prot_L-elsbetiae_contig5340.13521.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5340.13521.1
Unique Nameprot_L-elsbetiae_contig5340.13521.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length232
Homology
BLAST of mRNA_L-elsbetiae_contig5340.13521.1 vs. uniprot
Match: D8LKB4_ECTSI (CBFD_NFYB_HMF domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKB4_ECTSI)

HSP 1 Score: 195 bits (496), Expect = 5.490e-59
Identity = 102/103 (99.03%), Postives = 102/103 (99.03%), Query Frame = 0
Query:    1 PPQACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYLDQYRREASAKKQSKAAMGAPGPA 103
            PPQACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYLDQYRREASAKKQSKAAMGA GPA
Sbjct:   11 PPQACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYLDQYRREASAKKQSKAAMGAAGPA 113          
BLAST of mRNA_L-elsbetiae_contig5340.13521.1 vs. uniprot
Match: A0A6V1RK43_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RK43_HETAK)

HSP 1 Score: 132 bits (333), Expect = 2.150e-35
Identity = 62/81 (76.54%), Postives = 75/81 (92.59%), Query Frame = 0
Query:    1 PPQACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYLD 81
            PPQAC+QR++K+VLPDN+QIGKDAKAAF+R+AGIFIMYLTACANDFCRE+KRQTI+  DVM AI ELEF +L EPLK++L+
Sbjct:   38 PPQACIQRIVKAVLPDNIQIGKDAKAAFARAAGIFIMYLTACANDFCRESKRQTITGPDVMMAISELEFHDLVEPLKDFLE 118          
BLAST of mRNA_L-elsbetiae_contig5340.13521.1 vs. uniprot
Match: A0A7S2SN07_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SN07_9STRA)

HSP 1 Score: 129 bits (323), Expect = 3.230e-33
Identity = 64/96 (66.67%), Postives = 79/96 (82.29%), Query Frame = 0
Query:    1 PPQACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYLDQYRREASAKKQSKAA 96
            PPQACVQR+IKS LPDN QI K++KAAFS++AGIFI+YLT CANDFC+E KR TIS+ DVM A++ELEF +L  PL+E+L  YR++AS KK   AA
Sbjct:   73 PPQACVQRIIKSALPDNCQITKESKAAFSKAAGIFIIYLTTCANDFCKENKRSTISSADVMSAMRELEFHDLMGPLEEFLTNYRKDASTKKDGVAA 168          
BLAST of mRNA_L-elsbetiae_contig5340.13521.1 vs. uniprot
Match: A0A7S2DWQ9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DWQ9_9STRA)

HSP 1 Score: 119 bits (299), Expect = 8.380e-30
Identity = 57/92 (61.96%), Postives = 76/92 (82.61%), Query Frame = 0
Query:    1 PPQACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYLDQYRREASAKKQ 92
            PP ACVQR+IK VLPD+ QI K++K AFS++AGIFI+YLT CANDFC+E KR TIS+ DV+ A++ELEF +L  PL+E+L  YR++ +AKK+
Sbjct:   26 PPMACVQRIIKGVLPDSCQITKESKTAFSKAAGIFIIYLTTCANDFCKEGKRSTISSADVLAALRELEFHDLIGPLEEFLAHYRQDTNAKKE 117          
BLAST of mRNA_L-elsbetiae_contig5340.13521.1 vs. uniprot
Match: A0A7S3HH50_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HH50_9STRA)

HSP 1 Score: 112 bits (279), Expect = 1.020e-27
Identity = 52/91 (57.14%), Postives = 73/91 (80.22%), Query Frame = 0
Query:    1 PPQACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYLDQYRREASAKK 91
            PP ACV RV+K+ LP+N+ + KDA+AAF R+AGIFI YLT C+NDFCRE+KR TI  QDVM A++EL F + E+PL+E+L+ Y++++  +K
Sbjct:   18 PPMACVSRVMKAALPENILLTKDARAAFVRAAGIFIFYLTHCSNDFCRESKRATIFPQDVMAALRELGFEDFEKPLEEFLEAYKKDSEQRK 108          
BLAST of mRNA_L-elsbetiae_contig5340.13521.1 vs. uniprot
Match: A0A7S2WSI8_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WSI8_9STRA)

HSP 1 Score: 112 bits (280), Expect = 8.720e-27
Identity = 54/98 (55.10%), Postives = 74/98 (75.51%), Query Frame = 0
Query:    1 PPQACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYLDQYRREASAKKQSKAAMG 98
            PP ACV+R++KS LP +  +GKDA +AF+R+ GIF++YLTACANDF RE KRQTI+A D+M +IKEL+F E    L  +L+Q+R+E   K++ K A G
Sbjct:   35 PPLACVRRLLKSSLPTSTNVGKDASSAFARACGIFVIYLTACANDFARENKRQTITANDIMASIKELDFDEFTPQLTGFLEQHRKEEKEKRERKKASG 132          
BLAST of mRNA_L-elsbetiae_contig5340.13521.1 vs. uniprot
Match: A0A1E7FAU9_9STRA (CBFD_NFYB_HMF domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FAU9_9STRA)

HSP 1 Score: 106 bits (264), Expect = 4.720e-26
Identity = 54/94 (57.45%), Postives = 68/94 (72.34%), Query Frame = 0
Query:    2 PQACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYLDQYRREASAKKQSKA 95
            P ACV+R++K  LP +  +GKDA AAF+R++GIFI+YLTACANDF RE +RQTI+A DV+ AIKELEF E    L  +L+ YR     KK  KA
Sbjct:    1 PVACVRRILKKTLPSSSNVGKDAVAAFARASGIFIIYLTACANDFARENRRQTITANDVLAAIKELEFDEFSPELTSFLEGYREAEKNKKDVKA 94          
BLAST of mRNA_L-elsbetiae_contig5340.13521.1 vs. uniprot
Match: A0A7S1UNS2_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UNS2_9STRA)

HSP 1 Score: 109 bits (272), Expect = 4.860e-26
Identity = 50/96 (52.08%), Postives = 72/96 (75.00%), Query Frame = 0
Query:    1 PPQACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYLDQYRREASAKKQSKAA 96
            PP AC++R++K  LP +  +GKDA AAF+R+ GIF++Y+TACANDF  E +RQTI+A DV+ A+KEL+F E    LK +L+ YR    +K+++KAA
Sbjct:   22 PPLACIRRILKHALPSSTNVGKDASAAFARACGIFVIYITACANDFAHENRRQTITANDVLAALKELDFDEFTPQLKTFLENYRAAEKSKREAKAA 117          
BLAST of mRNA_L-elsbetiae_contig5340.13521.1 vs. uniprot
Match: A0A6U9ZNZ1_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A6U9ZNZ1_9STRA)

HSP 1 Score: 111 bits (277), Expect = 6.200e-26
Identity = 56/96 (58.33%), Postives = 72/96 (75.00%), Query Frame = 0
Query:    1 PPQACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYLDQYRREASAKKQSKAA 96
            PP ACV+R++K  LP +  +GKDA AAF+R++GIFI+YLTACANDF RE +RQTI+A DV+ AIKELEF E    L  +L++YR     KK +KAA
Sbjct:   47 PPVACVRRILKQTLPSSSNVGKDAVAAFARASGIFIIYLTACANDFARENRRQTITANDVLAAIKELEFDEFAPELSTFLERYRELEKNKKDAKAA 142          
BLAST of mRNA_L-elsbetiae_contig5340.13521.1 vs. uniprot
Match: A0A7S1D791_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D791_CYCTE)

HSP 1 Score: 108 bits (271), Expect = 8.580e-26
Identity = 49/95 (51.58%), Postives = 74/95 (77.89%), Query Frame = 0
Query:    1 PPQACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYLDQYRREASAKKQSKA 95
            PP ACV+R++K+ LP +  +GKDA AAF+R+ GIF++Y+TACANDF RE++RQTI+A DV+ ++KEL+F E    L+ +LD++R    +K+ +KA
Sbjct:   34 PPLACVRRILKNALPSSTNVGKDASAAFARACGIFVIYITACANDFARESRRQTITANDVLASVKELDFDEFSPHLEAFLDRHRAAEKSKRDAKA 128          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5340.13521.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKB4_ECTSI5.490e-5999.03CBFD_NFYB_HMF domain-containing protein n=1 Tax=Ec... [more]
A0A6V1RK43_HETAK2.150e-3576.54Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2SN07_9STRA3.230e-3366.67Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2DWQ9_9STRA8.380e-3061.96Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S3HH50_9STRA1.020e-2757.14Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7S2WSI8_9STRA8.720e-2755.10Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A1E7FAU9_9STRA4.720e-2657.45CBFD_NFYB_HMF domain-containing protein (Fragment)... [more]
A0A7S1UNS2_9STRA4.860e-2652.08Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A6U9ZNZ1_9STRA6.200e-2658.33Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7S1D791_CYCTE8.580e-2651.58Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009072Histone-foldGENE3D1.10.20.10coord: 2..130
e-value: 4.7E-35
score: 122.4
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 2..110
IPR003958Transcription factor CBF/NF-Y/archaeal histone domainPFAMPF00808CBFD_NFYB_HMFcoord: 2..64
e-value: 2.7E-12
score: 46.8
NoneNo IPR availablePANTHERPTHR46172DNA polymerase epsilon subunit 3coord: 2..134

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5340contigL-elsbetiae_contig5340:10426..12150 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5340.13521.1mRNA_L-elsbetiae_contig5340.13521.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5340 10426..12150 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5340.13521.1 ID=prot_L-elsbetiae_contig5340.13521.1|Name=mRNA_L-elsbetiae_contig5340.13521.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=232bp
PPQACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREA
KRQTISAQDVMQAIKELEFGELEEPLKEYLDQYRREASAKKQSKAAMGAP
GPAAAKKEETGGDMMEEPDADDGEAAEGVVGGDDTAGGREGRIGSTASTA
ATSAAAQQQPAGAQGSVAVAAAAAATTDMSHQHQHPQHPPPQQQQPLQQQ
PPAGPVPMDEDGTAPAPLPAAVAGAGDSVIG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009072Histone-fold
IPR003958CBFA_NFYB_domain