mRNA_L-elsbetiae_contig5246.13365.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5246.13365.1
Unique NamemRNA_L-elsbetiae_contig5246.13365.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig5246.13365.1 vs. uniprot
Match: A0A6H5K785_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K785_9PHAE)

HSP 1 Score: 465 bits (1196), Expect = 2.910e-162
Identity = 248/315 (78.73%), Postives = 253/315 (80.32%), Query Frame = 1
Query:    1 MPIGEDPRHGLLVALVVALVGVLLLIFAALAVAPVLVIVLGLMTYVIWWYVSREDTSYMHHAQEHENRFWTTVAFCFSGALVFVHDSPVALGQWSPVLGFLFVMMFTFAVHSYDRQ-----------------------------------------------------------LHRSRIGRAPNFRSSVESSTMLHSNVQDKCRRISVCLSKLDNRLVATNLNHMLWADMVQNLEKEIVNILSDADPSELNYMLPKIGLGLLFYKVKDHAPINLHRTRLLNVLADTRISDLNVTSRALVLDALQQLKLSAHKD 768
            MP+GEDPRHGLLVALVV LVGVLLLIFAALAVAPVLVIVLGLMTYV+WWYVSREDTSYMHHAQEHENRFWTTVAFCFSGALVFVHDSPVALGQWSPVLGFLFVMMFTF+VHSYDRQ                                                           LHRSRIGRAPNFR SVESSTMLHS+VQDKCRRIS+CLSKLDNRLVATNLNHMLWADMVQNLEKEIVNILSDADPSELNYMLPKIGLGLLFYKVKDHAPINLHRTRLLNVLAD RISDLNVTSRALVLDALQQLKLSAHKD
Sbjct:    1 MPMGEDPRHGLLVALVVGLVGVLLLIFAALAVAPVLVIVLGLMTYVVWWYVSREDTSYMHHAQEHENRFWTTVAFCFSGALVFVHDSPVALGQWSPVLGFLFVMMFTFSVHSYDRQHDEIRSLELGVGRSLASVSDSGAWVPADYPSVRASRPLGGPCPSSAHTRRPRRARSGSQLHRSRIGRAPNFRPSVESSTMLHSSVQDKCRRISLCLSKLDNRLVATNLNHMLWADMVQNLEKEIVNILSDADPSELNYMLPKIGLGLLFYKVKDHAPINLHRTRLLNVLADNRISDLNVTSRALVLDALQQLKLSAHKD 315          
BLAST of mRNA_L-elsbetiae_contig5246.13365.1 vs. uniprot
Match: D7G3Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Z8_ECTSI)

HSP 1 Score: 492 bits (1266), Expect = 1.830e-158
Identity = 248/256 (96.88%), Postives = 253/256 (98.83%), Query Frame = 1
Query:    1 MPIGEDPRHGLLVALVVALVGVLLLIFAALAVAPVLVIVLGLMTYVIWWYVSREDTSYMHHAQEHENRFWTTVAFCFSGALVFVHDSPVALGQWSPVLGFLFVMMFTFAVHSYDRQLHRSRIGRAPNFRSSVESSTMLHSNVQDKCRRISVCLSKLDNRLVATNLNHMLWADMVQNLEKEIVNILSDADPSELNYMLPKIGLGLLFYKVKDHAPINLHRTRLLNVLADTRISDLNVTSRALVLDALQQLKLSAHKD 768
            MP+GEDPRHGLLVALVV LVGVLLLIFAALAVAPVLVIVLGLMTYV+WWYVSREDTSYMHHAQEHENRFWTTVAFCFSGALVFVHDSPVALGQWSPVLGFLFVMMFTF+VHSYDRQLHRSRIGRAPNFR SVESSTMLHS+VQDKCRRIS+CLSKLDNRLVATNLNHMLWADMVQNLEKEIVNILSDADPSELNYMLPKIGLGLLFYKVKDHAPINLHRTRLLNVLAD RISDLNVTSRALVLDALQQLKLSAHKD
Sbjct:    1 MPMGEDPRHGLLVALVVGLVGVLLLIFAALAVAPVLVIVLGLMTYVVWWYVSREDTSYMHHAQEHENRFWTTVAFCFSGALVFVHDSPVALGQWSPVLGFLFVMMFTFSVHSYDRQLHRSRIGRAPNFRPSVESSTMLHSSVQDKCRRISLCLSKLDNRLVATNLNHMLWADMVQNLEKEIVNILSDADPSELNYMLPKIGLGLLFYKVKDHAPINLHRTRLLNVLADNRISDLNVTSRALVLDALQQLKLSAHKD 256          
BLAST of mRNA_L-elsbetiae_contig5246.13365.1 vs. uniprot
Match: A0A2P4YCM6_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YCM6_9STRA)

HSP 1 Score: 180 bits (456), Expect = 7.370e-51
Identity = 109/258 (42.25%), Postives = 157/258 (60.85%), Query Frame = 1
Query:   16 DPRHGLLVALVVALVGVL--LLIFAALAVAPVLVIV-LGLMTYVIWWYVSREDTSYMHHAQEHENRFWTTVAFCFSGALVFVHDSPVALGQWSPVLGFLFVMMFTFAVHSYDRQLHRSRIGRAPNFRSSVESST----MLHSNVQDKCRRISVCLSKLDNRLVATNLNHMLWADMVQNLEKEIVNILSDADPSELNYMLPKIGLGLLFYKVKDHAPI--NLHRTRLLNVLADTRISDLNVTSRALVLDALQQLKLSAH 762
            +P +  LV + +   GVL  LL+ A  A AP+L    LG+M YVI  Y+S E     H AQE ENRFWT  AF FS A++++ DSP+A+GQW+  LG + V  FT +VH +DR LHR  I R P  + +    +       +  ++K   +  C+S++D   + + +N+ML    V+  E +I  IL+ A   ELNY+L  I L LLFYKVKDH+ +  +  RT +L++L  TR++DL+V SRAL+LDAL  +K+SAH
Sbjct:   51 EPANSALVLVGMIFFGVLVALLVMAFFAYAPLLCASWLGIM-YVIGLYLSTESNWRWHDAQEFENRFWTGTAFMFSAAVLYIKDSPLAVGQWNSTLGLVLVFGFTMSVHFFDRFLHRQEISRRPRLKEATRQFSHKLFKYKATAEEKTNLVMECVSRIDRHYLPSTINNMLNLAEVKRRELKIFRILAGAGKDELNYILNHIRLALLFYKVKDHSKVREDQSRTLILDLLCTTRLADLSVMSRALLLDALMVMKISAH 307          
BLAST of mRNA_L-elsbetiae_contig5246.13365.1 vs. uniprot
Match: A0A7S0FB27_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizosolenia setigera TaxID=3005 RepID=A0A7S0FB27_9STRA)

HSP 1 Score: 181 bits (459), Expect = 2.720e-49
Identity = 104/254 (40.94%), Postives = 150/254 (59.06%), Query Frame = 1
Query:   22 RHGLLVALVVALVGVLLLIFAALAVAPVLVIVLGLMTYVIWWYVSREDTSYMHHAQEHENRFWTTVAFCFSGALVFVHDSPVALGQWSPVLGFLFVMMFTFAVHSYDRQLHRSRIGRAPNFRSSVESSTMLHS------NVQDKCRRISVCLSKLDNRLVATNLNHMLWADMVQNLEKEIVNILSDADPSELNYMLPKIGLGLLFYKVKDHAPIN-LHRTRLLNVLADTRISDLNVTSRALVLDALQQLKLSAH 762
            R   ++ L+  LVG+LLL  A  + APV       + Y ++ +V+ E+++ +HHAQE ENRFWT +A  FS AL F  DSP A+G WSP +GF  V+   + VH+YDR LHR  + R    R    ++T L+        V+++   I  CLS +D  L+ + +N+++    +   E+EI+ I  D +P  LNY++  + LGLLFYKVKDH   +  HR+ L+  L  TRIS LNV S+  VL ALQ LKL A+
Sbjct:   22 RVAAMLLLLTLLVGILLLFLAFFSFAPVFCSCTLSLLYTLYLFVAYEESN-IHHAQEFENRFWTILALLFSTALFFAKDSPFAIGNWSPSIGFTLVISIGYGVHAYDRYLHRQELIREHGLRRGSSAATSLNRLKALGIPVEEQLDTIHSCLSDIDQLLIPSTINNIINLRFILKKEREIIQIFEDVEPKALNYLVQHVRLGLLFYKVKDHRNFSGKHRSELIECLCVTRISALNVLSKVFVLHALQMLKLPAN 274          
BLAST of mRNA_L-elsbetiae_contig5246.13365.1 vs. uniprot
Match: A0A662X9P1_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X9P1_9STRA)

HSP 1 Score: 181 bits (458), Expect = 3.360e-48
Identity = 109/260 (41.92%), Postives = 158/260 (60.77%), Query Frame = 1
Query:   16 DPRHGLLVALVVALVGVLL--LIFAALAVAPVLVIV-LGLMTYVIWWYVSREDTSYMHHAQEHENRFWTTVAFCFSGALVFVHDSPVALGQWSPVLGFLFVMMFTFAVHSYDRQLHRSRIGRAPNFRSSVESSTMLHS------NVQDKCRRISVCLSKLDNRLVATNLNHMLWADMVQNLEKEIVNILSDADPSELNYMLPKIGLGLLFYKVKDHAPI--NLHRTRLLNVLADTRISDLNVTSRALVLDALQQLKLSAH 762
            +P    LV + +   GVLL  ++ A  A AP+L    LG+M YVI  Y+S E     H AQE ENRFWT  AF FS A++++ DSP+A+GQW+  LG + V  FT +VH +DR LHR  I R P   +   +    H+        ++K + +  C+S++D   + + +N+M+    V+  E +I  IL+ A   ELN++L  I L LLFYKVKDH+ +  +  RT +L++L  TR++DL+VTSRAL+LDAL  +KLSAH
Sbjct:   52 EPMSNALVLVGMLFFGVLLALVVMAFFAYAPLLCASWLGIM-YVIGLYLSTESNWRWHDAQEFENRFWTGTAFLFSAAVLYIKDSPLAVGQWNSTLGLVLVFSFTMSVHYFDRFLHRQEISRRPRLNTEETARQFSHNLFQYKATAEEKTKLVMQCVSRIDRHYLPSTINNMINLAEVKRRELKIFRILAGAAKDELNFILNHIRLALLFYKVKDHSKVREDQSRTLILDLLCTTRLADLSVTSRALLLDALMVMKLSAH 310          
BLAST of mRNA_L-elsbetiae_contig5246.13365.1 vs. uniprot
Match: A0A225WYB2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WYB2_9STRA)

HSP 1 Score: 178 bits (452), Expect = 2.130e-47
Identity = 108/259 (41.70%), Postives = 158/259 (61.00%), Query Frame = 1
Query:   13 EDPRHGLLVALVVALVGVLL--LIFAALAVAPVLVIV-LGLMTYVIWWYVSREDTSYMHHAQEHENRFWTTVAFCFSGALVFVHDSPVALGQWSPVLGFLFVMMFTFAVHSYDRQLHRSRIGRAPNFRSSVESST----MLHSNVQDKCRRISVCLSKLDNRLVATNLNHMLWADMVQNLEKEIVNILSDADPSELNYMLPKIGLGLLFYKVKDHAPI--NLHRTRLLNVLADTRISDLNVTSRALVLDALQQLKLSAH 762
            ++P +  LV + +   GVLL  +I A  A AP+L    LG+M YVI  Y+S E     H AQE ENRFWT  AF FS A++++ DSP+A+GQW+  LG + V  FT +VH +DR LHR  I R P  + +    +       +  ++K + +  C++++D   + + +N+ML    V+  E +I  IL+ A   ELNY+L  I L LLFYKVKDH+ +  +  RT +L++L  TR+ DL+V SRAL+LDAL  +K+SAH
Sbjct:   44 KEPANSALVLVGMIFFGVLLALVIMAFFAYAPLLCASWLGIM-YVIGLYLSTESNWRWHDAQEFENRFWTGTAFMFSAAVLYIKDSPLAVGQWNSTLGLVLVFGFTMSVHFFDRFLHRQEISRRPRLKEAARQFSHNLFKYKATAEEKTKLVMECVNRIDRHYLPSTINNMLNLAEVKRRELKIFRILAGAAKDELNYILNHIRLALLFYKVKDHSKVREDQSRTLILDLLCTTRLPDLSVMSRALLLDALMVMKISAH 301          
BLAST of mRNA_L-elsbetiae_contig5246.13365.1 vs. uniprot
Match: A0A8K1FIM4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FIM4_PYTOL)

HSP 1 Score: 178 bits (451), Expect = 2.900e-47
Identity = 94/235 (40.00%), Postives = 145/235 (61.70%), Query Frame = 1
Query:   70 LLIFAALAVAPVLVIVLGLMTYVIWWYVSREDTSYMHHAQEHENRFWTTVAFCFSGALVFVHDSPVALGQWSPVLGFLFVMMFTFAVHSYDRQLHRSRIGRAPNFRSSVESSTMLH--SNVQDKCRRISVCLSKLDNRLVATNLNHMLWADMVQNLEKEIVNILSDADPSELNYMLPKIGLGLLFYKVKDHAPI--NLHRTRLLNVLADTRISDLNVTSRALVLDALQQLKLSAH 762
            LLI A  A+AP L      + Y++  Y++ E   + H AQE ENRFWT  AF FS A++++HDSP+A+G+W+  +G   V+ FT  VH  DR +HR  I R P     ++   +       ++K   ++ C++++D   + + +N+M+    V+  E+EI  +LSDA   ELNY++  I L LLFYKVKDH+ +  +  RT +L++L   R++DL VTSRA++LDAL  +K+SAH
Sbjct:   74 LLIMAFFAMAPFLCGSWLALMYMVGLYLTTESDWWWHDAQEFENRFWTMTAFLFSTAVLYIHDSPLAIGRWNSSIGMFLVVSFTSGVHFLDRFIHRQEISRKPRLNPGIQQPELFKHKETAEEKANIVTECVARIDRMYLPSTINNMINLGQVKLQEQEIFRVLSDASKDELNYIINNIRLALLFYKVKDHSKLRSDQSRTLILDLLCSGRLADLTVTSRAILLDALMVMKISAH 308          
BLAST of mRNA_L-elsbetiae_contig5246.13365.1 vs. uniprot
Match: A0A2D4C4B6_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C4B6_PYTIN)

HSP 1 Score: 177 bits (449), Expect = 5.310e-47
Identity = 105/252 (41.67%), Postives = 157/252 (62.30%), Query Frame = 1
Query:   34 LVALVVALVGVLLLIFAALAVAPVLVIV-LGLMTYVIWWYVSREDTSYMHHAQEHENRFWTTVAFCFSGALVFVHDSPVALGQWSPVLGFLFVMMFTFAVHSYDRQLHRSRIGRAPNFRSSVESSTMLH-----SNVQDKCRRISVCLSKLDNRLVATNLNHMLWADMVQNLEKEIVNILSDADPSELNYMLPKIGLGLLFYKVKDHAPINL---HRTRLLNVLADTRISDLNVTSRALVLDALQQLKLSAH 762
            LVALV   + V LL+ A  A AP+L +  LGL+ Y++  Y+S E     H AQE ENRFWT  AF FS A++++ DSP+ALG+W+   G L V+ FT  VH  DR LHR  I R P  R +V++S   H        ++K + ++  ++++D   + + +N+ML    V+  E+ I  +LS++   ELNY++  + L L+FYKVKDH+  +     RTR+L++L   R++DL +TSRA++LDAL  +KLSAH
Sbjct:   77 LVALVFVTLLVALLVMAFFAFAPLLCVTSLGLL-YLVGLYLSTESNWRWHDAQEFENRFWTLTAFLFSTAVLYIQDSPIALGRWNATFGMLLVVSFTSGVHFLDRFLHRKEISRKP--RLNVDASLPQHLVKVKETAEEKAKLVTDSVARIDRMYLPSTINNMLNLAQVKAQEQTIFRVLSESSKDELNYIINNVRLALVFYKVKDHSATSRPDQSRTRILDLLCSQRLADLTITSRAILLDALMVMKLSAH 325          
BLAST of mRNA_L-elsbetiae_contig5246.13365.1 vs. uniprot
Match: A0A329SZS0_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SZS0_9STRA)

HSP 1 Score: 176 bits (446), Expect = 1.150e-46
Identity = 111/259 (42.86%), Postives = 162/259 (62.55%), Query Frame = 1
Query:   13 EDPRHGLLVALVVALVGVLL-LIFAAL-AVAPVLVIV-LGLMTYVIWWYVSREDTSYMHHAQEHENRFWTTVAFCFSGALVFVHDSPVALGQWSPVLGFLFVMMFTFAVHSYDRQLHRSRIGRAPNFRSSV-ESSTMLH---SNVQDKCRRISVCLSKLDNRLVATNLNHMLWADMVQNLEKEIVNILSDADPSELNYMLPKIGLGLLFYKVKDHAPI--NLHRTRLLNVLADTRISDLNVTSRALVLDALQQLKLSAH 762
             +P    LV + V  +GVLL L+F A  A AP+L    LG++ YVI  Y+S E     H AQE ENRFWT  AF FS A++++ DSP+A+GQWS  LG + V  FT +VH +DR LHR +I R P  + +  + ST L    +  ++K + +  C+S++D   + + +N+M+    V+  E +I  IL+ A   ELNY+L    L LLFYKVKDH+ +  +  RT +L++L  TR++DL+V SRA++LDAL  +K+SAH
Sbjct:   37 NEPATSALVLVAVIFLGVLLTLVFMAFFAYAPLLCASWLGIL-YVIGLYLSTESKWRWHDAQEFENRFWTGTAFMFSAAVLYIKDSPLAVGQWSSSLGLVLVFGFTSSVHYFDRFLHRQKISRRPRLKLTTRQMSTNLFKYKATAEEKTQLVMECVSRIDRHYLPSTINNMINFAEVKRRELKIFRILAGAGKDELNYILNHTQLALLFYKVKDHSNVREDQSRTLILDLLCTTRLADLSVMSRAVLLDALMVMKISAH 294          
BLAST of mRNA_L-elsbetiae_contig5246.13365.1 vs. uniprot
Match: H3H5B0_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H5B0_PHYRM)

HSP 1 Score: 175 bits (444), Expect = 2.190e-46
Identity = 106/259 (40.93%), Postives = 157/259 (60.62%), Query Frame = 1
Query:   13 EDPRHGLLVALVVALVGVLL--LIFAALAVAPVLVIV-LGLMTYVIWWYVSREDTSYMHHAQEHENRFWTTVAFCFSGALVFVHDSPVALGQWSPVLGFLFVMMFTFAVHSYDRQLHRSRIGRAPNFRSSVESST----MLHSNVQDKCRRISVCLSKLDNRLVATNLNHMLWADMVQNLEKEIVNILSDADPSELNYMLPKIGLGLLFYKVKDHAPI--NLHRTRLLNVLADTRISDLNVTSRALVLDALQQLKLSAH 762
             +P +  LV + +  VGVLL  ++ A  A AP+L    LG+M YVI  Y+S E     H AQE ENRFWT  AF FS A++++ DSP+A+GQW+  LG + V  FT +VH +DR LHR  I R P  + +    +       +  ++K + +   +  +D   + + +N+M+    V+  E +I  IL+ A+  ELNY+L  I L LLFYKVKDH+ +  +  RT +L++L  TR++DL+V SRAL+LDAL  +K+SAH
Sbjct:   46 SEPANSALVLVGMLFVGVLLALVVMAFFAYAPLLCASWLGIM-YVIGLYLSTESKWRWHDAQEFENRFWTGTAFMFSAAVLYIKDSPLAVGQWNSTLGLVLVFGFTMSVHFFDRFLHRQEISRRPRLKEAARQFSHNLFKYKATAEEKTKLVMESVGSIDRHYLPSTINNMINLAEVKRRELKIFRILAGAERDELNYILNHIRLALLFYKVKDHSKVREDQSRTLILDLLCTTRLADLSVMSRALLLDALMVMKISAH 303          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5246.13365.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K785_9PHAE2.910e-16278.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3Z8_ECTSI1.830e-15896.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A2P4YCM6_9STRA7.370e-5142.25Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
A0A7S0FB27_9STRA2.720e-4940.94Hypothetical protein (Fragment) n=1 Tax=Rhizosolen... [more]
A0A662X9P1_9STRA3.360e-4841.92Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A225WYB2_9STRA2.130e-4741.70Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
A0A8K1FIM4_PYTOL2.900e-4740.00Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4C4B6_PYTIN5.310e-4741.67Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A329SZS0_9STRA1.150e-4642.86Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
H3H5B0_PHYRM2.190e-4640.93Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5246contigL-elsbetiae_contig5246:8840..12212 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score489.2
Seed ortholog evalue1.2e-135
Seed eggNOG ortholog2880.D7G3Z8
Hectar predicted targeting categorysignal anchor
EggNOG OGs28KJH@1,2QT0Y@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionDomain of unknown function DUF2183
Ec32 orthologEc-19_000660.3
Exons5
Model size768
Cds size768
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5246.13365.1prot_L-elsbetiae_contig5246.13365.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5246 8840..12212 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816539.9379492-CDS-L-elsbetiae_contig5246:8839..90281622816539.9379492-CDS-L-elsbetiae_contig5246:8839..9028Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5246 8840..9028 +
1691683633.0430992-CDS-L-elsbetiae_contig5246:8839..90281691683633.0430992-CDS-L-elsbetiae_contig5246:8839..9028Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5246 8840..9028 +
1622816539.9504178-CDS-L-elsbetiae_contig5246:9310..94691622816539.9504178-CDS-L-elsbetiae_contig5246:9310..9469Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5246 9311..9469 +
1691683633.058902-CDS-L-elsbetiae_contig5246:9310..94691691683633.058902-CDS-L-elsbetiae_contig5246:9310..9469Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5246 9311..9469 +
1622816539.9638784-CDS-L-elsbetiae_contig5246:10701..108721622816539.9638784-CDS-L-elsbetiae_contig5246:10701..10872Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5246 10702..10872 +
1691683633.0673888-CDS-L-elsbetiae_contig5246:10701..108721691683633.0673888-CDS-L-elsbetiae_contig5246:10701..10872Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5246 10702..10872 +
1622816539.9755244-CDS-L-elsbetiae_contig5246:11568..117451622816539.9755244-CDS-L-elsbetiae_contig5246:11568..11745Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5246 11569..11745 +
1691683633.0766022-CDS-L-elsbetiae_contig5246:11568..117451691683633.0766022-CDS-L-elsbetiae_contig5246:11568..11745Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5246 11569..11745 +
1622816539.9890118-CDS-L-elsbetiae_contig5246:12140..122121622816539.9890118-CDS-L-elsbetiae_contig5246:12140..12212Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5246 12141..12212 +
1691683633.0883534-CDS-L-elsbetiae_contig5246:12140..122121691683633.0883534-CDS-L-elsbetiae_contig5246:12140..12212Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5246 12141..12212 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5246.13365.1

>prot_L-elsbetiae_contig5246.13365.1 ID=prot_L-elsbetiae_contig5246.13365.1|Name=mRNA_L-elsbetiae_contig5246.13365.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=256bp
MPIGEDPRHGLLVALVVALVGVLLLIFAALAVAPVLVIVLGLMTYVIWWY
VSREDTSYMHHAQEHENRFWTTVAFCFSGALVFVHDSPVALGQWSPVLGF
LFVMMFTFAVHSYDRQLHRSRIGRAPNFRSSVESSTMLHSNVQDKCRRIS
VCLSKLDNRLVATNLNHMLWADMVQNLEKEIVNILSDADPSELNYMLPKI
GLGLLFYKVKDHAPINLHRTRLLNVLADTRISDLNVTSRALVLDALQQLK
LSAHKD
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mRNA from alignment at L-elsbetiae_contig5246:8840..12212+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5246.13365.1 ID=mRNA_L-elsbetiae_contig5246.13365.1|Name=mRNA_L-elsbetiae_contig5246.13365.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3373bp|location=Sequence derived from alignment at L-elsbetiae_contig5246:8840..12212+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCCTATAGGAGAGGACCCGCGGCATGGGCTGCTCGTGGCACTGGTGGT GGCCCTCGTGGGGGTGCTGCTACTCATCTTCGCCGCACTTGCGGTCGCGC CGGTGCTGGTGATCGTCCTGGGGCTGATGACGTACGTTATTTGGTGGTAC GTGTCGAGGGAGGACACCTCCTACATGCATCACGCGCAGGTGGGGGGGTC TTCTCTTCTTTTTCTCGGCAGGGGGTTATTATCTCGGAGAATCAGCTGTA TGTATGCGAGACACCGCGCGCCATGTGGCTCGTTTCAGGTCCTTCTTTTC CCCTCATGTTAATGGGCACCCCTCATGTTACGGGCAGAAATCGCGCCTTT TACATAGAACATAACGTCCTTTCTTCTCTCTCCTTCCCTCATGATATCGG CGAAAAATCTTGTCTATCTTATAATATAGTTTGAAAAAATCGCGTGATGG CTTTGATTCTATTTCTGGCAGGAACACGAGAACCGCTTCTGGACGACGGT GGCGTTTTGCTTCTCGGGGGCTCTGGTCTTCGTCCACGACAGTCCCGTGG CGCTCGGCCAGTGGTCTCCCGTGCTGGGCTTCTTGTTCGTCATGATGTTT ACCTTCGCGGTGCACAGCTATGACAGACAGGTGTGTGGGTGGGTGTGTTT GTGCGTGTGTTGCTGACAGTCCCGTTGTCCGTCGTGATGTTCACCTTCTC GGTGCACAGTACACAGCTACGACAGACAGATCTCTGTGTATGTGTGTGTG TGTGTGTGTGTTCTTAATTCAGCATCGATAGCGCCATTCAGTTGACCAAT GCAAAAAGACGCCAGCCTTTAGCAGGCACAAAACGTAGCAACGCCTATCT TTGGTGTGTGTTAGCATCGGGCGCTGACCGACTGGTCATATGTAAGGCAT CGGTCTGGATGGAGAGTTCTGAAAACACTCAATTTATCTTTTTCGTGTGG CCTGGGGTGAAGTCGGAGAAAGGGAGAGTTACGCAGATGCGCAGGCTTGC CGAGAGGACGGTGGTTAGGTGGGGGAGGCGTACGCAAGCGCGTAGACGGG GGCAGAGAAGAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGGGGG GGGGGGGGGGGGGGGGAGAGAGGGGGAGTGAAAACAGGGGGAGAAGATGA GTTTGTTCAAAAAAGAGAAAAANNNNNNNNNNGGGGGGGGGGAGGAGGGG GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG GGGGGGGGGGGGGGGGGCGAGAGGGAGAGAGAGGGAGATTGAGAACAGGC GAAGATTATGATTTTGTTCCAAATGAAGAAACAAAGCCCAGACCCGCAAG GTTAACTTCATATGCATCTATCTCTCTGTCTCTTGCACACATACACGAAG CGAGCAAGAGATGCCGAATTGAGTCACGCCCTCGATCGATCACCGTGCGT TTGCTTGTTTTGCTTGCTTTCTCGACCCCATCGTCTCCTCTTTCTTCCCT TGCAACCCTTACTCCTTTGCACTCCCATTGCCCATGTACATTCAGATCTT CATATTTGTTTTCCCTTTTGTTTTCCGACGCAATCAATCAATCAATCCGA CATTGGTTTTGCCCTCCATTTCCATCTCCCTCCTTTCCGACGCGGCCCTG CTACTGTGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC CGCGCCCCCCCCCCCCCCCCCCCCTCCCGGGTCGCCGCCACCACCCCCCA CCCCCNNNNNNNNNNCAATCAATCCATCAATCCGGCCTTGGTTTTGCCCC CCCTTTCCCCCCCCCCCCTTTCCGCCGCGGCCCTGCTCCTGGGCCCCCCC CCCCCCCCGTAGCTCCACCGATCGAGGATCGGCCGTGCCCCCAACTTCCG TTCCTCGGTGGAGAGCAGCACGATGCTCCACAGCAACGTCCAGGACAAGT GCCGCCGCATCTCGGTGTGCCTCAGCAAGCTAGACAACCGGCTCGTGGCT ACCAACCTCAACCACATGCTCTGGGCGGACATGGTAAGAGGGAGGCAGTT AGTAGTCTTCGCAGGTTTTAGTGGAAGAAATCATATGGGGTAAAAAAATA TGGAAACGGCTAATGAGGGGTCGGTCTAGGGTCAGGGTAAGGGTTGCGGA GCCCCTGTCTATTACTCCGTATTTCATGATTTCCTATTTAGACAGGAATT TTTCGTGAAGGCGGTCCGGGGTATTTAGGAAGAGAACGATTGCACGAAGG CGGTAGTAGCGTGTGGGGTGCTGGCGGCGTGATCGGGATCGCGAAAAAAC GGCTTCGAGGCGAGTGAAAATATAAAACACACGCGTGCTTGTGCTTGTTC ATGCGTGTGCAATACGCCAAGGAAGGAACCACTGTTCCGGTAGAACGATG GAAGAAGAGAGGGAGGAAGCAAGGGTGGTAGTGTTACATTGTAGGTTAGG ACGTCGGAGCGTTTTTTGTTTTGCTTGTTTCGTGGTTGCTTATTTTTTCT GTTTTTTTTTCTGGTTTTTGTCTTCTTTTTTTTTTCTTCCTATTTTAACA ATGGAATGTTTTGTGGCCGAGGTGTAGACCAGGTCATGCATCCTGACATC GCTGGACCCCCAACCGCTGTGCGTGCGTGCGTGTGTCCCGAAGGTGTAAA ACCTTGAGAAGGAGATCGTGAGCATGATTATGAACCCTCTTTGTACTGCG TGTGTGTGTGCGTGGATGTGTGCCTGAAGGTGCAAAATCTTGAGAAGGAG ATCGTGAACATCCTCAGCGACGCCGATCCGAGCGAGCTTAACTACATGCT GCCCAAGATCGGGCTCGGCCTGCTGTTCTACAAGGTCAAGGACCACGCAC CGATCAACCTGCACCGGACCAGGCTGCTCAACGTGCTCGCCGACACACGC ATCTCGGTAAGATAAAATGCATGATATGTATGATAGCATCTCGCATCTCG ATGAGATCAGATGGGAGTAAGATGGCATCTCGGTGAGATACAGATAGAGG ATGGCATCTTGGCGAGATAAATATGGTATAAGATCACATCTCGCATCTCG GTGAGATAAGATAATATGGCATCTCGGCGAGTTAAGATAGAAGCAAGATG GCATCTCGGTGAGATGAGTCGAAAGGCTGCTGCAGTTTCTACATGCCTCG CCCCTGCTGACCCCCCCCCCCCCCCAATACCTCTGCCCCCGGGTTAAATA CCCCCCGGTGATTGCTGCTTGGAGAACGCAGGGTCGTAACCCCTAAATGT CTCTGAGCACGAGTTAAATGCCTGCTGTTGATTGTTCTGTGGTCATGCCA GGATCTGAACGTGACGTCACGCGCGCTTGTGTTGGACGCGCTCCAGCAGC TCAAGCTCTCGGCGCACAAAGAC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig5246:8840..12212+

>mRNA_L-elsbetiae_contig5246.13365.1 ID=mRNA_L-elsbetiae_contig5246.13365.1|Name=mRNA_L-elsbetiae_contig5246.13365.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1536bp|location=Sequence derived from alignment at L-elsbetiae_contig5246:8840..12212+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCCTATAGGAGAGGACCCGCGGCATGGGCTGCTCGTGGCACTGGTGGT
GGCCCTCGTGGGGGTGCTGCTACTCATCTTCGCCGCACTTGCGGTCGCGC
CGGTGCTGGTGATCGTCCTGGGGCTGATGACGTACGTTATTTGGTGGTAC
GTGTCGAGGGAGGACACCTCCTACATGCATCACGCGCAGATGCCTATAGG
AGAGGACCCGCGGCATGGGCTGCTCGTGGCACTGGTGGTGGCCCTCGTGG
GGGTGCTGCTACTCATCTTCGCCGCACTTGCGGTCGCGCCGGTGCTGGTG
ATCGTCCTGGGGCTGATGACGTACGTTATTTGGTGGTACGTGTCGAGGGA
GGACACCTCCTACATGCATCACGCGCAGGAACACGAGAACCGCTTCTGGA
CGACGGTGGCGTTTTGCTTCTCGGGGGCTCTGGTCTTCGTCCACGACAGT
CCCGTGGCGCTCGGCCAGTGGTCTCCCGTGCTGGGCTTCTTGTTCGTCAT
GATGTTTACCTTCGCGGTGCACAGCTATGACAGACAGGAACACGAGAACC
GCTTCTGGACGACGGTGGCGTTTTGCTTCTCGGGGGCTCTGGTCTTCGTC
CACGACAGTCCCGTGGCGCTCGGCCAGTGGTCTCCCGTGCTGGGCTTCTT
GTTCGTCATGATGTTTACCTTCGCGGTGCACAGCTATGACAGACAGCTCC
ACCGATCGAGGATCGGCCGTGCCCCCAACTTCCGTTCCTCGGTGGAGAGC
AGCACGATGCTCCACAGCAACGTCCAGGACAAGTGCCGCCGCATCTCGGT
GTGCCTCAGCAAGCTAGACAACCGGCTCGTGGCTACCAACCTCAACCACA
TGCTCTGGGCGGACATGCTCCACCGATCGAGGATCGGCCGTGCCCCCAAC
TTCCGTTCCTCGGTGGAGAGCAGCACGATGCTCCACAGCAACGTCCAGGA
CAAGTGCCGCCGCATCTCGGTGTGCCTCAGCAAGCTAGACAACCGGCTCG
TGGCTACCAACCTCAACCACATGCTCTGGGCGGACATGGTGCAAAATCTT
GAGAAGGAGATCGTGAACATCCTCAGCGACGCCGATCCGAGCGAGCTTAA
CTACATGCTGCCCAAGATCGGGCTCGGCCTGCTGTTCTACAAGGTCAAGG
ACCACGCACCGATCAACCTGCACCGGACCAGGCTGCTCAACGTGCTCGCC
GACACACGCATCTCGGTGCAAAATCTTGAGAAGGAGATCGTGAACATCCT
CAGCGACGCCGATCCGAGCGAGCTTAACTACATGCTGCCCAAGATCGGGC
TCGGCCTGCTGTTCTACAAGGTCAAGGACCACGCACCGATCAACCTGCAC
CGGACCAGGCTGCTCAACGTGCTCGCCGACACACGCATCTCGGATCTGAA
CGTGACGTCACGCGCGCTTGTGTTGGACGCGCTCCAGCAGCTCAAGCTCT
CGGCGCACAAAGACGATCTGAACGTGACGTCACGCGCGCTTGTGTTGGAC
GCGCTCCAGCAGCTCAAGCTCTCGGCGCACAAAGAC
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