mRNA_L-elsbetiae_contig5352.13534.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5352.13534.1 vs. uniprot
Match: D7FNV2_ECTSI (Rab1B, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNV2_ECTSI) HSP 1 Score: 276 bits (706), Expect = 7.140e-93 Identity = 140/142 (98.59%), Postives = 142/142 (100.00%), Query Frame = 1 Query: 19 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQPTGAPRGGTRLTASTQVNGAGAGGGCC 444 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQPTGAPRGGTRLTASTQV+GAG+GGGCC Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQPTGAPRGGTRLTASTQVSGAGSGGGCC 203
BLAST of mRNA_L-elsbetiae_contig5352.13534.1 vs. uniprot
Match: A0A835YQS3_9STRA (Ras related protein PiYpt1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQS3_9STRA) HSP 1 Score: 235 bits (600), Expect = 1.020e-76 Identity = 119/143 (83.22%), Postives = 128/143 (89.51%), Query Frame = 1 Query: 19 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQPTGAPRGGTRLTASTQVNGAGAGG-GCC 444 WDTAGQERFRTIT+SYYRGAHGIIVVYDVTD+ESFNNVKQWL EI+RYACENVNKLLVGNKSDLEAKRAVTTEE K FAD++GIEFLETSAKNA NVEKAF+MM+ QIK RMK+ P G +GGTRLTA QV G GAGG GCC Sbjct: 62 WDTAGQERFRTITASYYRGAHGIIVVYDVTDRESFNNVKQWLTEIERYACENVNKLLVGNKSDLEAKRAVTTEEGKEFADSIGIEFLETSAKNADNVEKAFLMMSQQIKGRMKTAPAGGAKGGTRLTAGEQVGGGGAGGSGCC 204
BLAST of mRNA_L-elsbetiae_contig5352.13534.1 vs. uniprot
Match: A0A836CKR4_9STRA (Ras related protein PiYpt1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKR4_9STRA) HSP 1 Score: 234 bits (598), Expect = 1.980e-76 Identity = 116/142 (81.69%), Postives = 127/142 (89.44%), Query Frame = 1 Query: 19 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQPTGAPRGGTRLTASTQVNGAGAGGGCC 444 WDTAGQERFRTITSSYYRGAHGIIVVYDVTD++SF NVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAK FAD+LGIEFLETSAKNA+NV+ AFM M++ IK RMK+QPT +GGT+LT S QV+G GGCC Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDRDSFQNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKEFADSLGIEFLETSAKNATNVDSAFMTMSAAIKGRMKTQPTAGAKGGTKLTPSAQVSGGATSGGCC 203
BLAST of mRNA_L-elsbetiae_contig5352.13534.1 vs. uniprot
Match: W7TST3_9STRA (Rab family gtpase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TST3_9STRA) HSP 1 Score: 229 bits (584), Expect = 2.670e-74 Identity = 116/142 (81.69%), Postives = 126/142 (88.73%), Query Frame = 1 Query: 19 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQPTGAPRGGTRLTASTQVNGAGAGGGCC 444 WDTAGQERFRTITSSYYRGAHGIIVVYDVTD+ESFNNVKQWLHEI+RYA ENVNKLLVGNKSDLE KR V+TE AK FAD+LGI FLETSAKN++NVEKAF+ MASQIK+RMK+QP G GGT+LTAST V G GA GCC Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEINRYASENVNKLLVGNKSDLEPKRVVSTETAKEFADSLGIAFLETSAKNSTNVEKAFLTMASQIKARMKTQPVGPKTGGTKLTASTAVGGPGASSGCC 203
BLAST of mRNA_L-elsbetiae_contig5352.13534.1 vs. uniprot
Match: A0A812YRD8_SYMMI (RAB1A protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812YRD8_SYMMI) HSP 1 Score: 218 bits (556), Expect = 1.070e-70 Identity = 116/144 (80.56%), Postives = 127/144 (88.19%), Query Frame = 1 Query: 19 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQP--TGAPRGGTRLTASTQVNGAGAGGGCC 444 WDTAGQERFRTITSSYYRGAHGIIVVYDVTD ESFNNVKQWLHEIDRYA ENVNKLLVGNKSDL +KRAVT E+ K FAD+LGIEFLETSAKNA+NVEKAFM MA+QIKSRMK+QP + AP+G T+LTA + V+G GGCC Sbjct: 17 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDAESFNNVKQWLHEIDRYASENVNKLLVGNKSDLTSKRAVTFEQGKEFADSLGIEFLETSAKNATNVEKAFMTMAAQIKSRMKAQPANSAAPKG-TKLTAGSAVSGGN--GGCC 157
BLAST of mRNA_L-elsbetiae_contig5352.13534.1 vs. uniprot
Match: YPT1_PHYIN (Ras-like GTP-binding protein YPT1 n=22 Tax=Oomycota TaxID=4762 RepID=YPT1_PHYIN) HSP 1 Score: 214 bits (546), Expect = 1.510e-68 Identity = 112/142 (78.87%), Postives = 122/142 (85.92%), Query Frame = 1 Query: 19 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQPTGAPRGGTRLTASTQVNGAGAGGGCC 444 WDTAGQERFRTITSSYYRGAHGIIVVYDVTD+ESFNNVKQWLHEIDRYACENVNKLLVGNKSDL AKR V+T+ AK FA++LGIEFLETSAKNA+NVEKAFMMMA+QIK RM + P AP+ G +LT QV G G CC Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLTAKRVVSTDAAKEFAESLGIEFLETSAKNAANVEKAFMMMAAQIKKRMANAPV-APKAGVKLTPGQQVPSNG-GSKCC 201
BLAST of mRNA_L-elsbetiae_contig5352.13534.1 vs. uniprot
Match: K3W769_GLOUD (Uncharacterized protein n=4 Tax=Oomycota TaxID=4762 RepID=K3W769_GLOUD) HSP 1 Score: 214 bits (545), Expect = 2.140e-68 Identity = 113/142 (79.58%), Postives = 122/142 (85.92%), Query Frame = 1 Query: 19 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQPTGAPRGGTRLTASTQVNGAGAGGGCC 444 WDTAGQERFRTITSSYYRGAHGIIVVYDVTD+ESFNNVKQWLHEIDRYACENVNKLLVGNKSDL AKR V+TE AK FA++LGIEFLETSAKNA+NVEKAFMMMA+QIK RM + PT AP+ +L T V G GG CC Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLTAKRVVSTEAAKEFAESLGIEFLETSAKNAANVEKAFMMMAAQIKKRMANAPT-APKPTLKLNQGTNVQQNG-GGKCC 201
BLAST of mRNA_L-elsbetiae_contig5352.13534.1 vs. uniprot
Match: A0A140YWP8_PHYNI (Ras-related protein (Fragment) n=4 Tax=Peronosporaceae TaxID=4777 RepID=A0A140YWP8_PHYNI) HSP 1 Score: 213 bits (542), Expect = 5.040e-68 Identity = 107/132 (81.06%), Postives = 118/132 (89.39%), Query Frame = 1 Query: 19 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQPTGAPRGGTRLTASTQV 414 WDTAGQERFRTITSSYYRGAHGIIVVYDVTD+ESFNNVKQWLHEIDRYACENVNKLLVGNKSDL AKR V+T+ AK FA++LGIEFLETSA+NA+NVEKAFMMMA+QIK RM + P AP+ G +LT QV Sbjct: 57 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLTAKRVVSTDAAKEFAESLGIEFLETSARNAANVEKAFMMMAAQIKKRMANAPV-APKAGVKLTPGQQV 187
BLAST of mRNA_L-elsbetiae_contig5352.13534.1 vs. uniprot
Match: A0A140YWQ0_PHYNI (Ras-related protein (Fragment) n=4 Tax=Phytophthora TaxID=4783 RepID=A0A140YWQ0_PHYNI) HSP 1 Score: 212 bits (539), Expect = 1.440e-67 Identity = 107/132 (81.06%), Postives = 117/132 (88.64%), Query Frame = 1 Query: 19 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQPTGAPRGGTRLTASTQV 414 WDTAGQERFRTITSSYYRGAHGIIVVYDVTD+ESFNNVKQWLHEIDRYACENVNKLLVGNKSDL AKR V+T+ A+ FA++LGIEFLETSAKNA+NVEKAFMMMA+QIK RM + P APR G +LT V Sbjct: 57 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLTAKRVVSTDAAQEFAESLGIEFLETSAKNAANVEKAFMMMAAQIKKRMANAPV-APRAGVKLTPGQHV 187
BLAST of mRNA_L-elsbetiae_contig5352.13534.1 vs. uniprot
Match: A0A6A3UIH2_9STRA (Ras-like GTP-binding protein n=90 Tax=Phytophthora TaxID=4783 RepID=A0A6A3UIH2_9STRA) HSP 1 Score: 214 bits (545), Expect = 1.960e-67 Identity = 108/132 (81.82%), Postives = 118/132 (89.39%), Query Frame = 1 Query: 19 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQPTGAPRGGTRLTASTQV 414 WDTAGQERFRTITSSYYRGAHGIIVVYDVTD+ESFNNVKQWLHEIDRYACENVNKLLVGNKSDL AKR V+T+ AK FA++LGIEFLETSAKNA+NVEKAFMMMA+QIK RM + P AP+ G +LT QV Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLTAKRVVSTDAAKEFAESLGIEFLETSAKNAANVEKAFMMMAAQIKKRMANAPV-APKAGVKLTPGQQV 192 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5352.13534.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5352.13534.1 >prot_L-elsbetiae_contig5352.13534.1 ID=prot_L-elsbetiae_contig5352.13534.1|Name=mRNA_L-elsbetiae_contig5352.13534.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=149bp MHFLLQWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEback to top mRNA from alignment at L-elsbetiae_contig5352:149..2038+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5352.13534.1 ID=mRNA_L-elsbetiae_contig5352.13534.1|Name=mRNA_L-elsbetiae_contig5352.13534.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1890bp|location=Sequence derived from alignment at L-elsbetiae_contig5352:149..2038+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5352:149..2038+ >mRNA_L-elsbetiae_contig5352.13534.1 ID=mRNA_L-elsbetiae_contig5352.13534.1|Name=mRNA_L-elsbetiae_contig5352.13534.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=894bp|location=Sequence derived from alignment at L-elsbetiae_contig5352:149..2038+ (Laminarionema elsbetiae ELsaHSoW15)back to top |