prot_L-elsbetiae_contig5336.13506.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5336.13506.1
Unique Nameprot_L-elsbetiae_contig5336.13506.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length89
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig5336.13506.1 vs. uniprot
Match: A0A6H5J981_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J981_9PHAE)

HSP 1 Score: 124 bits (312), Expect = 2.980e-31
Identity = 55/78 (70.51%), Postives = 61/78 (78.21%), Query Frame = 0 
Query:    1 YRCDGCDDFPLQHVRHHCKVCADFDLCPQCYEVFHGPNSQFQGGNAVMLRDHSTSHEMVTLQVNAVRPASQRDASAAP 78
            YRCDGCDD PLQHVRHHC VCADFDLCP+C++ +HGPNSQFQG NAVML  HSTSH MV L VN+  PA     + AP
Sbjct: 4153 YRCDGCDDCPLQHVRHHCLVCADFDLCPRCHDRYHGPNSQFQGENAVMLGSHSTSHGMVALPVNSAHPAGASVPTGAP 4230
[Close]
BLAST of mRNA_L-elsbetiae_contig5336.13506.1 vs. uniprot
Match: D8LLX0_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLX0_ECTSI)

HSP 1 Score: 120 bits (301), Expect = 9.090e-30
Identity = 56/88 (63.64%), Postives = 65/88 (73.86%), Query Frame = 0 
Query:    1 YRCDGCDDFPLQHVRHHCKVCADFDLCPQCYEVFHGPNSQFQGGNAVMLRDHSTSHEMVTLQVNAVRPASQRDASAAPGLLPPASPRN 88
            YRCD CDD PLQHVR+HC VCADFDLC +CY+ +HGPNSQFQG NAVML  HSTSH MV L VN+ +PA     ++ P   P + PRN
Sbjct: 3969 YRCDSCDDCPLQHVRYHCLVCADFDLCARCYDRYHGPNSQFQGENAVMLGSHSTSHSMVALPVNSAQPAG----ASVPTGAPQSPPRN 4052
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5336.13506.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J981_9PHAE2.980e-3170.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLX0_ECTSI9.090e-3063.64Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000433Zinc finger, ZZ-typeSMARTSM00291zz_5coord: 1..40
e-value: 0.0045
score: 24.8
IPR000433Zinc finger, ZZ-typePFAMPF00569ZZcoord: 1..34
e-value: 2.0E-8
score: 33.9
IPR000433Zinc finger, ZZ-typePROSITEPS50135ZF_ZZ_2coord: 1..31
score: 11.094
NoneNo IPR availableGENE3D3.30.60.90coord: 1..65
e-value: 4.6E-9
score: 38.0
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 1..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5336contigL-elsbetiae_contig5336:10171..10758 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5336.13506.1mRNA_L-elsbetiae_contig5336.13506.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5336 10171..10758 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5336.13506.1 ID=prot_L-elsbetiae_contig5336.13506.1|Name=mRNA_L-elsbetiae_contig5336.13506.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=89bp
YRCDGCDDFPLQHVRHHCKVCADFDLCPQCYEVFHGPNSQFQGGNAVMLR
DHSTSHEMVTLQVNAVRPASQRDASAAPGLLPPASPRNP
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000433Znf_ZZ