prot_L-elsbetiae_contig5326.13489.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5326.13489.1
Unique Nameprot_L-elsbetiae_contig5326.13489.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length120
Homology
BLAST of mRNA_L-elsbetiae_contig5326.13489.1 vs. uniprot
Match: D8LR00_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR00_ECTSI)

HSP 1 Score: 164 bits (414), Expect = 9.320e-46
Identity = 104/120 (86.67%), Postives = 111/120 (92.50%), Query Frame = 0
Query:    1 LLAGAGASGAAAVTDVEMEARKIKAGILEIERKRGLVIAERQEKEMQRVVENEQRMAELHKKINRVEEADAKRRAEHDLKVAQQRAAAADKRAKKEIEKHEREKQEDEQRKEMIKRTAEA 120
            LLAGA A+ A   TDVE+EAR+IKAGILEIERKRGLVIAERQEKEMQRVVENEQRMA+LHKKI RVEEADAKRRAEHD +VAQQRAAAA+KRAKKE+EKHEREK EDEQRKEMIKR AEA
Sbjct:  104 LLAGATAASA---TDVELEARRIKAGILEIERKRGLVIAERQEKEMQRVVENEQRMADLHKKILRVEEADAKRRAEHDQRVAQQRAAAAEKRAKKEMEKHEREKMEDEQRKEMIKRAAEA 220          
BLAST of mRNA_L-elsbetiae_contig5326.13489.1 vs. uniprot
Match: A0A6H5J6Z0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6Z0_9PHAE)

HSP 1 Score: 107 bits (268), Expect = 1.990e-26
Identity = 66/75 (88.00%), Postives = 71/75 (94.67%), Query Frame = 0
Query:   46 MQRVVENEQRMAELHKKINRVEEADAKRRAEHDLKVAQQRAAAADKRAKKEIEKHEREKQEDEQRKEMIKRTAEA 120
            MQR+VENEQRMA+LHKKI RVEEADAKRRAEHD +VAQQRAAAA+KRAKKE+EKHEREK EDEQRKEMIKR AEA
Sbjct:    1 MQRLVENEQRMADLHKKILRVEEADAKRRAEHDQRVAQQRAAAAEKRAKKEMEKHEREKVEDEQRKEMIKRAAEA 75          
BLAST of mRNA_L-elsbetiae_contig5326.13489.1 vs. uniprot
Match: A0A835Z042_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z042_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 8.780e-11
Identity = 42/83 (50.60%), Postives = 59/83 (71.08%), Query Frame = 0
Query:   15 DVEMEARKIKAGILEIERKRGLVIAERQEKEMQRVVENEQRMAELHKKINRVEEADAKRRAEHDLKVAQQRAAAADKRAKKEI 97
            D+  EA K++AGILE+ERKR   + +RQEKE+ R ++ E R AEL  KI   ++ DA+RR +H+  VA QR AAADKR ++E+
Sbjct:  127 DMAAEAEKVRAGILELERKRTQSVKKRQEKEVARALDAEARFAELQAKILHSQDEDARRRRDHEDAVAAQRGAAADKRRQREL 209          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5326.13489.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LR00_ECTSI9.320e-4686.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J6Z0_9PHAE1.990e-2688.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z042_9STRA8.780e-1150.60Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 72..117
NoneNo IPR availableCOILSCoilCoilcoord: 36..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5326contigL-elsbetiae_contig5326:4936..7335 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5326.13489.1mRNA_L-elsbetiae_contig5326.13489.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5326 4936..7335 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5326.13489.1 ID=prot_L-elsbetiae_contig5326.13489.1|Name=mRNA_L-elsbetiae_contig5326.13489.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=120bp
LLAGAGASGAAAVTDVEMEARKIKAGILEIERKRGLVIAERQEKEMQRVV
ENEQRMAELHKKINRVEEADAKRRAEHDLKVAQQRAAAADKRAKKEIEKH
EREKQEDEQRKEMIKRTAEA
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