prot_L-elsbetiae_contig5379.13583.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5379.13583.1
Unique Nameprot_L-elsbetiae_contig5379.13583.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length473
Homology
BLAST of mRNA_L-elsbetiae_contig5379.13583.1 vs. uniprot
Match: D8LFM4_ECTSI (Similar to two-pore calcium channel [Arabidopsis thaliana] n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFM4_ECTSI)

HSP 1 Score: 579 bits (1493), Expect = 3.010e-195
Identity = 368/481 (76.51%), Postives = 385/481 (80.04%), Query Frame = 0
Query:    1 RAFEALDQEGTGHITRETVMRLLKTIRPHYRESKRYMMYERIVQSAGLRGRGGGQAAGGRGRVAKEYEAAEVSLVYRRDFCNNVVEALSLKIRTIHERKIASTGQYLVFPLYVWNMAFVVISCAMSPWVFNTGIFWLTLLPTSVLLGSSVLAELVMTGFRAYLILPWNRVKTLSLALTAAGLLWFIFFTSPGDWGSVFKEEGRGKKYMITPSVFAQAGVIFTLFHVYCYLGMALYGGVVTPGVDFGDTPFANSPYYYENNFNSYPEGLVTLFELLVVNNWYVGEGATASG---------YRLFNFSFGSGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRRLSGLPENEEVVPDSPTRLSLEAVKQDLDLGWG--GAEPPDPPPATGGPGGRTRWGSGHYYKVSRRNSYSDRDMFEGGEDEEDVPMKV 470
            RAFEALDQEGTGH+TRE +M LLKTIRPHY ESKRYMMYERIVQSA LRGR     A  RGR  KEYEAAEV+ VYRRDFCNNVVEALSLKIRT+ E+ IASTG YL+ PLYVWNMAFVVISCAMSPWVFNTGIFWLTLLPTS+LLG+SVL ELVMTG RAY ILPWNRVKTLSLALTA+GLLWF+ FTSP DWGSVF  EGRG KYMITPSVFAQAGVIFT+FH+YCYLGMALYGGVVTPG DFGDTPFANSPYYYENNFNSYPEGLVTLFELLVVNN   G  A ASG         Y LF+  F SG              XXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXX                      RLSGLPENEEVVP+SP   SLE  + DLDLGWG  GAEPP+PP    G GGRTRWGSGHYYKVSRRNSYSDRDMFEGGEDEEDVPMK+
Sbjct:  332 RAFEALDQEGTGHVTREKIMTLLKTIRPHYGESKRYMMYERIVQSASLRGR----PAQRRGRAEKEYEAAEVTQVYRRDFCNNVVEALSLKIRTMREQNIASTGLYLLLPLYVWNMAFVVISCAMSPWVFNTGIFWLTLLPTSILLGASVLTELVMTGVRAYFILPWNRVKTLSLALTASGLLWFVAFTSPRDWGSVFT-EGRGNKYMITPSVFAQAGVIFTVFHLYCYLGMALYGGVVTPGADFGDTPFANSPYYYENNFNSYPEGLVTLFELLVVNN--CGSAAEASGGGDGGRDGSYSLFSLRFRSGLLGRSSKGASTSAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATVPAVWFPDPFQQPQQQS-GRLSGLPENEEVVPESPG-ASLEGAR-DLDLGWGKGGAEPPEPPQGVAGHGGRTRWGSGHYYKVSRRNSYSDRDMFEGGEDEEDVPMKI 802          
BLAST of mRNA_L-elsbetiae_contig5379.13583.1 vs. uniprot
Match: A0A6H5L6F8_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6F8_9PHAE)

HSP 1 Score: 278 bits (711), Expect = 9.830e-84
Identity = 211/473 (44.61%), Postives = 229/473 (48.41%), Query Frame = 0
Query:  116 MAFVVISCAMSPWVFNTGIFWLTLLPTSVLLGSSVLAELVMTGFRAYLILPWNRVKTLSLALTAAGLLWFIFFTSPGDWGSVFK-----EEGRGKKYMITPSVFAQAGVIFTLFHVYCYLGMALYGGVVTPGVDFGDTPFANSPYYYENNFNSYPEGLVTLFELLVVNNW------YV--------------------------------------------------------------------------------GEGATAS---------------------GYRLFNFSFGSGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPR----RLSGLPENEEVVPDSPTRLSLEAVKQDLDLGWG--GAEPPDPPPATGGPGGRTRWGSGHYYKVSRRNSYSDRDMFEGGEDEEDVPMKV 470
            MAFVVISCAMSPWVFNTGIFWLTLLPTS+LLG+SVL ELVMTG R           ++ L ++A  L          D G++ +      +     YMITPSVFAQAGVIFT+FH+YCYLGMALYGGVVTPG DFGDTPFANSPYYYENNFNSYPEGLVTLFELLVVNNW      YV                                                                                G  ATA                       Y LF+  F SG                  XXXXXXXXXXXX      M                                            P+    RLSGLPENEEVVP+SP   SLE  + DLDLGWG  GAEPP+PP    G GGRTRWGSGHYYK  RRNSYSDRDMFEG EDEEDVPMK+
Sbjct:    1 MAFVVISCAMSPWVFNTGIFWLTLLPTSILLGASVLTELVMTGIRV----------SIGLLMSARCL----------DLGTLLRLVPAIHDVVSVMYMITPSVFAQAGVIFTVFHLYCYLGMALYGGVVTPGADFGDTPFANSPYYYENNFNSYPEGLVTLFELLVVNNWNMIITGYVHASPLGSWTYLYFLSFITLAVTLALNVLTAIFMTAFTTAAKANTPSVRGGGALSQRSRSENIDEMDDDLGAILAAYDVGGGPAATAGVGSSSGXXXXXXXXXXGGRDGSYGLFSLRFRSG---------LLGRSNKGSXXXXXXXXXXXXLSASGEMPPPPTRPPSAQAAKDAAPGSEASNTADMAAATSPAVRFPDPFQQPQQQSGRLSGLPENEEVVPESPG-ASLEGAR-DLDLGWGKGGAEPPEPPQGVAGHGGRTRWGSGHYYKAGRRNSYSDRDMFEGREDEEDVPMKI 442          
BLAST of mRNA_L-elsbetiae_contig5379.13583.1 vs. uniprot
Match: A0A6H5LE38_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LE38_9PHAE)

HSP 1 Score: 108 bits (270), Expect = 2.150e-21
Identity = 58/75 (77.33%), Postives = 62/75 (82.67%), Query Frame = 0
Query:    1 RAFEALDQEGTGHITRETVMRLLKTIRPHYRESKRYMMYERIVQSAGLRGRGGGQAAGGRGRVAKEYEAAEVSLV 75
            RAFEALDQEGTGH+TRE +M+LLKTIRPHY ESKRYMMYERIVQSA LRGR     A  RGR  KEYEAAEV+ V
Sbjct:  789 RAFEALDQEGTGHVTREKIMKLLKTIRPHYGESKRYMMYERIVQSANLRGR----PAQRRGRAEKEYEAAEVTQV 859          
BLAST of mRNA_L-elsbetiae_contig5379.13583.1 vs. uniprot
Match: A0A7S2V1H1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1H1_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 1.030e-20
Identity = 44/81 (54.32%), Postives = 59/81 (72.84%), Query Frame = 0
Query:  211 PSVFAQAGVIFTLFHVYCYLGMALYGGVVTPGVDFGDTPFANSPYYYENNFNSYPEGLVTLFELLVVNNWYVGEGATASGY 291
            P++ A   V+ T+ HV+CY+GM ++ G++T   D+GD PFA++PYYY NNFN+Y  GLV LFELLVVNNW +     ASGY
Sbjct:   24 PAIMAHGMVMLTVCHVFCYIGMFMWRGLITEDADYGDEPFADAPYYYLNNFNNYMSGLVVLFELLVVNNWNI----IASGY 100          
BLAST of mRNA_L-elsbetiae_contig5379.13583.1 vs. uniprot
Match: A0A7S4D9C3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D9C3_HETAK)

HSP 1 Score: 85.1 bits (209), Expect = 2.320e-14
Identity = 47/89 (52.81%), Postives = 59/89 (66.29%), Query Frame = 0
Query:  212 SVFAQAGVIFTLFHVYCYLGMALYGGVVTPGVDFGDTPFANSPYYYENNFNSYPEGLVTLFELLVVNNWYVGEGATASGYRLFNFSFGS 300
            S++A   VIFT FHV+CY+GMA++GG +    +F   P     +Y+ NNFNSY EGLVT FELLVVNNW V     +SGY  FN S G+
Sbjct:    1 SIYALFLVIFTFFHVFCYVGMAIWGGKINKDTEFSGDPH----FYFLNNFNSYREGLVTAFELLVVNNWNV----VSSGY--FNESKGN 79          
BLAST of mRNA_L-elsbetiae_contig5379.13583.1 vs. uniprot
Match: A0A7S2WC31_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WC31_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 6.890e-12
Identity = 85/323 (26.32%), Postives = 136/323 (42.11%), Query Frame = 0
Query:    1 RAFEALDQEGTGHITRETVMRLLKTIRPHYRESKRYMMYERIVQSAGLRGRGGGQAAGGRGRVAKEYEAAEVSLVYRRDFCNNVVEALSLKIRTIHERKIASTGQYLVFP--LYVWNMAFVVISCAMS-PWVFNTGIFWLTLLPTSVLLGSSVL---AELVMTGFRAYLILPWN---RVKTLSLALTAAGLLWFIFFTSPG---DWGSV----------------------FKEEGRGKKYMITPSVFAQAGVIFTLFHVYCYLGMALYGGVVTPGVDFGDTPFANSPYYYENNFNSYPEGLVTLFELLVVNNWYVGEGATAS 289
            RAF  LD   TG I +ETV+R+L  +RPHY  +K  ++Y  I                         +   +  + R  F   +++AL  ++ +     + + G+ L     L + N+A V++ C  S P     G+  L  LP+ ++ G   +    +++ +G   +    W+    V T+   +  AG+L       PG    W  V                      F   GR     + PS+   A VIF + HVY ++GM  +GG +   +   D      P+Y + NFNSY   LVTLF +L+ NNW+V  G  A+
Sbjct:    6 RAFTLLDPGRTGQIPKETVLRILAQLRPHYDTAKLRVLYSVI-------------------------DWQYLGTINRESF-PRILDALGRRVSS--HPPLNTPGESLEVEDWLLLANLALVLVVCLPSTPGAEPDGLSELWTLPSLLIAGLLFIYSITQILNSGAGHFFRNMWSCLGMVATVGTLVGGAGVL-----AQPGAKSSWLPVVLAGRCMDLLRLLPRTPQCYPFFDAMGR-----VLPSLRGHAAVIFAVMHVYAWIGMVRFGGRINDQLP--DPWLQQDPFYRDLNFNSYGGALVTLFVILIGNNWHVVAGGYAN 288          
BLAST of mRNA_L-elsbetiae_contig5379.13583.1 vs. uniprot
Match: A0A4D9D2R4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D2R4_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 7.680e-11
Identity = 45/106 (42.45%), Postives = 58/106 (54.72%), Query Frame = 0
Query:  186 IFFTSPGDWGSVFKEEGRGKKYMIT-----PSVFAQAGVIFTLFHVYCYLGMALYGGVVTPGVD-FGDTPFANSPYYYENNFNSYPEGLVTLFELLVVNNWYVGEG 285
            + F S  D   +F+        ++      P+   QA VI TL HV+CY+GM +YGG V P    + + PF  +  YY  NFNSY EG+ TLF LLVVNNW V  G
Sbjct:  554 VLFASCCDIARIFETIPEYNALLVVFGNLLPAFLGQAAVILTLMHVFCYIGMNIYGGKVEPTNPLWTEEPFPGN-LYYTLNFNSYVEGMYTLFCLLVVNNWNVISG 658          
BLAST of mRNA_L-elsbetiae_contig5379.13583.1 vs. uniprot
Match: A0A7R9U3R5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3R5_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 2.200e-10
Identity = 35/74 (47.30%), Postives = 49/74 (66.22%), Query Frame = 0
Query:  209 ITPSVFAQAGVIFTLFHVYCYLGMALYGGVVTPGVDFGDTPFANSPYYYENNFNSYPEGLVTLFELLVVNNWYV 282
            + P+VF+Q  V+F L HV+ +LGM ++GG +T    +   P     +YY  NFNSY   LVTLF+LLVVNNW++
Sbjct:  484 VIPAVFSQCQVLFILIHVFAFLGMFIWGGRITAASRYEGDP----AFYYMCNFNSYANSLVTLFDLLVVNNWHI 553          
BLAST of mRNA_L-elsbetiae_contig5379.13583.1 vs. uniprot
Match: K8YQT3_NANGC (Two-pore calcium channel n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YQT3_NANGC)

HSP 1 Score: 72.0 bits (175), Expect = 1.340e-9
Identity = 38/74 (51.35%), Postives = 49/74 (66.22%), Query Frame = 0
Query:  208 MITPSVFAQAGVIFTLFHVYCYLGMALYGGVVTPGVDFGDT-PFANSPYYYENNFNSYPEGLVTLFELLVVNNW 280
            ++ P++ +QA VIF L H+ CY GM L+GG + P      T PF  S YY  N FN+Y EG++TLF LLVVNNW
Sbjct:  629 LLVPALLSQATVIFFLMHLTCYAGMYLFGGRIYPSQPIWATLPFPGSLYYLLN-FNTYREGMLTLFMLLVVNNW 701          
BLAST of mRNA_L-elsbetiae_contig5379.13583.1 vs. uniprot
Match: A0A0L0DDC3_THETB (Two-pore calcium channel 3 n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DDC3_THETB)

HSP 1 Score: 69.7 bits (169), Expect = 6.260e-9
Identity = 52/145 (35.86%), Postives = 76/145 (52.41%), Query Frame = 0
Query:  167 WNRVKTLSLALTAAGLLWFIFFTSPGDWGSVFK------------EEGRGKKYMIT--------PSVFAQAGVIFTLFHVYCYLGMALYGGVVTPG-VDFGDTPFANSPYYYENNFNSYPEGLVTLFELLVVNNWYV-GEGATAS 289
            WNR   L ++LT + ++  + F+S   + +VF+              G  K+Y +         P++   A V F +F VY  LGMAL+GG++  G  D   T FA+S Y+  N+FN      VTLFEL+VVNNW+V  EG  A+
Sbjct:  488 WNRFDFLLVSLTLSDIVVSLAFSS--FFNNVFRYLLLLRVIRLWTTMGEIKRYRVLMSTLWQLLPALATYAVVQFMVFFVYAILGMALFGGLIHDGNPDLAGTVFADSGYFL-NSFNDVGYAYVTLFELMVVNNWHVIAEGYVAA 629          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5379.13583.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFM4_ECTSI3.010e-19576.51Similar to two-pore calcium channel [Arabidopsis t... [more]
A0A6H5L6F8_9PHAE9.830e-8444.61Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5LE38_9PHAE2.150e-2177.33EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A7S2V1H1_9STRA1.030e-2054.32Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S4D9C3_HETAK2.320e-1452.81Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2WC31_9STRA6.890e-1226.32Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A4D9D2R4_9STRA7.680e-1142.45Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7R9U3R5_9STRA2.200e-1047.30Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
K8YQT3_NANGC1.340e-951.35Two-pore calcium channel n=3 Tax=Monodopsidaceae T... [more]
A0A0L0DDC3_THETB6.260e-935.86Two-pore calcium channel 3 n=1 Tax=Thecamonas trah... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR46988FAMILY NOT NAMEDcoord: 209..282
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 159..169
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 208..230
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 189..207
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 170..188
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 129..133
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 106..128
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..105
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 134..158
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 231..472
NoneNo IPR availableTMHMMTMhelixcoord: 173..192
NoneNo IPR availableTMHMMTMhelixcoord: 107..129
NoneNo IPR availableTMHMMTMhelixcoord: 207..229
NoneNo IPR availableTMHMMTMhelixcoord: 144..166
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 1..29
score: 9.157

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5379contigL-elsbetiae_contig5379:967..12593 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5379.13583.1mRNA_L-elsbetiae_contig5379.13583.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5379 967..12593 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5379.13583.1 ID=prot_L-elsbetiae_contig5379.13583.1|Name=mRNA_L-elsbetiae_contig5379.13583.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=473bp
RAFEALDQEGTGHITRETVMRLLKTIRPHYRESKRYMMYERIVQSAGLRG
RGGGQAAGGRGRVAKEYEAAEVSLVYRRDFCNNVVEALSLKIRTIHERKI
ASTGQYLVFPLYVWNMAFVVISCAMSPWVFNTGIFWLTLLPTSVLLGSSV
LAELVMTGFRAYLILPWNRVKTLSLALTAAGLLWFIFFTSPGDWGSVFKE
EGRGKKYMITPSVFAQAGVIFTLFHVYCYLGMALYGGVVTPGVDFGDTPF
ANSPYYYENNFNSYPEGLVTLFELLVVNNWYVGEGATASGYRLFNFSFGS
GKPGGSGSGKGSGGRGGASEAGGRGSGGGGGAGDAGDMPPPPPRPPSKEA
AKESGDAQAAAAAATARFPDPFQQQQQQQQQQPRRLSGLPENEEVVPDSP
TRLSLEAVKQDLDLGWGGAEPPDPPPATGGPGGRTRWGSGHYYKVSRRNS
YSDRDMFEGGEDEEDVPMKVSN*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom