prot_L-elsbetiae_contig5328.13493.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5328.13493.1
Unique Nameprot_L-elsbetiae_contig5328.13493.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length82
Homology
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BLAST of mRNA_L-elsbetiae_contig5328.13493.1 vs. uniprot
Match: D8LJE2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJE2_ECTSI)

HSP 1 Score: 57.0 bits (136), Expect = 1.380e-7
Identity = 30/47 (63.83%), Postives = 35/47 (74.47%), Query Frame = 0 
Query:   14 GHQAQVKCLSIDSRGELLVSGDESGSICARLLHPRQSHSSSPRGWGT 60
            G + +V CLSID RGELLV+GDESG+ICARLLH    HS +  G GT
Sbjct:   12 GRRQKVGCLSIDRRGELLVTGDESGAICARLLH----HSGNRSGDGT 54
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BLAST of mRNA_L-elsbetiae_contig5328.13493.1 vs. uniprot
Match: A0A6H5L2I0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2I0_9PHAE)

HSP 1 Score: 53.9 bits (128), Expect = 1.680e-6
Identity = 29/42 (69.05%), Postives = 32/42 (76.19%), Query Frame = 0 
Query:   19 VKCLSIDSRGELLVSGDESGSICARLLHPRQSHSSSPRGWGT 60
            V CLSID RGELLV+GDESG+ICARLLH    HS +  G GT
Sbjct:    5 VGCLSIDRRGELLVTGDESGAICARLLH----HSGNRSGDGT 42
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5328.13493.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LJE2_ECTSI1.380e-763.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L2I0_9PHAE1.680e-669.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5328contigL-elsbetiae_contig5328:857..1699 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5328.13493.1mRNA_L-elsbetiae_contig5328.13493.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5328 857..1699 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5328.13493.1 ID=prot_L-elsbetiae_contig5328.13493.1|Name=mRNA_L-elsbetiae_contig5328.13493.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=82bp
LGLVDGSRVVALDGHQAQVKCLSIDSRGELLVSGDESGSICARLLHPRQS
HSSSPRGWGTGDTGHRGQELGAAATVDGGLGA
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