prot_L-elsbetiae_contig5376.13576.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig5376.13576.1
Unique Name	prot_L-elsbetiae_contig5376.13576.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	86

Homology

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BLAST of mRNA_L-elsbetiae_contig5376.13576.1 vs. uniprot
Match: UPI001FCD70BC (cytochrome c553 n=1 Tax=Dixoniella grisea TaxID=35153 RepID=UPI001FCD70BC)

HSP 1 Score: 144 bits (363), Expect = 4.460e-43
Identity = 66/84 (78.57%), Postives = 75/84 (89.29%), Query Frame = 0

Query:    1 DIQNGEGIFTANCTACHAGGNNVVMIDKTLQKEALVKNEMNSIKAIMYQVTNGKNAMPAFGGRLSDTDIEDAANYVLGKSEAGW 84
            DI++GE IFTANC+ACHAGGNNV+M +KTL+K+AL  N MNS+ AI YQVTNGKNAMPAFGGRLSDTDIED ANYVLG+SE GW
Sbjct:   24 DIEHGEQIFTANCSACHAGGNNVIMPEKTLKKDALEANSMNSVNAIKYQVTNGKNAMPAFGGRLSDTDIEDVANYVLGQSEQGW 107

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BLAST of mRNA_L-elsbetiae_contig5376.13576.1 vs. uniprot
Match: A0A8F0JZA5_9PHAE (Cytochrome c6 n=2 Tax=Ecklonia TaxID=105406 RepID=A0A8F0JZA5_9PHAE)

HSP 1 Score: 144 bits (363), Expect = 4.740e-43
Identity = 65/85 (76.47%), Postives = 76/85 (89.41%), Query Frame = 0

Query:    1 DIQNGEGIFTANCTACHAGGNNVVMIDKTLQKEALVKNEMNSIKAIMYQVTNGKNAMPAFGGRLSDTDIEDAANYVLGKSEAGWD 85
            DI NG  IFTANC+ACHAGGNNV+MI+KTL+K+AL  N+MNS+KAI YQVTNGKNAMPAFGGRL+++DIED AN+VL KSE GWD
Sbjct:   26 DINNGGNIFTANCSACHAGGNNVIMIEKTLKKDALSDNQMNSVKAITYQVTNGKNAMPAFGGRLAESDIEDVANFVLSKSEEGWD 110

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BLAST of mRNA_L-elsbetiae_contig5376.13576.1 vs. uniprot
Match: CYC6_BUMFI (Cytochrome c6 n=1 Tax=Bumilleriopsis filiformis TaxID=2835 RepID=CYC6_BUMFI)

HSP 1 Score: 142 bits (357), Expect = 1.890e-42
Identity = 65/85 (76.47%), Postives = 74/85 (87.06%), Query Frame = 0

Query:    1 DIQNGEGIFTANCTACHAGGNNVVMIDKTLQKEALVKNEMNSIKAIMYQVTNGKNAMPAFGGRLSDTDIEDAANYVLGKSEAGWD 85
            DI+NGE IFTANC ACHAGGNNV+M +KTL+K+AL  N MN++ AI YQVTNGKNAMPAFGGRLSD+DIED ANYVL +SE GWD
Sbjct:    2 DIENGERIFTANCAACHAGGNNVIMPEKTLKKDALEANGMNAVSAITYQVTNGKNAMPAFGGRLSDSDIEDVANYVLSQSEQGWD 86

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BLAST of mRNA_L-elsbetiae_contig5376.13576.1 vs. uniprot
Match: CYC6_PETFA (Cytochrome c6 n=1 Tax=Petalonia fascia TaxID=2893 RepID=CYC6_PETFA)

HSP 1 Score: 141 bits (355), Expect = 3.700e-42
Identity = 62/84 (73.81%), Postives = 76/84 (90.48%), Query Frame = 0

Query:    1 DIQNGEGIFTANCTACHAGGNNVVMIDKTLQKEALVKNEMNSIKAIMYQVTNGKNAMPAFGGRLSDTDIEDAANYVLGKSEAGW 84
            DI NGE +FTANC+ACHAGGNNV+M +KTL+K+AL +NEMN+IK+I YQVTNGKNAMPAFGGRLS+TDIED AN+V+ +S+ GW
Sbjct:    2 DINNGESVFTANCSACHAGGNNVIMPEKTLKKDALEENEMNNIKSITYQVTNGKNAMPAFGGRLSETDIEDVANFVISQSQKGW 85

[Close]

BLAST of mRNA_L-elsbetiae_contig5376.13576.1 vs. uniprot
Match: A0A8F0JYE6_9PHAE (Cytochrome c6 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0JYE6_9PHAE)

HSP 1 Score: 141 bits (355), Expect = 7.860e-42
Identity = 64/84 (76.19%), Postives = 72/84 (85.71%), Query Frame = 0

Query:    1 DIQNGEGIFTANCTACHAGGNNVVMIDKTLQKEALVKNEMNSIKAIMYQVTNGKNAMPAFGGRLSDTDIEDAANYVLGKSEAGW 84
            DI NGE IFTANC+ACHAGGNN +M DKTL+K+AL  N+MNS+ AI YQVTNGKNAMPAFGGRL DTDIED AN+VL +SE GW
Sbjct:   26 DINNGENIFTANCSACHAGGNNAIMPDKTLKKDALSGNQMNSVSAITYQVTNGKNAMPAFGGRLGDTDIEDVANFVLSQSEKGW 109

[Close]

BLAST of mRNA_L-elsbetiae_contig5376.13576.1 vs. uniprot
Match: UPI001FCCE0AC (cytochrome c553 n=1 Tax=Pulvinaster venetus TaxID=427767 RepID=UPI001FCCE0AC)

HSP 1 Score: 140 bits (353), Expect = 1.580e-41
Identity = 66/84 (78.57%), Postives = 72/84 (85.71%), Query Frame = 0

Query:    1 DIQNGEGIFTANCTACHAGGNNVVMIDKTLQKEALVKNEMNSIKAIMYQVTNGKNAMPAFGGRLSDTDIEDAANYVLGKSEAGW 84
            DI NGE IFTANCTACHAGGNNV+M DKTL+KEAL + +MNS  AI+ QVTNGKNAMPAFGGRLSD DIED ANYVL +SE GW
Sbjct:   27 DIANGETIFTANCTACHAGGNNVIMADKTLKKEALAEYKMNSTNAIITQVTNGKNAMPAFGGRLSDNDIEDVANYVLAQSEQGW 110

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BLAST of mRNA_L-elsbetiae_contig5376.13576.1 vs. uniprot
Match: A0A0R6LUL8_UNDPI (Cytochrome c6 n=1 Tax=Undaria pinnatifida TaxID=74381 RepID=A0A0R6LUL8_UNDPI)

HSP 1 Score: 140 bits (352), Expect = 2.180e-41
Identity = 65/85 (76.47%), Postives = 75/85 (88.24%), Query Frame = 0

Query:    1 DIQNGEGIFTANCTACHAGGNNVVMIDKTLQKEALVKNEMNSIKAIMYQVTNGKNAMPAFGGRLSDTDIEDAANYVLGKSEAGWD 85
            DI NGE IFTANC+ACHAGGNNV+MIDKTL+K+AL KN+MNS+ AI YQVTNGKNAMPAFGGRLS+ DIED AN+V+ KS+  WD
Sbjct:   26 DISNGENIFTANCSACHAGGNNVIMIDKTLKKDALDKNQMNSVSAITYQVTNGKNAMPAFGGRLSEPDIEDVANFVISKSDK-WD 109

[Close]

BLAST of mRNA_L-elsbetiae_contig5376.13576.1 vs. uniprot
Match: A0A8E5XRM0_9PHAE (Cytochrome c6 n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRM0_9PHAE)

HSP 1 Score: 139 bits (351), Expect = 3.200e-41
Identity = 62/85 (72.94%), Postives = 74/85 (87.06%), Query Frame = 0

Query:    1 DIQNGEGIFTANCTACHAGGNNVVMIDKTLQKEALVKNEMNSIKAIMYQVTNGKNAMPAFGGRLSDTDIEDAANYVLGKSEAGWD 85
            DI NGE +FTANC+ACHAGGNNV+M +KTL+K+AL  N+MN++ AI YQVTNGKNAMPAFGGRL+DTDIED AN+VL +SE  WD
Sbjct:   26 DINNGESVFTANCSACHAGGNNVIMPEKTLKKDALSTNQMNTVSAITYQVTNGKNAMPAFGGRLADTDIEDVANFVLSQSEKDWD 110

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BLAST of mRNA_L-elsbetiae_contig5376.13576.1 vs. uniprot
Match: A0A6G6D7E1_ECTSI (Cytochrome c6 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=A0A6G6D7E1_ECTSI)

HSP 1 Score: 139 bits (351), Expect = 3.200e-41
Identity = 63/85 (74.12%), Postives = 72/85 (84.71%), Query Frame = 0

Query:    1 DIQNGEGIFTANCTACHAGGNNVVMIDKTLQKEALVKNEMNSIKAIMYQVTNGKNAMPAFGGRLSDTDIEDAANYVLGKSEAGWD 85
            DI NGE +F ANC+ACHAGGNNV+M +KTL+KEAL  N MNS+ AI YQVTNGKNAMPAFGGRLS+ DIED AN+VL K+E GWD
Sbjct:   26 DINNGESVFVANCSACHAGGNNVIMPEKTLRKEALGANNMNSVNAITYQVTNGKNAMPAFGGRLSEPDIEDVANFVLSKAEGGWD 110

[Close]

BLAST of mRNA_L-elsbetiae_contig5376.13576.1 vs. uniprot
Match: A0A3R5V2H6_9STRA (Cytochrome c6 n=1 Tax=Pseudellipsoidion edaphicum TaxID=1431838 RepID=A0A3R5V2H6_9STRA)

HSP 1 Score: 138 bits (348), Expect = 9.450e-41
Identity = 63/85 (74.12%), Postives = 74/85 (87.06%), Query Frame = 0

Query:    1 DIQNGEGIFTANCTACHAGGNNVVMIDKTLQKEALVKNEMNSIKAIMYQVTNGKNAMPAFGGRLSDTDIEDAANYVLGKSEAGWD 85
            DI+NGE IF+ANC+ACHAGGNNV++ +KTL+KEAL  N MNS+ AI YQVTNGKNAMPAFGGRL D+DIED ANYVL +SE GW+
Sbjct:   27 DIENGERIFSANCSACHAGGNNVIIPEKTLKKEALEANGMNSVNAITYQVTNGKNAMPAFGGRLDDSDIEDVANYVLSQSEKGWE 111

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig5376.13576.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig5376.13576.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
UPI001FCD70BC	4.460e-43	78.57	cytochrome c553 n=1 Tax=Dixoniella grisea TaxID=35...	[more]
A0A8F0JZA5_9PHAE	4.740e-43	76.47	Cytochrome c6 n=2 Tax=Ecklonia TaxID=105406 RepID=...	[more]
CYC6_BUMFI	1.890e-42	76.47	Cytochrome c6 n=1 Tax=Bumilleriopsis filiformis Ta...	[more]
CYC6_PETFA	3.700e-42	73.81	Cytochrome c6 n=1 Tax=Petalonia fascia TaxID=2893 ...	[more]
A0A8F0JYE6_9PHAE	7.860e-42	76.19	Cytochrome c6 n=1 Tax=Protohalopteris sp. TaxID=28...	[more]
UPI001FCCE0AC	1.580e-41	78.57	cytochrome c553 n=1 Tax=Pulvinaster venetus TaxID=...	[more]
A0A0R6LUL8_UNDPI	2.180e-41	76.47	Cytochrome c6 n=1 Tax=Undaria pinnatifida TaxID=74...	[more]
A0A8E5XRM0_9PHAE	3.200e-41	72.94	Cytochrome c6 n=1 Tax=Ishige okamurae TaxID=233772...	[more]
A0A6G6D7E1_ECTSI	3.200e-41	74.12	Cytochrome c6 n=1 Tax=Ectocarpus siliculosus TaxID...	[more]
A0A3R5V2H6_9STRA	9.450e-41	74.12	Cytochrome c6 n=1 Tax=Pseudellipsoidion edaphicum ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008168	Cytochrome c, class IC	PRINTS	PR00605	CYTCHROMECIC	coord: 11..22 score: 55.0 coord: 54..76 score: 51.3
IPR036909	Cytochrome c-like domain superfamily	GENE3D	1.10.760.10		coord: 1..85 e-value: 2.3E-33 score: 116.6
IPR036909	Cytochrome c-like domain superfamily	SUPERFAMILY	46626	Cytochrome c	coord: 1..84
IPR009056	Cytochrome c-like domain	PFAM	PF13442	Cytochrome_CBB3	coord: 2..76 e-value: 3.2E-16 score: 59.4
IPR009056	Cytochrome c-like domain	PROSITE	PS51007	CYTC	coord: 1..80 score: 12.957
None	No IPR available	PANTHER	PTHR34688:SF2	CYTOCHROME C6, CHLOROPLASTIC	coord: 1..85
None	No IPR available	PANTHER	PTHR34688	FAMILY NOT NAMED	coord: 1..85

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig5376	contig	L-elsbetiae_contig5376:2091..2348 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig5376.13576.1	mRNA_L-elsbetiae_contig5376.13576.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig5376 2091..2348 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig5376.13576.1 ID=prot_L-elsbetiae_contig5376.13576.1|Name=mRNA_L-elsbetiae_contig5376.13576.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=86bp
DIQNGEGIFTANCTACHAGGNNVVMIDKTLQKEALVKNEMNSIKAIMYQV
TNGKNAMPAFGGRLSDTDIEDAANYVLGKSEAGWD*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR008168	Cyt_C_IC
IPR036909	Cyt_c-like_dom_sf
IPR009056	Cyt_c-like_dom