prot_L-elsbetiae_contig5300.13460.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5300.13460.1
Unique Nameprot_L-elsbetiae_contig5300.13460.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length774
Homology
BLAST of mRNA_L-elsbetiae_contig5300.13460.1 vs. uniprot
Match: A0A6H5JBS2_9PHAE (SAM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JBS2_9PHAE)

HSP 1 Score: 704 bits (1817), Expect = 6.040e-242
Identity = 499/830 (60.12%), Postives = 547/830 (65.90%), Query Frame = 0
Query:    1 MPRQVTRALDKLKQPVRKAVLSGGLDRDILEDDSLITGLSDLQTKQAIKVLDTYCANVQRQGSGRIQNKAAYLMSLIQSYKLGPASGTT-GSAQRLMERLSPAVSQAVQAVFDPVVDRVVLEDRALMELLAKVPEEQALAALKKYRATVQRRGRDAIENRCGYLIGFLKQYQDGVAVVGVPGNAVHQSRNASALSSNGECQPQANGSTSXXXXXXXXXXXX-ANGARNG---GVCGGDSSAQGAAARNGGPGGS-------NASGVRPISYLQAPVRKELEKLFESGRDKTVLEDVGLIKQLSRLGEEQALAALRNYKEASKHRRDIHNKSAYLMGILRGYIEGTTPISKAPWEAGGNDEGSSGRASTSPAPPSASXXXXXXXXXXXXXXXXXXXXXSDVERSGASSMQKPNSPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATPPDGVAPFVGMEPSLANSGPRTLVGFTSAPLHSEQP--------------------PPPPTASL-----ASPLLRGDGRFLGGIGHNGVGGDSAPHQHDPSNSLSYLDGSGAHQQ------------PLRHISQHESLFGG-HLSTNP-GGQQQTLVGPGLLGGDFLSSGGGGAPAPTATHAGGPGSISNPGLFGSGLLAGVDFGSCSTA--SLGNTVPASPGSGSGLGSMSGLGSSFLSGAGSGVESPNSSDAGNDAPGTLTSAATAALXXXXXXXXXXXXXXX---TDWPSSSSPGSGEGREN-DSSNGNGVVNGVVDMLERLNLSKYVPVLAEAEVDLDALRLFGENDLKDLGFPKGPRIKLLHEVQTLNFPARA 773
            MPRQ TR +DKL+ PVRKA L+G LDR  L+DD L+TGLS+LQTKQA+KVLDTYCANVQRQGSGRIQNKAAYLMSLIQSYKLGPA G T GSAQRL+ERLSP VSQAVQ VFDPV+DR V EDRALMELLAKVPEEQALAALKKYRATVQRRGRDAIENRCGYLIGFLKQYQDGVA+VGVPGNAVHQ+RNA   SSNG  Q   NGS               ANGARNG   G  GG S+   ++++  G           N+SGVRPI+YLQAPVRKELEKLFESG+DKTVLEDVGLIKQLSRLGEEQALAAL+NYKEASKHRRDIHNKSAYLMGILRGYIEGTTPISKAPWE GGN++G    A T  APP  +   XXXXXXXXXXXXXXXXXX                                 XXXXXXXXXXXXXXXXX X   P               ++ PR L GF +AP  ++                      P  P  S+     ASP L GDGRFL  + H+G  G  +  Q++PSN L Y++GSG HQ             PLRH+S HESLFGG HLS N  GGQ QTLVGPGLLGGDFL+SGGG                              +FGSCS +  +LGN +P SPGSGSGL               SGVESP SSDAGND PGTL S+ T                     TDW SS SP S +GREN DSSNGN VV    D+L RLNLSKYV VLAEAEVDLDALRLFGE+DLKDLGFPKGPR+KLLHEVQ LNFP+RA
Sbjct:   29 MPRQATRPVDKLRGPVRKAALAG-LDRTSLQDDPLLTGLSELQTKQALKVLDTYCANVQRQGSGRIQNKAAYLMSLIQSYKLGPAPGATAGSAQRLLERLSPPVSQAVQGVFDPVLDRCVYEDRALMELLAKVPEEQALAALKKYRATVQRRGRDAIENRCGYLIGFLKQYQDGVAIVGVPGNAVHQARNALESSSNGYGQHLTNGSAGQSSSSATNGHNPNANGARNGAMNGAGGGPSATATSSSQGTGAXXXXXXXXXXNSSGVRPITYLQAPVRKELEKLFESGKDKTVLEDVGLIKQLSRLGEEQALAALKNYKEASKHRRDIHNKSAYLMGILRGYIEGTTPISKAPWEGGGNEDGPGVNAPT--APPGTNRARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------XXXXXXXXXXXXXXXXXSXXXXPATXXXXXXXXXXVAVSAPPRELGGFANAPAQTQXXXXXXXXXXXXXXXXXXXVVRPAAPLTSISATRSASPPLGGDGRFLASLRHDGASGRPSQGQYEPSNGLLYMNGSGTHQXXXXXXXXXXXXXPLRHVSPHESLFGGGHLSANHNGGQPQTLVGPGLLGGDFLASGGGANWTGXXXXXXXXXXXXXXXXXXXXXXXXENFGSCSNSRSNLGNAIPQSPGSGSGLXXXXXXXXXXXXVPDSGVESPLSSDAGNDTPGTLPSSTTTTATVSAGSLSVAGSSSCNGSTDWASSGSPESVQGRENTDSSNGNSVV----DVLARLNLSKYVAVLAEAEVDLDALRLFGEDDLKDLGFPKGPRVKLLHEVQNLNFPSRA 831          
BLAST of mRNA_L-elsbetiae_contig5300.13460.1 vs. uniprot
Match: A0A813JZV9_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813JZV9_POLGL)

HSP 1 Score: 65.1 bits (157), Expect = 5.640e-9
Identity = 29/56 (51.79%), Postives = 41/56 (73.21%), Query Frame = 0
Query:  716 MLERLNLSKYVPVLAEAEVDLDALRLFGENDLKDLGFPKGPRIKLLHEVQTLNFPA 771
            +++++ L +++P     EVDLDAL LF E DL+DLG PKGPR+KLL  VQ + FP+
Sbjct:    4 LMQQIGLERFIPAFQAEEVDLDALSLFEEKDLQDLGLPKGPRVKLLRAVQGI-FPS 58          
BLAST of mRNA_L-elsbetiae_contig5300.13460.1 vs. uniprot
Match: A0A813KCP2_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813KCP2_POLGL)

HSP 1 Score: 62.4 bits (150), Expect = 1.080e-6
Identity = 29/52 (55.77%), Postives = 37/52 (71.15%), Query Frame = 0
Query:  720 LNLSKYVPVLAEAEVDLDALRLFGENDLKDLGFPKGPRIKLLHEVQTLNFPA 771
            + L +++P     EVDLDAL LF E DL+DLG PKGPR+KLL  VQ + FP+
Sbjct:    1 IGLERFIPAFQAEEVDLDALSLFEEKDLQDLGLPKGPRVKLLRAVQGI-FPS 51          
BLAST of mRNA_L-elsbetiae_contig5300.13460.1 vs. uniprot
Match: UPI0018A2217A (phospholipase DDHD2 isoform X5 n=2 Tax=Chelonioidea TaxID=27791 RepID=UPI0018A2217A)

HSP 1 Score: 59.7 bits (143), Expect = 1.660e-5
Identity = 29/59 (49.15%), Postives = 40/59 (67.80%), Query Frame = 0
Query:  708 GVVNGVVDMLERLNLSKYVPVLAEAEVDLDALRLFGENDLKDLGFPKGPRIKLLHEVQT 766
            G V GV ++L++L LS+Y  V  +  +D  AL L  E DLKD+G P GPR+K+LH V+T
Sbjct:  381 GDVGGVKEILKKLELSEYCSVFEKERLDTQALALCTEKDLKDMGIPLGPRMKILHYVRT 439          
BLAST of mRNA_L-elsbetiae_contig5300.13460.1 vs. uniprot
Match: UPI0018E8C551 (phospholipase DDHD2 isoform X3 n=2 Tax=Dermochelys coriacea TaxID=27794 RepID=UPI0018E8C551)

HSP 1 Score: 59.7 bits (143), Expect = 1.920e-5
Identity = 28/59 (47.46%), Postives = 40/59 (67.80%), Query Frame = 0
Query:  708 GVVNGVVDMLERLNLSKYVPVLAEAEVDLDALRLFGENDLKDLGFPKGPRIKLLHEVQT 766
            G V GV + L++L LS+Y  V  +  +D+ AL L  E DLKD+G P GPR+K+LH ++T
Sbjct:  351 GDVGGVKETLKKLELSEYCSVFEKERLDMQALALCTEKDLKDMGIPLGPRMKILHYIRT 409          
BLAST of mRNA_L-elsbetiae_contig5300.13460.1 vs. uniprot
Match: A0A8D0HGH4_SPHPU (SAM domain-containing protein n=1 Tax=Sphenodon punctatus TaxID=8508 RepID=A0A8D0HGH4_SPHPU)

HSP 1 Score: 53.5 bits (127), Expect = 2.610e-5
Identity = 23/57 (40.35%), Postives = 39/57 (68.42%), Query Frame = 0
Query:  710 VNGVVDMLERLNLSKYVPVLAEAEVDLDALRLFGENDLKDLGFPKGPRIKLLHEVQT 766
            ++ V D+L++L LS+Y  V  + +VD  AL L  + +LK++G P GPR+K+LH ++ 
Sbjct:   24 ISDVKDILKKLELSEYYSVFEKEQVDRQALALCTDKELKEMGIPLGPRVKILHYIRN 80          
BLAST of mRNA_L-elsbetiae_contig5300.13460.1 vs. uniprot
Match: D7FXX2_ECTSI (SAM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXX2_ECTSI)

HSP 1 Score: 55.1 bits (131), Expect = 3.240e-5
Identity = 25/54 (46.30%), Postives = 36/54 (66.67%), Query Frame = 0
Query:  712 GVVD-MLERLNLSKYVPVLAEAEVDLDALRLFGENDLKDLGFPKGPRIKLLHEV 764
            G +D +L+ + L KYV V  EAEVDL  L +  E D ++LG  KGPR+K++H +
Sbjct:   95 GTIDELLDEIGLMKYVDVFREAEVDLATLCIMSEQDFRELGILKGPRVKIMHHI 148          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5300.13460.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5JBS2_9PHAE6.040e-24260.12SAM domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A813JZV9_POLGL5.640e-951.79Hypothetical protein (Fragment) n=1 Tax=Polarella ... [more]
A0A813KCP2_POLGL1.080e-655.77Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
UPI0018A2217A1.660e-549.15phospholipase DDHD2 isoform X5 n=2 Tax=Chelonioide... [more]
UPI0018E8C5511.920e-547.46phospholipase DDHD2 isoform X3 n=2 Tax=Dermochelys... [more]
A0A8D0HGH4_SPHPU2.610e-540.35SAM domain-containing protein n=1 Tax=Sphenodon pu... [more]
D7FXX2_ECTSI3.240e-546.30SAM domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 414..437
NoneNo IPR availablePANTHERPTHR23202:SF27VERPROLIN 1, ISOFORM Gcoord: 186..671
NoneNo IPR availablePANTHERPTHR23202WASP INTERACTING PROTEIN-RELATEDcoord: 186..671
IPR001660Sterile alpha motif domainSMARTSM00454SAM_4coord: 705..770
e-value: 0.0042
score: 26.3
IPR001660Sterile alpha motif domainPFAMPF00536SAM_1coord: 711..767
e-value: 3.3E-6
score: 27.4
IPR041337Heterogeneous nuclear ribonucleoprotein Q acidic domainPFAMPF18360hnRNP_Q_AcDcoord: 260..329
e-value: 8.1E-10
score: 38.5
IPR013761Sterile alpha motif/pointed domain superfamilyGENE3D1.10.150.50coord: 711..770
e-value: 9.9E-14
score: 52.9
IPR013761Sterile alpha motif/pointed domain superfamilySUPERFAMILY47769SAM/Pointed domaincoord: 708..768

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5300contigL-elsbetiae_contig5300:1266..6575 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5300.13460.1mRNA_L-elsbetiae_contig5300.13460.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5300 409..6862 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5300.13460.1 ID=prot_L-elsbetiae_contig5300.13460.1|Name=mRNA_L-elsbetiae_contig5300.13460.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=774bp
MPRQVTRALDKLKQPVRKAVLSGGLDRDILEDDSLITGLSDLQTKQAIKV
LDTYCANVQRQGSGRIQNKAAYLMSLIQSYKLGPASGTTGSAQRLMERLS
PAVSQAVQAVFDPVVDRVVLEDRALMELLAKVPEEQALAALKKYRATVQR
RGRDAIENRCGYLIGFLKQYQDGVAVVGVPGNAVHQSRNASALSSNGECQ
PQANGSTSQSSSAGHGHNPNANGARNGGVCGGDSSAQGAAARNGGPGGSN
ASGVRPISYLQAPVRKELEKLFESGRDKTVLEDVGLIKQLSRLGEEQALA
ALRNYKEASKHRRDIHNKSAYLMGILRGYIEGTTPISKAPWEAGGNDEGS
SGRASTSPAPPSASTSASVPASASAGGRVRGRVRGSDVERSGASSMQKPN
SPTPMPTPPPPQPEQQQQQQQQQQQQQQQQQQQQQQQAATPPDGVAPFVG
MEPSLANSGPRTLVGFTSAPLHSEQPPPPPTASLASPLLRGDGRFLGGIG
HNGVGGDSAPHQHDPSNSLSYLDGSGAHQQPLRHISQHESLFGGHLSTNP
GGQQQTLVGPGLLGGDFLSSGGGGAPAPTATHAGGPGSISNPGLFGSGLL
AGVDFGSCSTASLGNTVPASPGSGSGLGSMSGLGSSFLSGAGSGVESPNS
SDAGNDAPGTLTSAATAALAGSLSIAGSSSCNGSTDWPSSSSPGSGEGRE
NDSSNGNGVVNGVVDMLERLNLSKYVPVLAEAEVDLDALRLFGENDLKDL
GFPKGPRIKLLHEVQTLNFPARA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001660SAM
IPR041337hnRNP_Q_AcD
IPR013761SAM/pointed_sf