Homology
BLAST of mRNA_L-elsbetiae_contig5355.13538.1 vs. uniprot
Match:
D8LDE8_ECTSI (RNA pseudouridylate synthase domain-containing protein (C-terminal) RNA pseudouridylate synthase dom n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDE8_ECTSI)
HSP 1 Score: 129 bits (323), Expect = 2.240e-33
Identity = 70/127 (55.12%), Postives = 78/127 (61.42%), Query Frame = 0
Query: 1 MVHKIRNELVTRHEPEGRATVFNRLAKLEMPDTLMPL-----------------------------------------ITEEELSGMRSGCTIDGVRYKGMFVRVGTGGGKGTGGRNAWLTIKCTEG 86
MVHK+RNELVTRH+PEGR TVF+RL KL++PDTLMP+ ITEE+L MRSGCTIDGVRYKGMFVRV GGGKG GRNAWLTI+CTEG
Sbjct: 196 MVHKMRNELVTRHDPEGRPTVFDRLTKLKLPDTLMPVGRLDYNTEGLLLLTNDGDLARKMELPSSNIVRTYSVRVYGNITEEKLRAMRSGCTIDGVRYKGMFVRVEGGGGKGREGRNAWLTIECTEG 322
BLAST of mRNA_L-elsbetiae_contig5355.13538.1 vs. uniprot
Match:
A0A6H5J790_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J790_9PHAE)
HSP 1 Score: 78.2 bits (191), Expect = 5.820e-16
Identity = 36/41 (87.80%), Postives = 37/41 (90.24%), Query Frame = 0
Query: 46 MRSGCTIDGVRYKGMFVRVGTGGGKGTGGRNAWLTIKCTEG 86
MRSGCTIDGVRYKGMFVRV GGGKG GRNAWLTI+CTEG
Sbjct: 1 MRSGCTIDGVRYKGMFVRVEGGGGKGREGRNAWLTIECTEG 41
BLAST of mRNA_L-elsbetiae_contig5355.13538.1 vs. uniprot
Match:
A0A6H5J9J6_9PHAE (S4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9J6_9PHAE)
HSP 1 Score: 64.7 bits (156), Expect = 2.280e-10
Identity = 29/37 (78.38%), Postives = 35/37 (94.59%), Query Frame = 0
Query: 1 MVHKIRNELVTRHEPEGRATVFNRLAKLEMPDTLMPL 37
MVHK+RNELVTR +PEGR TVF+RLAKL++PDTLMP+
Sbjct: 214 MVHKMRNELVTRDDPEGRPTVFDRLAKLKLPDTLMPV 250
BLAST of mRNA_L-elsbetiae_contig5355.13538.1 vs. uniprot
Match:
A0A7S2KG34_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KG34_9STRA)
HSP 1 Score: 51.2 bits (121), Expect = 1.670e-5
Identity = 27/49 (55.10%), Postives = 32/49 (65.31%), Query Frame = 0
Query: 38 ITEEELSGMRSGCTIDGVRYKGMFVRVGTGGGKGTGGRNAWLTIKCTEG 86
+T +LS +R G I+GVRYKGM VR+ G GG N WL IKCTEG
Sbjct: 199 LTFGKLSAIRRGVEINGVRYKGMDVRIE--GNLKKGGTNTWLQIKCTEG 245
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5355.13538.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 4
M V H K I R N E L V T R H E P E G R A T V F N R L A K L E M P D T L M P L I T E E E L S G M R S G C T I D G V R Y K G M F V R V G T G G G K G T G G R N A W L T I K C T E G * 10 20 30 40 50 60 70 80 Expect = 2.24e-33 / Id = 55.12 Expect = 5.82e-16 / Id = 87.80 Expect = 2.28e-10 / Id = 78.38 Expect = 1.67e-5 / Id = 55.10 Sequence D8LDE8_ECTSI A0A6H5J790_9PHAE A0A6H5J9J6_9PHAE A0A7S2KG34_9STRA back to top
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_L-elsbetiae_contig5355.13538.1 ID=prot_L-elsbetiae_contig5355.13538.1|Name=mRNA_L-elsbetiae_contig5355.13538.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=87bp back to top