mRNA_L-elsbetiae_contig5340.13521.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5340.13521.1 vs. uniprot
Match: D8LKB4_ECTSI (CBFD_NFYB_HMF domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKB4_ECTSI) HSP 1 Score: 195 bits (496), Expect = 5.490e-59 Identity = 102/103 (99.03%), Postives = 102/103 (99.03%), Query Frame = 1 Query: 1 PPQACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYLDQYRREASAKKQSKAAMGAPGPA 309 PPQACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYLDQYRREASAKKQSKAAMGA GPA Sbjct: 11 PPQACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYLDQYRREASAKKQSKAAMGAAGPA 113
BLAST of mRNA_L-elsbetiae_contig5340.13521.1 vs. uniprot
Match: A0A6V1RK43_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RK43_HETAK) HSP 1 Score: 132 bits (333), Expect = 2.150e-35 Identity = 62/81 (76.54%), Postives = 75/81 (92.59%), Query Frame = 1 Query: 1 PPQACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYLD 243 PPQAC+QR++K+VLPDN+QIGKDAKAAF+R+AGIFIMYLTACANDFCRE+KRQTI+ DVM AI ELEF +L EPLK++L+ Sbjct: 38 PPQACIQRIVKAVLPDNIQIGKDAKAAFARAAGIFIMYLTACANDFCRESKRQTITGPDVMMAISELEFHDLVEPLKDFLE 118
BLAST of mRNA_L-elsbetiae_contig5340.13521.1 vs. uniprot
Match: A0A7S2SN07_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SN07_9STRA) HSP 1 Score: 129 bits (323), Expect = 3.230e-33 Identity = 64/96 (66.67%), Postives = 79/96 (82.29%), Query Frame = 1 Query: 1 PPQACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYLDQYRREASAKKQSKAA 288 PPQACVQR+IKS LPDN QI K++KAAFS++AGIFI+YLT CANDFC+E KR TIS+ DVM A++ELEF +L PL+E+L YR++AS KK AA Sbjct: 73 PPQACVQRIIKSALPDNCQITKESKAAFSKAAGIFIIYLTTCANDFCKENKRSTISSADVMSAMRELEFHDLMGPLEEFLTNYRKDASTKKDGVAA 168
BLAST of mRNA_L-elsbetiae_contig5340.13521.1 vs. uniprot
Match: A0A7S2DWQ9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DWQ9_9STRA) HSP 1 Score: 119 bits (299), Expect = 8.380e-30 Identity = 57/92 (61.96%), Postives = 76/92 (82.61%), Query Frame = 1 Query: 1 PPQACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYLDQYRREASAKKQ 276 PP ACVQR+IK VLPD+ QI K++K AFS++AGIFI+YLT CANDFC+E KR TIS+ DV+ A++ELEF +L PL+E+L YR++ +AKK+ Sbjct: 26 PPMACVQRIIKGVLPDSCQITKESKTAFSKAAGIFIIYLTTCANDFCKEGKRSTISSADVLAALRELEFHDLIGPLEEFLAHYRQDTNAKKE 117
BLAST of mRNA_L-elsbetiae_contig5340.13521.1 vs. uniprot
Match: A0A7S3HH50_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HH50_9STRA) HSP 1 Score: 112 bits (279), Expect = 1.020e-27 Identity = 52/91 (57.14%), Postives = 73/91 (80.22%), Query Frame = 1 Query: 1 PPQACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYLDQYRREASAKK 273 PP ACV RV+K+ LP+N+ + KDA+AAF R+AGIFI YLT C+NDFCRE+KR TI QDVM A++EL F + E+PL+E+L+ Y++++ +K Sbjct: 18 PPMACVSRVMKAALPENILLTKDARAAFVRAAGIFIFYLTHCSNDFCRESKRATIFPQDVMAALRELGFEDFEKPLEEFLEAYKKDSEQRK 108
BLAST of mRNA_L-elsbetiae_contig5340.13521.1 vs. uniprot
Match: A0A7S2WSI8_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WSI8_9STRA) HSP 1 Score: 112 bits (280), Expect = 8.720e-27 Identity = 54/98 (55.10%), Postives = 74/98 (75.51%), Query Frame = 1 Query: 1 PPQACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYLDQYRREASAKKQSKAAMG 294 PP ACV+R++KS LP + +GKDA +AF+R+ GIF++YLTACANDF RE KRQTI+A D+M +IKEL+F E L +L+Q+R+E K++ K A G Sbjct: 35 PPLACVRRLLKSSLPTSTNVGKDASSAFARACGIFVIYLTACANDFARENKRQTITANDIMASIKELDFDEFTPQLTGFLEQHRKEEKEKRERKKASG 132
BLAST of mRNA_L-elsbetiae_contig5340.13521.1 vs. uniprot
Match: A0A1E7FAU9_9STRA (CBFD_NFYB_HMF domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FAU9_9STRA) HSP 1 Score: 106 bits (264), Expect = 4.720e-26 Identity = 54/94 (57.45%), Postives = 68/94 (72.34%), Query Frame = 1 Query: 4 PQACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYLDQYRREASAKKQSKA 285 P ACV+R++K LP + +GKDA AAF+R++GIFI+YLTACANDF RE +RQTI+A DV+ AIKELEF E L +L+ YR KK KA Sbjct: 1 PVACVRRILKKTLPSSSNVGKDAVAAFARASGIFIIYLTACANDFARENRRQTITANDVLAAIKELEFDEFSPELTSFLEGYREAEKNKKDVKA 94
BLAST of mRNA_L-elsbetiae_contig5340.13521.1 vs. uniprot
Match: A0A7S1UNS2_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UNS2_9STRA) HSP 1 Score: 109 bits (272), Expect = 4.860e-26 Identity = 50/96 (52.08%), Postives = 72/96 (75.00%), Query Frame = 1 Query: 1 PPQACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYLDQYRREASAKKQSKAA 288 PP AC++R++K LP + +GKDA AAF+R+ GIF++Y+TACANDF E +RQTI+A DV+ A+KEL+F E LK +L+ YR +K+++KAA Sbjct: 22 PPLACIRRILKHALPSSTNVGKDASAAFARACGIFVIYITACANDFAHENRRQTITANDVLAALKELDFDEFTPQLKTFLENYRAAEKSKREAKAA 117
BLAST of mRNA_L-elsbetiae_contig5340.13521.1 vs. uniprot
Match: A0A6U9ZNZ1_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A6U9ZNZ1_9STRA) HSP 1 Score: 111 bits (277), Expect = 6.200e-26 Identity = 56/96 (58.33%), Postives = 72/96 (75.00%), Query Frame = 1 Query: 1 PPQACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYLDQYRREASAKKQSKAA 288 PP ACV+R++K LP + +GKDA AAF+R++GIFI+YLTACANDF RE +RQTI+A DV+ AIKELEF E L +L++YR KK +KAA Sbjct: 47 PPVACVRRILKQTLPSSSNVGKDAVAAFARASGIFIIYLTACANDFARENRRQTITANDVLAAIKELEFDEFAPELSTFLERYRELEKNKKDAKAA 142
BLAST of mRNA_L-elsbetiae_contig5340.13521.1 vs. uniprot
Match: A0A7S1D791_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D791_CYCTE) HSP 1 Score: 108 bits (271), Expect = 8.580e-26 Identity = 49/95 (51.58%), Postives = 74/95 (77.89%), Query Frame = 1 Query: 1 PPQACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYLDQYRREASAKKQSKA 285 PP ACV+R++K+ LP + +GKDA AAF+R+ GIF++Y+TACANDF RE++RQTI+A DV+ ++KEL+F E L+ +LD++R +K+ +KA Sbjct: 34 PPLACVRRILKNALPSSTNVGKDASAAFARACGIFVIYITACANDFARESRRQTITANDVLASVKELDFDEFSPHLEAFLDRHRAAEKSKRDAKA 128 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5340.13521.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5340.13521.1 >prot_L-elsbetiae_contig5340.13521.1 ID=prot_L-elsbetiae_contig5340.13521.1|Name=mRNA_L-elsbetiae_contig5340.13521.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=232bp PPQACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAback to top mRNA from alignment at L-elsbetiae_contig5340:10426..12150- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5340.13521.1 ID=mRNA_L-elsbetiae_contig5340.13521.1|Name=mRNA_L-elsbetiae_contig5340.13521.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1725bp|location=Sequence derived from alignment at L-elsbetiae_contig5340:10426..12150- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5340:10426..12150- >mRNA_L-elsbetiae_contig5340.13521.1 ID=mRNA_L-elsbetiae_contig5340.13521.1|Name=mRNA_L-elsbetiae_contig5340.13521.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1392bp|location=Sequence derived from alignment at L-elsbetiae_contig5340:10426..12150- (Laminarionema elsbetiae ELsaHSoW15)back to top |