +EY+       ++ K++ +  +EAKS +G+FSE GV+E RDLFW + +GGK +AKR++ WD +F+ +G+M R DE L     R     ++N TIGL  A+  F + VW +I SYQP  +    F  +AS+                    VY  AK+A  +
Sbjct:   10 TAETQLSVDDVSTALIRHGVAFAKRHYVMTSAYIVGVVIMLFAGGFAVSMEQEQKYERILSQIDLKRMHRAQVAAQNAEYNYRESKGWF-SCDNHCMANYEEYQLNLARLAEVEKEFAEIQSEAKSVVGVFSEYGVQEVRDLFWSQFAGGKDFAKRSSWWDLIFMSIGSMGR-DESLMEFALRFLMNMLMNFTIGLVGALIGFYWFVWGIITSYQPSVLIAFVFFMLASIAATSCVVSFLLGLYSAAAGSVYVAAKIASNS 268          
BLAST of mRNA_L-elsbetiae_contig5382.13591.1 vs. uniprot
Match: A0A7S1IGG2_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IGG2_9EUGL)

HSP 1 Score: 159 bits (402), Expect = 7.860e-42
Identity = 88/256 (34.38%), Postives = 134/256 (52.34%), Query Frame = 1
Query:  157 DEMGRVVIRSGQRFIKRHPAISLAWVFGLVMSILASGYTPTPEAVQNYEVKMASLNDEVLAEAEAEMLYWDKIYRRSKGMFWTCDAQCTANKQEYEQRRNIYLDLNKDYLKGVAEAKSELGIFSEDGVEETRDLFWRKVSGGKQYAKRATMWDAVFVGMGTMSRRDEGLAAIIARIAFKFVINLTIGLFMAVFQFLFSVWNVIWSYQPDPVSTVAFAAMASLXXXXXXXXXXXXXXXXXXXGVYAVAKLAETAQIE 924
            +++G V++       KR+  ISL WV GL+++  A+G+  + +    YE  M  +N E L  AE        +Y   KG FWTCDA CT  K EYE              + +++AK E+GIFS  GVEETR LFW+    GK +AKR +MWD +F+G+G    RD+GLAA + ++  + ++N T+GL  A   F++S+W V+ S+QP     + F  +AS+                   GV  + K A +  ++
Sbjct:   82 EDLGSVMLSGAVSVAKRNWKISLTWVVGLLLASFATGFAVSEDQRVKYESMMQDINTEPLMAAEDAAYRVRGLYESHKGWFWTCDALCTQYKTEYEAAAKQLEHEQSIVNRQISDAKGEVGIFSTYGVEETRRLFWKSFGQGKDFAKRQSMWDLLFLGVGR--GRDDGLAAYLIKLLLQVLLNFTLGLIGATIGFIWSLWGVVSSFQPGIAERLLFFGLASVAACAFMASWLIGLYTAAAGGVVVLGKAAHSLALQ 335          
BLAST of mRNA_L-elsbetiae_contig5382.13591.1 vs. uniprot
Match: A0A7S1G116_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1G116_9STRA)

HSP 1 Score: 156 bits (395), Expect = 2.230e-41
Identity = 102/297 (34.34%), Postives = 161/297 (54.21%), Query Frame = 1
Query:   97 MSSRRQPQTRHETAIAVGSADEMGRVVIRSGQRFIKRHPAISLAWVFGLVMSI-LASGYTPTPEAVQNYEVKMASLNDEVLAEAEAEMLYWDKIYRRSKGMFWTCDAQCTANKQEYEQRRNIYLDLNKDYLKGVAEAKSELGIFSEDGVEETRDLFWRKVSGGKQYAKRATMWDAVFVGMGTMSR-RDEGLAAIIARIAFKFVINLTIGLFMAVFQFLFSVWNVIWSYQPDPVSTVAFAAMASLXXXXXXXXXXXXXXXXXXXGVYAVAKLAETAQIEAARQGGGQDPRRRPQFAPH 981
            M +RRQP       IA  S   MG +V++  + F K +P I+  ++FG+V+ + + +G   T +    Y+  M++++ +   +A +     +  Y  SKG F +CD+ C  NK+  E  +     +  +    +++AK   G+FSE G+ E +D FW   + GK++AKR TMWDA+FVGM +MSR RDE +     +I  + +IN ++GL MA+F F+F +W +I SYQP P+  V F  MA+                    GVY+VA+LA+ A +    + GGQ  RR+ Q  PH
Sbjct:    1 MDNRRQP----GGTIANASMPPMGPLVVQGVKSFAKHNPIITSTYLFGIVVLLTVGTGTKLTFDQQNQYDRIMSTIDLDAEYDAASRYAAANNAYYHSKGWF-SCDSYCQRNKKRMENSKKEVDAVRAEGNARMSDAKKVAGLFSEVGIGEVKDSFWALFNQGKRFAKRQTMWDALFVGMRSMSRGRDESIIEFGLKILLQLLINFSLGLLMALFLFVFGLWTIIKSYQPSPMMAVLFFVMATSAAFAFVATFLLALYGAAAGGVYSVAQLAQ-ANMRLQAESGGQ--RRQFQQRPH 289          
BLAST of mRNA_L-elsbetiae_contig5382.13591.1 vs. uniprot
Match: A0A7S1D1B9_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D1B9_CYCTE)

HSP 1 Score: 152 bits (384), Expect = 5.870e-40
Identity = 89/259 (34.36%), Postives = 149/259 (57.53%), Query Frame = 1
Query:  160 EMGRVVIRSGQRFIKRHPAISLAWVFG-LVMSILASGYTPTPEAVQNYEVKMASLNDEVLAEAEAEMLYWD--KIYRRSKGMFWTCDAQCTANKQEYEQRRNIYLDLNKDYLKG---VAEAKSELGIFSEDGVEETRDLFWRKVSGGKQYAKRATMWDAVFVGMGTMSRRDEGLAAIIARIAFKFVINLTIGLFMAVFQFLFSVWNVIWSYQPDPVSTVAFAAMASLXXXXXXXXXXXXXXXXXXXGVYAVAKLAETAQ 918
            ++G +++R   RF  R+  +S +++FG LV+  + SG   T +  + Y   M +++  + AE EA   Y +    Y+ +KG F++CD+ C  NKQ  ++ +   LDL+    +G   +++AK+  G+FSE GV+E ++ FW     GK +AKR++MWDA+F+G+ +MSR DE +A    R+  + + N ++GL MA+  F+  +WN++ SYQP+P+  VAF   A+L                   G+Y + KLAET Q
Sbjct:    2 DLGGIIVRGVTRFAHRNKVLSGSYLFGILVLIFMGSGTQLTLQQRREYNKIMDTID--IRAEYEASQRYANARNAYQSTKGWFFSCDSLCQRNKQRMDRAK---LDLDSVREEGNARMSDAKAVAGLFSEIGVDEVKESFWSYFQSGKDFAKRSSMWDAMFIGLRSMSR-DETMAEYALRLIIQILFNFSLGLIMALVIFVIGLWNIVSSYQPNPIVAVAFFLCAALAAFSFVISYLLVMYGAVAGGMYGIVKLAETNQ 254          
BLAST of mRNA_L-elsbetiae_contig5382.13591.1 vs. uniprot
Match: A0A1Z5KJS4_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KJS4_FISSO)

HSP 1 Score: 152 bits (384), Expect = 9.830e-40
Identity = 87/264 (32.95%), Postives = 140/264 (53.03%), Query Frame = 1
Query:  139 IAVGSADEMGRVVIRSGQRFIKRHPAISLAWVFGLVMSIL--ASGYTPTPEAVQNYEVKMASLNDEVLAEAEAEMLYWDKI--YRRSKGMFWTCDAQCTANKQEYEQRRNIYLDLNKDYLKGVAEAKSELGIFSEDGVEETRDLFWRKVSGGKQYAKRATMWDAVFVGMGTMSR-RDEGLAAIIARIAFKFVINLTIGLFMAVFQFLFSVWNVIWSYQPDPVSTVAFAAMASLXXXXXXXXXXXXXXXXXXXGVYAVAKLAETA 915
            IA+ + D+MG +++R    FI+R+P +S  +  G+++ I+    G   TPE  Q+YE        ++ AE  A   YW     Y+ S+G  W CDA CT N Q  ++   I   + ++     A+AK+  G+ SE G+ E +D FW     GK++AKR TMWD +F+G+ +MSR RDE       ++  + ++NL++GL MA+  F+  +W ++ SYQP+P+  V F    ++                   GVY + K+AE A
Sbjct:   12 IALPNPDQMGTLILRGSVAFIRRNPVVSGTYFLGILLLIIFGGGGRPLTPE--QHYEYHRILQTVDLQAEYRATDDYWRAYHAYQASRGWLWGCDAVCTRNYQRMKEAERIMHLIQQEGAARTADAKNAAGLLSEIGIGEVQDSFWGYFHAGKRFAKRQTMWDMMFMGIRSMSRGRDESWMEFAVKVLLQVLLNLSMGLVMALIFFVMGLWTIVRSYQPNPLVAVLFFCGGAIAAFSFVVTYLLAVYGAAAGGVYTILKVAENA 273          
BLAST of mRNA_L-elsbetiae_contig5382.13591.1 vs. uniprot
Match: A0A7S2WBN5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WBN5_9STRA)

HSP 1 Score: 150 bits (378), Expect = 1.210e-38
Identity = 87/269 (32.34%), Postives = 141/269 (52.42%), Query Frame = 1
Query:  175 VIRSGQRFIKRHPAISLAWVFGLVMSILASGYTPTPEAVQNYEVKMASLNDEVLAEAEAEMLYWDKIYRRSKGMFWTCDAQCTANKQEYEQRRNIYLDLNKDYLKGVAEAKSELGIFSEDGVEETRDLFWRKVSGGKQYAKRATMWDAVFVGMGTMSRRDEGLAAIIARIAFKFVINLTIGLFMAVFQFLFSVWNVIWSYQPDPVSTVAFAAMASLXXXXXXXXXXXXXXXXXXXGVYAVAKLAETAQIEAARQGGGQDPRRRPQFAPH 981
            ++R      K+H A++ +++ GL++    +G+    E    Y+  + ++++  L  A          YR S+G FWTCD +C  +KQ Y   +       +   + V +AK ++G+FSE GV+ETRD+FW+  +GG+Q+ +R +MWD +F G      RDE L  ++ R   +   N TIG+ MA+  FLF VW+VI SYQPDPV+ + F A A++                    +  VAK+A    ++  R+  GQD RR  +  P+
Sbjct:   38 LLRGTVGLAKKHKAVTGSYLLGLLLLAFGTGFRVAEETQAAYQATLDTVDEAGLQHAHESFYAAQDRYRSSQGWFWTCDQKCQVHKQRYLDAKARLDSALEQERRVVRDAKKQVGLFSEYGVQETRDVFWQYFAGGRQWGQRQSMWDLLFAGFRW--GRDEELFTVVCRWLLELAFNFTIGMVMALIMFLFGVWSVISSYQPDPVTGLVFYAAAAITAVSCVATYLLCIYGATAGSIAVVAKVA----VDHNRRL-GQDQRRSGRRIPY 299          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5382.13591.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHR8_ECTSI1.250e-13268.95Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z0D4_9STRA5.170e-5040.59Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S0C9V1_9STRA4.100e-4634.75Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S2A693_TRICV9.360e-4335.29Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S2WRM9_9STRA5.780e-4234.10Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A7S1IGG2_9EUGL7.860e-4234.38Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A7S1G116_9STRA2.230e-4134.34Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A7S1D1B9_CYCTE5.870e-4034.36Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A1Z5KJS4_FISSO9.830e-4032.95Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S2WBN5_9STRA1.210e-3832.34Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5382contigL-elsbetiae_contig5382:1593..6011 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score392.9
Seed ortholog evalue1.7e-106
Seed eggNOG ortholog2880.D7FHR8
Hectar predicted targeting categoryother localisation
EggNOG OGs28IGU@1,2QQTP@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-07_006530.1
Exons7
Model size1159
Cds size1158
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816561.2659953-CDS-L-elsbetiae_contig5382:1592..18951622816561.2659953-CDS-L-elsbetiae_contig5382:1592..1895Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5382 1593..1895 +
1691683648.419565-CDS-L-elsbetiae_contig5382:1592..18951691683648.419565-CDS-L-elsbetiae_contig5382:1592..1895Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5382 1593..1895 +
1622816561.2794044-CDS-L-elsbetiae_contig5382:2340..24201622816561.2794044-CDS-L-elsbetiae_contig5382:2340..2420Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5382 2341..2420 +
1691683648.432683-CDS-L-elsbetiae_contig5382:2340..24201691683648.432683-CDS-L-elsbetiae_contig5382:2340..2420Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5382 2341..2420 +
1622816561.2905066-CDS-L-elsbetiae_contig5382:2792..29101622816561.2905066-CDS-L-elsbetiae_contig5382:2792..2910Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5382 2793..2910 +
1691683648.44308-CDS-L-elsbetiae_contig5382:2792..29101691683648.44308-CDS-L-elsbetiae_contig5382:2792..2910Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5382 2793..2910 +
1622816561.3025928-CDS-L-elsbetiae_contig5382:3426..34951622816561.3025928-CDS-L-elsbetiae_contig5382:3426..3495Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5382 3427..3495 +
1691683648.4561098-CDS-L-elsbetiae_contig5382:3426..34951691683648.4561098-CDS-L-elsbetiae_contig5382:3426..3495Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5382 3427..3495 +
1622816561.315738-CDS-L-elsbetiae_contig5382:3958..40681622816561.315738-CDS-L-elsbetiae_contig5382:3958..4068Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5382 3959..4068 +
1691683648.4672859-CDS-L-elsbetiae_contig5382:3958..40681691683648.4672859-CDS-L-elsbetiae_contig5382:3958..4068Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5382 3959..4068 +
1622816561.327995-CDS-L-elsbetiae_contig5382:5121..53591622816561.327995-CDS-L-elsbetiae_contig5382:5121..5359Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5382 5122..5359 +
1691683648.4803815-CDS-L-elsbetiae_contig5382:5121..53591691683648.4803815-CDS-L-elsbetiae_contig5382:5121..5359Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5382 5122..5359 +
1622816561.3397915-CDS-L-elsbetiae_contig5382:5771..60111622816561.3397915-CDS-L-elsbetiae_contig5382:5771..6011Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5382 5772..6011 +
1691683648.4932373-CDS-L-elsbetiae_contig5382:5771..60111691683648.4932373-CDS-L-elsbetiae_contig5382:5771..6011Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5382 5772..6011 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5382.13591.1prot_L-elsbetiae_contig5382.13591.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5382 1593..6011 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5382.13591.1

>prot_L-elsbetiae_contig5382.13591.1 ID=prot_L-elsbetiae_contig5382.13591.1|Name=mRNA_L-elsbetiae_contig5382.13591.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=386bp
TRTTPSLTEHTVAVAALQQGADRQTASRGRSKMSSRRQPQTRHETAIAVG
SADEMGRVVIRSGQRFIKRHPAISLAWVFGLVMSILASGYTPTPEAVQNY
EVKMASLNDEVLAEAEAEMLYWDKIYRRSKGMFWTCDAQCTANKQEYEQR
RNIYLDLNKDYLKGVAEAKSELGIFSEDGVEETRDLFWRKVSGGKQYAKR
ATMWDAVFVGMGTMSRRDEGLAAIIARIAFKFVINLTIGLFMAVFQFLFS
VWNVIWSYQPDPVSTVAFAAMASLAAVSLLATWLLGLAAVGVTGVYAVAK
LAETAQIEAARQGGGQDPRRRPQFAPHSQQQQQQQRQQQQQQQQQPYQQQ
QQQQQQQQQQQQQPRRRPAAAAAAPSMSTNWNSID*
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mRNA from alignment at L-elsbetiae_contig5382:1593..6011+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5382.13591.1 ID=mRNA_L-elsbetiae_contig5382.13591.1|Name=mRNA_L-elsbetiae_contig5382.13591.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4419bp|location=Sequence derived from alignment at L-elsbetiae_contig5382:1593..6011+ (Laminarionema elsbetiae ELsaHSoW15)
ACCAGAACAACCCCTTCTCTTACAGAGCACACAGTAGCAGTAGCGGCATT GCAGCAAGGAGCAGATAGACAGACAGCCTCCAGAGGCCGGAGCAAAATGT CGAGCCGACGACAACCGCAGACGAGACATGAGACTGCGATCGCCGTGGGC AGCGCAGACGAGATGGGGAGGGTTGTCATCAGGAGCGGGCAGCGCTTTAT CAAGCGTCATCCGGCCATCTCCTTGGCTTGGGTGTTCGGCCTGGTGATGT CGATCTTGGCGTCGGGTTATACGCCTACCCCGGAAGCAGTGCAGAACTAC GAGGTATGATATGATGATATGAACGAGTGGCGAGAAGCAGGCGACCGTAC GGGCACGAACAGCAGTAGTACGATATGCTGGTACCACATGGCAGTCTAGG AAGCCAATGCAGTACAACAGCAGTAGATGTGCTGGTACCACCAGTCTCGG AAACCTATGCAGAATGTAGTCTTCATCGCCCCTGTCAGTAGAGTTATCTG TTCCTCGTGTTGATCACCTTGTACAGAGAGTGTCGAACCGAGCGGCAGTA ACACGAACGCACCAACCTATTCCTTGGTTGGGCGGTACACACCGGTAACC AGGCTGAAGTGAAGTTATCAATGTGTCGCGGGGAAGCAACCGTTACGCGA GGGTACCGGCCACAATCTGCCACACAGCTTCAATCGGAAACACGTTGTAT GGTTCGAACATGGGTGCAACACACCGCCTTCCTTACAATACCTTACAGGT GAAGATGGCAAGCCTGAACGACGAGGTGCTGGCGGAGGCAGAGGCGGAAA TGCTCTACTGGGACAAGATTTACAGAAGGTAGGGGGGTTGCCAAATACCG ACGAATTCGCAAAGGTTGTCTGGTTTTGGAGAGACGCACATCGTCGTTTG GAAGCTGCTGCAGCTTTCTTTCCCATTCCGATTGCCGGGGAGCTGGAGCT GGGACGGCGATTCGCCTCGGCTGCTCGCAACCATTCGCGAAGAGAACATC GTTCGAAGTTTGGAAGGCTTCAAGAGAACGTTTGACACGCGGCCTGTCAA CGAAGGCATCCACCCCGGCGTGCCAAGGGCGGGTACGGTGTACGGTGTCC TCCCGCGCGAAAAAGTATAGGGTTGATCGACTCCTCTTTGTATTTGTAGA CCTGAAAACCACCATGCTAAATATACTCAATCGATGCCGTGCTGCTTCAG GTCGAAGGGCATGTTCTGGACGTGCGATGCGCAGTGCACGGCCAACAAAC AGGAATACGAGCAGAGGCGAAATATCTACCTCGATCTCAACAAAGACTAC CTCAAGGGGGTGGCAGAGGTATGTGTGTATGTTGGTGGTGGCAACTAGAT GGCCCGGTGGGTTTCGGCTTCTTGTGTACGTACATACGCCGCGCCTCTTT TCTGGGCAGCAATGTGCGTCTGTGTTCATATTTTAGTTTGTGCTGCCTCC ACCTGCGGCTTTTCCTTTTGACCGCACACATCTCACGCGTGGTCTACCAC CTCTCTGTCAGCCCCTCTGGAGCACTGGAACACGGGGCTAGAGCCTGCCT GCCTGCCTGCCGCAAAGTATAGCATACACGCCTCGTTTCTGAAGTCTTAA GTGTATGGTAGCATGGCGAATCAGTGCGTTTGGACAGTCCCGGAGAGGTT ACCGTAGTTCCTGTCGACTAATAGCACCGCCAGAAGAGCAGCGTTTCGCA TGTTTGTTGTCAAACTGCTGTCCGACCTCGTAGGCCATGCAGTGCTGGAT TTCGTGGAATCATTTTCCCAAACACCAACCTCACCAACCTAACCCATGTT GATTTTCTTTGTCGTTCATGCCGTGCCGTGCCAGGCGAAGTCCGAGCTTG GCATCTTCTCCGAAGACGGCGTGGAAGAGACAAGAGACCTCTTCTGGAGG AAGGTATTTATTATGTGATGTGATGTGATGTGATGTGTGCTGGCTGTGTG CTGCCGCGGCCGCACCGTACGTAGAAAACACGCAGAAGCGCATGGAATTT TTCGGTCGGGATTGGGAACTAACGTGGCCAGTTGCCATCTTCCTAGATAC TCCGATGTAGTTTGGGCTTCGTTCTGGCTTCCCACACCAACTTACGTACC TTACCCACGAGCTGCTGCAGAGGCCCCCATGCCCGGCTCTCTGCAGCAGA AATAAAAGCTTCAACGCTAAATACGCTGCCCGAATGTCGGCAGAGTATTG CGTAGGAGTAGCAAGCAGTGTGTCTCAATACGAATGCCCGTCGATGTCGA CTATTTAGTTGTAGTTTTGCTTGACTCGCAGGCAATACCTGATCGATTTT CTTGTCTTGCACCCTGCTCGATGTGATTGGCTTGGGTATTGTCCCCGCGG GCACGGGCGCGGGCAGGTATCGGGCGGCAAGCAGTACGCCAAGAGGGCAA CCATGTGGGACGCCGTTTTTGTGGGCATGGGTACCATGAGCAGGAGAGAT GAGGGCTTGGCGGCGATCATCGCAAGGTGTGTGCCGATACGAATTGAAGT TAAATGTATACATAAAGGGGTGTGTCGTTCCCGATGCGTTTTTATGCATT TGGAGGGTGTGTTCGCGACTGGTTTGAGGTGAGATGTGACCTTCCCGCCT GCACGTGTTGACTTTTTGATGTCCGGTGTCGGATGCCCGATGCTTAGGAA AGGGAAGCCGTGATGCCCAACTGAGAATAGGCGTTTTTTTCAGCTGTTTA TTCCTCCAGATGACTGCTAAAGAGTGCCTCTGTACCGCCGTGTTTGTTTT GTATCTTTGTTCACGTGATAAAAGTATCATATTGTAGAAGTACGTACATC TATACGTGGGGTTAGGGTTAGGCCGCCATCCCCTTCACGGGCATGGCCTT TCTTCCATCTTGGGCATAGACACATATATCGACACAATTATAGAGTCATC GTAGTCAACAAACCCGCCGAAGGTGTGGTACTCCATGTAGTGTCGGTGGC AGCAGGGCCGACTGCAGGACGGGCGGGAAATGTCGCCGGTGCATTCTGGA CAATGCTCTGCGCTGCACTTGTATGTGTGGGCTGGATTTGGGCCGGCCGT AGGGTGTGGCAAGGAGTGTCCACAGGGGATGCGGGGTGTGGTATGCCGCC GCCCCTTACGAAGCACTTCGGTAGTAACGAAAAAGTTTCTGCCGTAAGTG GTAAGTATACACTTCGTATGTACATCAGAGGCCAAGAGGGTATAAGACAA CATGCTACTTCTATAGATAGCAAATATTTTTCCTTCAGTGCATGGGAGAG AATACTACAAAGAAGGCGCAACAAATGTGGGCGGTGCGTTGCGTTGGGGG TAAAGGCTTCGCCCACTCTAGCTTTCGAGAGAGATATTGGTGTAGCATAT GCGTACGTACAAGCGTCCGAACGACTGAGGAAAGCAAGAAACCTGAACTA CTTGTACCACCCCCCTGCTGCCGTGCATGGTGCTGACTACCCCCCTCCCC CCCCCCCCCACTTCTACGGTCGCCTCCGGCCCCCCGCTGTCGTTTCCGGC GCCGCGCCTCGCGTCCTCCCCAACACCAGGATTGCCTTCAAATTCGTGAT TAACCTGACGATTGGCTTGTTCATGGCAGTCTTCCAGTTCCTCTTCTCCG TCTGGAACGTGATCTGGTCCTACCAGCCAGATCCGGTCTCTACCGTGGCG TTCGCGGCCATGGCGTCTCTGGCGGCGGTGTCTCTTCTGGCCACCTGGCT GCTGGGCTTGGCGGCTGTGGGAGTCACGGGAGTGTACGCCGTCGCGAAGC TGGCGGAGACTGCGCAGGTGCAGTCTACGATAGTTCAGACAGCAATACAG CAGCAGTGGTGCAGTACGGGACGTACTTACGTCTAGATGAATGCTTGGCC CGCGGTGGTGTTTCCTCGGGGCTTGGAAAAACAACGAGCCTTGTTTTGGA AGTCTCCCGCGTGTGTCTCTGTTACAGCTTGACGGGAGTCCCCTCTTCCT GTCGGGCTTGAATGCTCCGGTAGCGACTCCGGCGCTTGGCGCTTCCTACC GTTTCCCACCAGAGTCTTAAGGGCTCAGTGTTTGGTTGCGATGTCTGTCT GTCCAACGATATCGTTGGCGCGAATTAATGTCGATCGATGCTGCTGGTGC TTGCCCCGCTAACTCTGCCGATGGCGCTTGACTGGGTAACTTGCAATGGT TGCATTGACTGCGTTGATTTGCATTGCAGATCGAAGCGGCGCGGCAGGGG GGGGGGCAGGACCCTCGCCGCCGGCCGCAGTTCGCCCCGCACTCACAGCA GCAGCAGCAGCAGCAGCGACAGCAACAGCAACAGCAACAGCAACAACCGT ACCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAA CCTAGGCGGAGACCAGCGGCGGCCGCGGCGGCGCCGTCCATGTCGACAAA CTGGAACAGCATCGACTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig5382:1593..6011+

>mRNA_L-elsbetiae_contig5382.13591.1 ID=mRNA_L-elsbetiae_contig5382.13591.1|Name=mRNA_L-elsbetiae_contig5382.13591.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2316bp|location=Sequence derived from alignment at L-elsbetiae_contig5382:1593..6011+ (Laminarionema elsbetiae ELsaHSoW15)
ACCAGAACAACCCCTTCTCTTACAGAGCACACAGTAGCAGTAGCGGCATT
GCAGCAAGGAGCAGATAGACAGACAGCCTCCAGAGGCCGGAGCAAAATGT
CGAGCCGACGACAACCGCAGACGAGACATGAGACTGCGATCGCCGTGGGC
AGCGCAGACGAGATGGGGAGGGTTGTCATCAGGAGCGGGCAGCGCTTTAT
CAAGCGTCATCCGGCCATCTCCTTGGCTTGGGTGTTCGGCCTGGTGATGT
CGATCTTGGCGTCGGGTTATACGCCTACCCCGGAAGCAGTGCAGAACTAC
GAGACCAGAACAACCCCTTCTCTTACAGAGCACACAGTAGCAGTAGCGGC
ATTGCAGCAAGGAGCAGATAGACAGACAGCCTCCAGAGGCCGGAGCAAAA
TGTCGAGCCGACGACAACCGCAGACGAGACATGAGACTGCGATCGCCGTG
GGCAGCGCAGACGAGATGGGGAGGGTTGTCATCAGGAGCGGGCAGCGCTT
TATCAAGCGTCATCCGGCCATCTCCTTGGCTTGGGTGTTCGGCCTGGTGA
TGTCGATCTTGGCGTCGGGTTATACGCCTACCCCGGAAGCAGTGCAGAAC
TACGAGGTGAAGATGGCAAGCCTGAACGACGAGGTGCTGGCGGAGGCAGA
GGCGGAAATGCTCTACTGGGACAAGATTTACAGAAGGTGAAGATGGCAAG
CCTGAACGACGAGGTGCTGGCGGAGGCAGAGGCGGAAATGCTCTACTGGG
ACAAGATTTACAGAAGGTCGAAGGGCATGTTCTGGACGTGCGATGCGCAG
TGCACGGCCAACAAACAGGAATACGAGCAGAGGCGAAATATCTACCTCGA
TCTCAACAAAGACTACCTCAAGGGGGTGGCAGAGGTCGAAGGGCATGTTC
TGGACGTGCGATGCGCAGTGCACGGCCAACAAACAGGAATACGAGCAGAG
GCGAAATATCTACCTCGATCTCAACAAAGACTACCTCAAGGGGGTGGCAG
AGGCGAAGTCCGAGCTTGGCATCTTCTCCGAAGACGGCGTGGAAGAGACA
AGAGACCTCTTCTGGAGGAAGGCGAAGTCCGAGCTTGGCATCTTCTCCGA
AGACGGCGTGGAAGAGACAAGAGACCTCTTCTGGAGGAAGGTATCGGGCG
GCAAGCAGTACGCCAAGAGGGCAACCATGTGGGACGCCGTTTTTGTGGGC
ATGGGTACCATGAGCAGGAGAGATGAGGGCTTGGCGGCGATCATCGCAAG
GTATCGGGCGGCAAGCAGTACGCCAAGAGGGCAACCATGTGGGACGCCGT
TTTTGTGGGCATGGGTACCATGAGCAGGAGAGATGAGGGCTTGGCGGCGA
TCATCGCAAGGATTGCCTTCAAATTCGTGATTAACCTGACGATTGGCTTG
TTCATGGCAGTCTTCCAGTTCCTCTTCTCCGTCTGGAACGTGATCTGGTC
CTACCAGCCAGATCCGGTCTCTACCGTGGCGTTCGCGGCCATGGCGTCTC
TGGCGGCGGTGTCTCTTCTGGCCACCTGGCTGCTGGGCTTGGCGGCTGTG
GGAGTCACGGGAGTGTACGCCGTCGCGAAGCTGGCGGAGACTGCGCAGGA
TTGCCTTCAAATTCGTGATTAACCTGACGATTGGCTTGTTCATGGCAGTC
TTCCAGTTCCTCTTCTCCGTCTGGAACGTGATCTGGTCCTACCAGCCAGA
TCCGGTCTCTACCGTGGCGTTCGCGGCCATGGCGTCTCTGGCGGCGGTGT
CTCTTCTGGCCACCTGGCTGCTGGGCTTGGCGGCTGTGGGAGTCACGGGA
GTGTACGCCGTCGCGAAGCTGGCGGAGACTGCGCAGATCGAAGCGGCGCG
GCAGGGGGGGGGGCAGGACCCTCGCCGCCGGCCGCAGTTCGCCCCGCACT
CACAGCAGCAGCAGCAGCAGCAGCGACAGCAACAGCAACAGCAACAGCAA
CAACCGTACCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
GCAGCAACCTAGGCGGAGACCAGCGGCGGCCGCGGCGGCGCCGTCCATGT
CGACAAACTGGAACAGCATCGACTGAATCGAAGCGGCGCGGCAGGGGGGG
GGGCAGGACCCTCGCCGCCGGCCGCAGTTCGCCCCGCACTCACAGCAGCA
GCAGCAGCAGCAGCGACAGCAACAGCAACAGCAACAGCAACAACCGTACC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACCT
AGGCGGAGACCAGCGGCGGCCGCGGCGGCGCCGTCCATGTCGACAAACTG
GAACAGCATCGACTGA
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