mRNA_L-elsbetiae_contig538.13588.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig538.13588.1 vs. uniprot
Match: D8LS44_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS44_ECTSI) HSP 1 Score: 168 bits (425), Expect = 2.160e-41 Identity = 77/94 (81.91%), Postives = 87/94 (92.55%), Query Frame = 1 Query: 472 MPLLGHRYRYVSIIGTGRFSDVIRAEDTFRPGRSVAIKVVNIGCGAVAVREVRLMRFLGSVPNSEFCPVVRLLDVLTYRGHYCLVTELFDGTLT 753 MPLLGHRYRYVS IGTGRFSDV+RA+DTFRPGRSVA+KV+N+GCGA+ +REVR MRFL SVP+SEF PVVRLLD LTY+GHYCLVTELF GTL+ Sbjct: 1 MPLLGHRYRYVSTIGTGRFSDVVRAQDTFRPGRSVAVKVMNLGCGAIGIREVRFMRFLSSVPHSEFRPVVRLLDALTYQGHYCLVTELFSGTLS 94
BLAST of mRNA_L-elsbetiae_contig538.13588.1 vs. uniprot
Match: A0A4D9CR04_9STRA (Protein kinase domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CR04_9STRA) HSP 1 Score: 108 bits (269), Expect = 2.790e-21 Identity = 93/311 (29.90%), Postives = 121/311 (38.91%), Query Frame = 1 Query: 472 MPLLGHRYRYVSIIGTGRFSDVIRAEDTFRPGRS-VAIKVVNIGCGAVAVREVRLMRFLGSVPNSEFCPVVRLLDVLTYRGHYCLVTELFDGTLTGRKFGAHAGHPEDSGAGAPAPVATLDYARRGTGPPAPEPEPAAWGGVAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGEGCPAQLIRHVALQLISALLLLHSHGLIHADIKPENVLLKIEGGRSGEGAGGGQPPPARCVGLQDLVRGRAHMEGVESLTVRLCDFGNTIHKSEAYLYYGDFEIQTLPYRAPE 1401 +PL+ RYR++ IG G F+ +I AEDTF P R+ VAIK++N+ + RE +R + +P +V + GH+C+V EL G F + HP +G+ P PE G G L+R AL L+ ALLLLH+ +IHAD+KPENVLL G GG P R G+ G VRL D GN I E LY D+EIQTL YRAPE Sbjct: 128 LPLMLARYRFIRAIGRGTFAQIICAEDTFHPRRTQVAIKILNLNYAEIGKREALCLRMIHDMPEGPHAALVGFHSAFDFMGHFCIVMEL----CVGGSFQDYI-HPLFTGS-----------------PSRPE---------------------------------------LSRQPLHASPHSVGRDGRRDGGRGAGPGLTVPLVREAALHLVKALLLLHNQDVIHADLKPENVLLA--------GPMGGALGPER---------GQHSPRGGWGQHVRLTDLGNAIKSREVKLYRDDYEIQTLGYRAPE 360
BLAST of mRNA_L-elsbetiae_contig538.13588.1 vs. uniprot
Match: A0A6H5KT02_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT02_9PHAE) HSP 1 Score: 95.9 bits (237), Expect = 6.620e-19 Identity = 42/55 (76.36%), Postives = 49/55 (89.09%), Query Frame = 1 Query: 589 VNIGCGAVAVREVRLMRFLGSVPNSEFCPVVRLLDVLTYRGHYCLVTELFDGTLT 753 +N+GCGA+ +REVR MRFL SVP+SEF PVVRLLD LTY+GHYCLVTELF GTL+ Sbjct: 1 MNLGCGAIGIREVRFMRFLSSVPHSEFRPVVRLLDALTYQGHYCLVTELFSGTLS 55
BLAST of mRNA_L-elsbetiae_contig538.13588.1 vs. uniprot
Match: A0A7S2ST04_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2ST04_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 5.030e-17 Identity = 52/110 (47.27%), Postives = 61/110 (55.45%), Query Frame = 1 Query: 1072 PAQLIRHVALQLISALLLLHSHGLIHADIKPENVLLKIEGGRSGEGAGGGQPPPARCVGLQDLVRGRAHMEGVESLTVRLCDFGNTIHKSEAYLYYGDFEIQTLPYRAPE 1401 P ++R VAL LISALL L G+IHADIKPENVLL + PPA L+ V+L DFGN IH++EA LY+ FEIQTL YRAPE Sbjct: 11 PLGVVRRVALDLISALLCLGHQGIIHADIKPENVLLSTD-----------PEPPATEASFGQLMS--------PPFRVKLADFGNAIHRAEAPLYHATFEIQTLAYRAPE 101
BLAST of mRNA_L-elsbetiae_contig538.13588.1 vs. uniprot
Match: A0A8K1CS61_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CS61_PYTOL) HSP 1 Score: 75.9 bits (185), Expect = 4.530e-11 Identity = 94/335 (28.06%), Postives = 126/335 (37.61%), Query Frame = 1 Query: 478 LLGH--RYRYVSIIGTGRFSDVIRAEDTFRPGRSVAIKVV-NIGCGAVAVREVRLMRFLGSVPNSEFCPVVRLLDVLTYRGHYCLVTELF-DGTLTGRKFGA-----------HAGHPEDSGAGAPAPVATLDYARR----GTGPPAPEPEPAAWGGVAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGEGCPAQLIRHVALQLISALLLLHSHGLIHADIKPENVLLKIEGGRSGEGAGGGQPPPARCVGLQDLVRGRAHMEGVESLTVRLCDFGNTIHKSEAYLYYG--------DFEIQTLPYRAPE 1401 LLG RYR++S I +G F+ ++RA D+ +VAIK + + A+ RE L+R L + VVR+LD + H CLV EL D L ++G+ H P+ A L RR T P A EP P A + P IR +A++L +AL LH G+IHAD+KPENVL G S GL+ +V+L DFGN I + + LYY F+IQTL YRAPE Sbjct: 10 LLGRDGRYRFLSRIASGTFAVLLRAWDSVTDS-TVAIKCIQDPAFNAIGEREAALLRELNTRDAMGNVAVVRVLDYFVEQSHCCLVVELLGDPVLDVERWGSWRQARVPFLSEHEQEPQHKL------YALLRRQRRLHDGNTAPVAVEPTPVAQ----------------------------------------------------------VDPLPLHRIRQMAVELCAALAFLHDQGVIHADLKPENVLNASSDGAS-------------SAGLK---------------SVKLVDFGNCIEQQQIALYYNALEEEGMQGFDIQTLAYRAPE 251
BLAST of mRNA_L-elsbetiae_contig538.13588.1 vs. uniprot
Match: A0A3M6VB78_9STRA (Protein kinase domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VB78_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 6.220e-10 Identity = 89/315 (28.25%), Postives = 115/315 (36.51%), Query Frame = 1 Query: 490 RYRYVSIIGTGRFSDVIRAEDTFRPGRSVAIKVVNIG-CGAVAVREVRLMRFLGSVPNSEFCPVVRLLDVLTYRGHYCLVTELFDGTLTGRKFGAHAGHPEDSGAGAPAPVATLDYARRGTGPPAPEPEPAAWGGVAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGEGCPAQLI--RHVALQLISALLLLHSHGLIHADIKPENVLLKIEGGRSG-EGAGGGQPPPARCVGLQDLVRGRAHMEGVESLTVRLCDFGNTIHKSEAYLYYGD-----FEIQTLPYRAPEAS 1407 RYR++ IG+G F+ ++RA D + R VAIK V A+ RE +R + E C VVRLL+ +GH+CLV EL G P LD R G AP G A P LI R +A+ L AL LH GLIHAD+KPENV+ SG E G P P+ C S V+L DFGN + SE Y + +++QT+ YRAPE + Sbjct: 15 RYRFLRRIGSGTFAVIMRALD-MQQQRHVAIKCVRQHELNALGEREAATLRQINEHDMDEACAVVRLLETFEEQGHFCLVLELL-------------GPP------------VLDVERWGPWRQAPP-------GEARVIKRTLQLFKRKRRRSLVPDASTESLDGQRDQERDTMGKDLTVVTP-----------PLSLIDVRQMAVHLCGALAFLHDQGLIHADVKPENVV------HSGAEAPVGSAPFPSPC-----------------SSPVKLVDFGNCLDASELVAYANEHVRDGYDVQTVTYRAPEVA 262
BLAST of mRNA_L-elsbetiae_contig538.13588.1 vs. uniprot
Match: W2QQ55_PHYPN (CMGC protein kinase n=13 Tax=Phytophthora TaxID=4783 RepID=W2QQ55_PHYPN) HSP 1 Score: 72.0 bits (175), Expect = 1.280e-9 Identity = 83/312 (26.60%), Postives = 112/312 (35.90%), Query Frame = 1 Query: 490 RYRYVSIIGTGRFSDVIRAEDTFRPGRSVAIKVVNIG-CGAVAVREVRLMRFLGSVPNSEFCPVVRLLDVLTYRGHYCLVTELFDGTLTGRKFGAHAGHPEDSGAGAPAPVATLDYARRGTGPPAPEPEPAAWGGVAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGEGCPAQLIRHVALQLISALLLLHSHGLIHADIKPENVLLKIEGGRSGEGAGGGQPPPARCVGLQDLVRGRAHMEGVESLTVRLCDFGNTIHKSEAYLYY-----GDFEIQTLPYRAPEAS 1407 RYR++ IG+G F+ ++RA D + R VAIK V A+ RE +R + + C VVRLL+ +GH+CLV EL G P LD R G AP G A +R +A+ L AL +H GLIHAD+KPENV+ + E + G P + C S V+L DFGN + SE Y G F++QT+ YRAPE + Sbjct: 467 RYRFLRRIGSGTFAVIMRALD-IQQQRHVAIKCVRQQELNALGEREAAALRRVNNQDADAACAVVRLLETFEEQGHFCLVLELL-------------GPP------------VLDVGRWGPWRQAP--------GAARVPDWTQQLFKRKRRRSSDPTNIQSPEAQKKLEAAILTPSLSLVD-----------------VRQMAVHLCGALAFIHDQGLIHADVKPENVVRS-----NAEASMGSSPSQSPC-----------------SSPVKLVDFGNCLDASELAAYAEEKTSGGFDVQTVTYRAPEVA 705
BLAST of mRNA_L-elsbetiae_contig538.13588.1 vs. uniprot
Match: H3H072_PHYRM (Protein kinase domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H072_PHYRM) HSP 1 Score: 71.2 bits (173), Expect = 1.450e-9 Identity = 87/314 (27.71%), Postives = 112/314 (35.67%), Query Frame = 1 Query: 490 RYRYVSIIGTGRFSDVIRAEDTFRPGRSVAIKVVNIG-CGAVAVREVRLMRFLGSVPNSEFCPVVRLLDVLTYRGHYCLVTELFDGTLTGRKFGAHAGHPEDSGAGAPAPVATLDYARRGTGPPAPEPEPAAWGGVAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGEGCPAQLI--RHVALQLISALLLLHSHGLIHADIKPENVLLKIEGGRSGEGAGGGQPPPARCVGLQDLVRGRAHMEGVESLTVRLCDFGNTIHKSEAYLYY-----GDFEIQTLPYRAPEAS 1407 RYR++ IG+G F+ ++RA D + R VAIK V A+ RE ++R C VVRLL+ GH+CLV EL GAP LD AR G AP GG G P L+ R +A+ L AL LH GL+HAD+KPENV+ S E G C S V+L DFGN + +SE G F++QT+ YRAPE + Sbjct: 15 RYRFLRRIGSGTFAVIMRALDV-QQQRHVAIKCVRQRELNALGEREADVLRRANVRDADGACAVVRLLETFEEHGHFCLVLELL---------------------GAP----VLDVARWGPWRHAPP------GGARAPNRTLMLVKFKARRSLLPSAAPGIQSPEGRGHETDAV---------------GDAAAPLSLVDVRQMAVHLCGALAFLHDQGLVHADVKPENVVRS-----SAEAPLGASTSSLLC-----------------SSPVKLVDFGNCLDESELTAAAEEQATGGFDVQTVTYRAPEVA 259
BLAST of mRNA_L-elsbetiae_contig538.13588.1 vs. uniprot
Match: A0A8J5IXF0_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5IXF0_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 1.660e-9 Identity = 84/312 (26.92%), Postives = 108/312 (34.62%), Query Frame = 1 Query: 490 RYRYVSIIGTGRFSDVIRAEDTFRPGRSVAIKVVNIG-CGAVAVREVRLMRFLGSVPNSEFCPVVRLLDVLTYRGHYCLVTELFDGTLTGRKFGAHAGHPEDSGAGAPAPVATLDYARRGTGPPAPEPEPAAWGGVAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGEGCPAQLIRHVALQLISALLLLHSHGLIHADIKPENVLLKIEGGRSGEGAGGGQPPPARCVGLQDLVRGRAHMEGVESLTVRLCDFGNTIHKSEAYLYY-----GDFEIQTLPYRAPEAS 1407 RYR++ IG+G F+ ++RA D + R VAIK V AV RE +R + C VVRLL+ +GH+CLV EL G P LD R G AP G + +R +A+ L AL LH GLIHAD+KPENV+ S E G C S V+L DFGN + SE Y G F++QT+ YRAPE + Sbjct: 415 RYRFLRRIGSGTFAVIMRALDV-QQRRHVAIKCVRQRELNAVGEREAAALRRVNEQDTDAACAVVRLLETFEEQGHFCLVLELL-------------GPP------------VLDVGRWGPWRQAP-------GAIRAPDWTQQLFKRKRRRSSLPPPDATSLQSPEAQQKHETDTAKESIVLTPFLSLVD--------VRQMAVHLCGALAFLHDQGLIHADVKPENVVRS-----SAEAPVGSSTSQTPC-----------------SSPVKLVDFGNCLDASELVAYAEEQTSGGFDVQTVTYRAPEVA 663
BLAST of mRNA_L-elsbetiae_contig538.13588.1 vs. uniprot
Match: A0A2C9LJ90_BIOGL (Protein kinase domain-containing protein n=2 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9LJ90_BIOGL) HSP 1 Score: 71.6 bits (174), Expect = 1.880e-9 Identity = 40/109 (36.70%), Postives = 61/109 (55.96%), Query Frame = 1 Query: 1084 IRHVALQLISALLLLHSHGLIHADIKPENVLLKIEGGRSGEGAGGGQPPPARCVGLQDLVRGRAHMEGVESLTVRLCDFGNTIHKSEAYLYYGDFEIQTLPYRAPEASM 1410 +R ++ QL++AL L + +IHAD+KP+N+L++ + +DL TV L DFGN ++KSE+++Y+ DFEIQTLPYRAPE + Sbjct: 185 LRKISRQLLTALAFLKTQEVIHADVKPDNILVEDD---------------------EDLD------------TVTLIDFGNALNKSESFVYHSDFEIQTLPYRAPEVHL 260 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig538.13588.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig538.13588.1 >prot_L-elsbetiae_contig538.13588.1 ID=prot_L-elsbetiae_contig538.13588.1|Name=mRNA_L-elsbetiae_contig538.13588.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=472bp AVRRPGTHVAYRRVAPMEPYARGNTGKFPLSSLAEETTKGVGITGASVTSback to top mRNA from alignment at L-elsbetiae_contig538:24716..30442- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig538.13588.1 ID=mRNA_L-elsbetiae_contig538.13588.1|Name=mRNA_L-elsbetiae_contig538.13588.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5727bp|location=Sequence derived from alignment at L-elsbetiae_contig538:24716..30442- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig538:24716..30442- >mRNA_L-elsbetiae_contig538.13588.1 ID=mRNA_L-elsbetiae_contig538.13588.1|Name=mRNA_L-elsbetiae_contig538.13588.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2832bp|location=Sequence derived from alignment at L-elsbetiae_contig538:24716..30442- (Laminarionema elsbetiae ELsaHSoW15)back to top |