mRNA_L-elsbetiae_contig538.13587.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig538.13587.1 vs. uniprot
Match: D8LS44_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS44_ECTSI) HSP 1 Score: 315 bits (806), Expect = 1.920e-91 Identity = 396/792 (50.00%), Postives = 450/792 (56.82%), Query Frame = 1
Query: 1 VLMGCPFGPAVDSWSVGVVLLELLIGRPLFDTAGSRAALLRQTVCAFGPMPLRRFRVGHFFSEYYAPDQSLKVGGPI----DGHVRMGCCSCCWLGNKLSVYGGSGQQASPDGAATGSYCDGRCAQRCRR-PDRHSAGSA-PLQAAA-GRRGLRSVGPTGSSGWGVAHAHLSRLIAAAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNSPRVRKPLPRRFASSTSGIARQ-NPRLLSLLAGLLCFDPDERLTPLQALAHPFFGGALPFAALPRTATAAEHPRKAPPPAVEPAAATTSPAEGTADHGNPAAPARHGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLADDTQTDPARREAGGT--------------GAIRADGGTKPSLETPGV------AAATRNGTLNRSCKVDGGSDSAGG---ETDPTAQLRRLAEMAGAMVSEGSSVRYKRGRDGGGXXXXXXXXXXXXXXXXXXSPRRNPFLNASPLARLKHGEPPADSRTPRVSGTSARRPQQANHSLPKTPPASKRRPNRFLTPATLALLNPDLGVRKKAGATAXXXXXXXXXXXXXXXXXXXXXXXXERLGXXXXXXXXXXXXXXXXXXXXXXXXXRKFPARRDKIATTPEGKKHSTSATPTRAATRAAVTAQLKQRKEGLEKEEXXXXXXXXREEDPTPCEKREPDAPTATKRKRTRRPA---RAADDNSHGAATCS---RAREGGRMATPRRAAVAAGVAILRLRDDDESSDGSLTL 2265
VLMGCPFGPAVD W VGV+LLELL+GRPLFDTAGSR AL+ QTVCA GPMPLRRFRVGH+FSEY+ SL+ G P D H+RMGCCSCCW+G + S PD S CDG CA RCRR D GSA PL AAA GRRGL P GS+G + A +SRLI A XXXXXXXXXXXXXXXXXXXXXXXXXXXX N PR+ +P PRR S+T+ +A Q N RLLSL++GLL +DPDERLTP QALAHPFFG LPF LP TA A P TS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + T R T GA RA S+ TP A + NGT + + G S A E +PTAQL++LAEMA ++ + S RY RGR GG XXXXXXXXXXXXXXXXXX RRN FLNA A LK PA+ P VSGT + +RRPNRFLTPATLA+L PDLGV ++ A XXXXXXXXXXXXXXXXXX ++ G XXXXXXXXXXXX + P+ +K+ K + TP AA R AV A ++ ++G K P ++EP AT RKR RR A RA N T R RE GR TPRRAA+ A AI+RLR+DDESSDGSL+L
Sbjct: 137 VLMGCPFGPAVDVWGVGVILLELLLGRPLFDTAGSRVALVHQTVCALGPMPLRRFRVGHYFSEYFPKGMSLQAGIPTANSGDEHMRMGCCSCCWIGVRRS----------PDEDPDVSSCDGCCALRCRRLSDMRGDGSAAPLAAAAAGRRGLGP--PAGSTGCSSSEACISRLIGAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRQHSNHPRLARPKPRRPPSATTAVAGQKNKRLLSLISGLLRYDPDERLTPAQALAHPFFGETLPFEVLPPTAVA-------------PGLGQTSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPARRRSLPDGNGVVDNGWQRARHEEATTSTHRSGRTTTKSPEISSSGRVDAGAARASPARVVSMATPSRRHDDNDAGSRTNGTSDVPPRPTGSSSGASNSKEEAEPTAQLQQLAEMAEVIIKDNS--RYSRGRAGGTXXXXXXXXXXXXXXXXXXXXRRNRFLNAERFASLKRESSPAEPEVPAVSGTPTEEQRXXXXXXXXXXTRGRRRPNRFLTPATLAILKPDLGVTRRQHADXXXXXXXXXXXXXXXXXXXSEAREVDKAGGYSGLCAQRTXXXXXXXXXXXXAAHQD-PSSMEKV-------KRLSWETPGEAARREAVVAATREPEDGRVKPAA------------APSVQQEP---CATGRKRARRSATGDRARAANKGQGPTIPSRMRERERGRSTTPRRAAMVAEAAIIRLREDDESSDGSLSL 878
BLAST of mRNA_L-elsbetiae_contig538.13587.1 vs. uniprot
Match: A0A835YK57_9STRA (Protein kinase domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK57_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 4.670e-12 Identity = 34/61 (55.74%), Postives = 40/61 (65.57%), Query Frame = 1
Query: 1 VLMGCPFGPAVDSWSVGVVLLELLIGRPLFDTAGSRAALLRQTVCAFGPMPLRRFRVGHFF 183
VL GCPFG D +S+GV+LLE ++GRPLF TA SR L QT CA G P FR G F+
Sbjct: 21 VLHGCPFGTPADMYSLGVLLLEAVLGRPLFRTASSRVGLAIQTACALGAAPRALFRAGKFY 81
BLAST of mRNA_L-elsbetiae_contig538.13587.1 vs. uniprot
Match: A0A4D9CR04_9STRA (Protein kinase domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CR04_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 2.540e-7 Identity = 29/69 (42.03%), Postives = 45/69 (65.22%), Query Frame = 1
Query: 10 GCPFGPAVDSWSVGVVLLELLIGRPLFDTAGSRAALLRQTVCAFGPMPLRRFRVGHFFSEYYAPDQSLK 216
G F +D WS+GV+L+EL +GRPLF A S+A ++++ + GP+P R F G F++ Y+ PD L+
Sbjct: 368 GRAFDHKIDMWSLGVLLVELYLGRPLFR-ASSQALMVKRILSVLGPLPARAFVTGKFYTAYFGPDHRLR 435
BLAST of mRNA_L-elsbetiae_contig538.13587.1 vs. uniprot
Match: A0A835ZFW0_9STRA (Protein kinase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFW0_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 5.950e-7 Identity = 29/47 (61.70%), Postives = 36/47 (76.60%), Query Frame = 1
Query: 1 VLMGCPFGPAVDSWSVGVVLLELLIGRPLFDTAGSRAALLRQTVCAF 141
VL GCPFGP D++S+GV+LLE ++GRPLF TA SRA L QT C +
Sbjct: 290 VLHGCPFGPPADAYSLGVLLLEAVLGRPLFRTAASRAGLAIQTACCW 336
BLAST of mRNA_L-elsbetiae_contig538.13587.1 vs. uniprot
Match: A0A8B7YK66_ACAPL (uncharacterized protein LOC110980534 isoform X1 n=3 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7YK66_ACAPL) HSP 1 Score: 64.7 bits (156), Expect = 6.590e-7 Identity = 28/64 (43.75%), Postives = 45/64 (70.31%), Query Frame = 1
Query: 1 VLMGCPFGPAVDSWSVGVVLLELLIGRPLFDTAGSRAALLRQTVCAFGPMPLRRFRVGHFFSEY 192
V+ G PFGP +D WS+G +L+EL +G PLF A ++ LL++ + GP+P++ F+ G F+SE+
Sbjct: 266 VVYGLPFGPEIDMWSLGCILVELYLGEPLFF-AVTKEELLQKMIAVLGPLPVQIFQRGKFYSEF 328
BLAST of mRNA_L-elsbetiae_contig538.13587.1 vs. uniprot
Match: A0A7S0NLQ9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NLQ9_9EUKA) HSP 1 Score: 59.3 bits (142), Expect = 1.830e-5 Identity = 33/87 (37.93%), Postives = 45/87 (51.72%), Query Frame = 1
Query: 1 VLMGCPFGPAVDSWSVGVVLLELLIGRPLFDTAGSRAALLRQTVCAFGPMPLRRFRVGHFFSEYY--APDQSLKVGGPIDGHVRMGC 255
V++G P+ P VD WS+G +L+EL G+ LFD S ALL + FGPMP R R G Y+ A + + G + H C
Sbjct: 263 VVLGLPYSPKVDLWSLGCILMELFTGKLLFDNR-SVQALLASHLALFGPMPERLLREGALTEHYFTDAAEAAQMKNGLVGKHESRLC 348
BLAST of mRNA_L-elsbetiae_contig538.13587.1 vs. uniprot
Match: UPI001E1D47BA (uncharacterized protein LOC123535274 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D47BA) HSP 1 Score: 58.2 bits (139), Expect = 6.910e-5 Identity = 27/71 (38.03%), Postives = 42/71 (59.15%), Query Frame = 1
Query: 1 VLMGCPFGPAVDSWSVGVVLLELLIGRPLFDTAGSRAALLRQTVCAFGPMPLRRFRVGHFFSEY--YAPDQ 207
V+ G PFGP +D WS+G +L EL+IG+PLF ++ ++ Q GP P + FR G ++ + Y D+
Sbjct: 250 VMYGVPFGPEIDIWSLGCILAELVIGKPLF-LGITKEEIMEQMTSLLGPFPAKIFRRGKYYKTFRKYTSDE 319
BLAST of mRNA_L-elsbetiae_contig538.13587.1 vs. uniprot
Match: A0A210PP48_MIZYE (Dual specificity tyrosine-phosphorylation-regulated kinase 2 n=2 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210PP48_MIZYE) HSP 1 Score: 58.2 bits (139), Expect = 7.210e-5 Identity = 26/64 (40.62%), Postives = 38/64 (59.38%), Query Frame = 1
Query: 1 VLMGCPFGPAVDSWSVGVVLLELLIGRPLFDTAGSRAALLRQTVCAFGPMPLRRFRVGHFFSEY 192
V+ G PFG +D WS+G +L EL + +PLF S+ +++Q GP P R F+ G F+S Y
Sbjct: 46 VMFGMPFGKEIDMWSLGCILAELYLSKPLF-MGNSKRDIMQQITSLLGPFPGRTFQRGKFYSSY 108 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig538.13587.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig538.13587.1 >prot_L-elsbetiae_contig538.13587.1 ID=prot_L-elsbetiae_contig538.13587.1|Name=mRNA_L-elsbetiae_contig538.13587.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=754bp MGCPFGPAVDSWSVGVVLLELLIGRPLFDTAGSRAALLRQTVCAFGPMPLback to top mRNA from alignment at L-elsbetiae_contig538:20847..24387- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig538.13587.1 ID=mRNA_L-elsbetiae_contig538.13587.1|Name=mRNA_L-elsbetiae_contig538.13587.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3541bp|location=Sequence derived from alignment at L-elsbetiae_contig538:20847..24387- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig538:20847..24387- >mRNA_L-elsbetiae_contig538.13587.1 ID=mRNA_L-elsbetiae_contig538.13587.1|Name=mRNA_L-elsbetiae_contig538.13587.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4524bp|location=Sequence derived from alignment at L-elsbetiae_contig538:20847..24387- (Laminarionema elsbetiae ELsaHSoW15)back to top |