mRNA_L-elsbetiae_contig5240.13360.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5240.13360.1 vs. uniprot
Match: A0A6H5J7N3_9PHAE (E1 ubiquitin-activating enzyme n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J7N3_9PHAE) HSP 1 Score: 389 bits (999), Expect = 5.960e-125 Identity = 203/232 (87.50%), Postives = 215/232 (92.67%), Query Frame = 1 Query: 19 DESAYATALGKIDVPEFKPVDGVKIATTEAEAKGXXXXXXXXXXXXXQLEDVDAQCERMLGELPKREDMKDFRLEVVEFDKDVDDHMEFVTAASNLRARVYKIPEADMHRSRQIAGKIIPAIATTTALVTGLVCMEVYKIMQEKPLESYKNWFLNLALPQFSCSEPLPPAKTTTIIKGSEWRWSAWDSLELEGADITLQQLFDIMKDKYGLEVTMLSHGVSILYSFFANKKK 714 D++ YA+ L +++VP FKPVDGVKIATTEAEAK XXXXX QLEDVDAQCERMLGELPK DMKDFRLEVVEFDKD+D+HMEFVTAASNLRARVYKIPEADMHRSRQIAGKIIPAIATTTALVTGLV MEVYKIMQEKPLESYKNWFLNLALPQFSCSEPLPPAKT T+IKGSEW+WSAWDSLELEGADITLQQLFDIMK+KYGLEVTMLSHGVSILYSFFA+KKK Sbjct: 821 DDAVYASTLSQMEVPVFKPVDGVKIATTEAEAK---EQATGXXXXXAQLEDVDAQCERMLGELPKPADMKDFRLEVVEFDKDLDEHMEFVTAASNLRARVYKIPEADMHRSRQIAGKIIPAIATTTALVTGLVSMEVYKIMQEKPLESYKNWFLNLALPQFSCSEPLPPAKTATMIKGSEWKWSAWDSLELEGADITLQQLFDIMKEKYGLEVTMLSHGVSILYSFFASKKK 1049
BLAST of mRNA_L-elsbetiae_contig5240.13360.1 vs. uniprot
Match: A0A836CIM1_9STRA (Ubiquitin-activating enzyme E1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIM1_9STRA) HSP 1 Score: 296 bits (758), Expect = 2.160e-90 Identity = 163/235 (69.36%), Postives = 190/235 (80.85%), Query Frame = 1 Query: 19 DESAYATALGKIDVPEFKPVDGVKIATTEAEAKGXXXXXXXXXXXXXQ---LEDVDAQCERMLGELPKREDMKDFRLEVVEFDKDVDDHMEFVTAASNLRARVYKIPEADMHRSRQIAGKIIPAIATTTALVTGLVCMEVYKIMQEKPLESYKNWFLNLALPQFSCSEPLPPAKTTTIIKGSEWRWSAWDSLELEGADITLQQLFDIMKDKYGLEVTMLSHGVSILYSFFANKKK 714 D++A AL + VP+F P +GVKIA TEAEAK XXXXXXXXXXXXX + D DAQC ++ LP+ + FRL VEFDKDVD HM VTAASNLRAR YKIPEADMHRSR IAGKIIPAIATTTALVTGLVC+E+ K+ QEKPLE+YKNWFLNLALPQF+CSEP+PPA T +KG EWRWSAWD ++++ DITL LF +++D+YGLEVTMLSHGVSIL+SFFA+KKK Sbjct: 740 DDAAVLAALSSVIVPDFTPAEGVKIAVTEAEAKEXXXXXXXXXXXXXXXXFMMDTDAQCAALVDALPEPASLGAFRLAAVEFDKDVDAHMVLVTAASNLRARCYKIPEADMHRSRLIAGKIIPAIATTTALVTGLVCLELIKVAQEKPLEAYKNWFLNLALPQFACSEPIPPATTAVKLKGREWRWSAWDCIDVDRGDITLAALFALLRDEYGLEVTMLSHGVSILFSFFASKKK 974
BLAST of mRNA_L-elsbetiae_contig5240.13360.1 vs. uniprot
Match: A0A7S2G964_9STRA (E1 ubiquitin-activating enzyme n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G964_9STRA) HSP 1 Score: 265 bits (677), Expect = 1.000e-78 Identity = 153/239 (64.02%), Postives = 183/239 (76.57%), Query Frame = 1 Query: 19 DESAYATALGKIDVPEFKPVDGVKIATTEAEAKGXXXXXXXXXXXXX---QLEDVDAQCERMLGELPKREDMKDFRLEVVEFDKDVDDHMEFVTAASNLRARVYKIPEADMHRSRQIAGKIIPAIATTTALVTGLVCMEVYKIMQEKPLESYKNWFLNLALPQFSCSEPLPPAKTTTIIKGS----EWRWSAWDSLELEGADITLQQLFDIMKDKYGLEVTMLSHGVSILYSFFANKKK 714 D++ + L + VP F P DGVKI T E XXXXXXXXXXXXX +L DVDAQC+ ++ +LP + F+L VEFDKD+D+HMEFVTAASNLRAR YKIPEADMHRSR IAGKIIPAIATTTALVTGLVC+E+YK++Q KP+E+YKN F+NLA+P F+ SEP PPA T I+ EW+WSAWD L+++ DITL+QL M+D YGLE+TMLSHGVSILYSFF NKKK Sbjct: 759 DDAYFLAFLPNVVVPGFTPKDGVKIKTPEEXXXXXXXXXXXXXXXXXXDEELMDVDAQCDEIIAQLPTPASLAGFQLNPVEFDKDIDEHMEFVTAASNLRARNYKIPEADMHRSRLIAGKIIPAIATTTALVTGLVCLELYKVIQSKPVEAYKNGFVNLAIPVFAFSEPQPPATTLAKIQKDGAPFEWKWSAWDRLDIKLGDITLKQLIAHMEDAYGLELTMLSHGVSILYSFFQNKKK 997
BLAST of mRNA_L-elsbetiae_contig5240.13360.1 vs. uniprot
Match: A0A7S2B3Z9_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B3Z9_9STRA) HSP 1 Score: 246 bits (627), Expect = 7.290e-75 Identity = 127/242 (52.48%), Postives = 170/242 (70.25%), Query Frame = 1 Query: 1 MSSIWQDESAYATALGKIDVPEFKPVDGVKIATTEAEAKGXXXXXXXXXXXXXQLEDVDAQCERMLGELPKREDMKDFRLEVVEFDKDVDDHMEFVTAASNLRARVYKIPEADMHRSRQIAGKIIPAIATTTALVTGLVCMEVYKIMQEKPLESYKNWFLNLALPQFSCSEPLPPAKTTTII----KGSEWRWSAWDSLELEGADITLQQLFDIMKDKYGLEVTMLSHGVSILYSFFANKKK 714 +S W+D + + + + VP F P DG+KI+ E E + D +A C+ +L +P + + F + ++FDKDVD+HM FVTA SNLRAR Y+IPEADMHRSR IAGKIIPAIATTTALVTGLVC+E+YK++Q+KPLE++KN F+NLA+P F+ SEP+PPAKT I + EW +SAWDS ++ ++TL++L D ++D YGLEVTMLSHGVSIL+SFF N+KK Sbjct: 277 ISGTWED-TYFVRVVSNVQVPHFVPKDGMKISANEKEEEESKNQSVDTM-------DTEAMCQHILSRIPPPKALAGFHVTPIDFDKDVDNHMLFVTACSNLRARNYQIPEADMHRSRLIAGKIIPAIATTTALVTGLVCIELYKVVQKKPLEAFKNSFVNLAIPLFALSEPIPPAKTLAKITKEGRPFEWHFSAWDSFDVRLGNLTLKELVDHLQDDYGLEVTMLSHGVSILWSFFLNQKK 510
BLAST of mRNA_L-elsbetiae_contig5240.13360.1 vs. uniprot
Match: A0A7S4D9B8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D9B8_HETAK) HSP 1 Score: 246 bits (629), Expect = 1.010e-74 Identity = 137/234 (58.55%), Postives = 168/234 (71.79%), Query Frame = 1 Query: 16 QDESAYATALGKIDVPEFKPVDGVKIATTEAEAKGXXXXXXXXXXXXXQLEDVDAQCERMLGELPKREDMKDFRLEVVEFDKDVDDHMEFVTAASNLRARVYKIPEADMHRSRQIAGKIIPAIATTTALVTGLVCMEVYKIMQE-KPLESYKNWFLNLALPQFSCSEPLPPAKTTTIIKGSEWRWSAWDSLELEGADITLQQLFDIMKDKYGLEVTMLSHGVSILYSFFANKKK 714 +D + + L + VPEF P GVKIA E E XXXXXXX D++ Q ++++ ELP ++ FRL V+FDKD+DDHM + A SNLRAR Y IPEAD+HRSR IAGKIIPAI+TTTALV GLVC+E+YK+ Q KPL +YKN F NLALP F+ SEP PPAKTT ++G EW WSAWD +++ D+TL+Q D +D+ GLEVTMLSHGVSILYSFFANKKK Sbjct: 325 RDAAYFQGVLPNVMVPEFVPRRGVKIAADEKEXXXXXXXXXXSISAT----DLEGQAKQIIEELPSPSELAGFRLVPVDFDKDLDDHMTLIAATSNLRARNYAIPEADLHRSRLIAGKIIPAISTTTALVAGLVCLELYKVFQGGKPLAAYKNGFANLALPLFAFSEPQPPAKTTGRLRGREWEWSAWDRIDVRLGDVTLKQFLDHFQDELGLEVTMLSHGVSILYSFFANKKK 554
BLAST of mRNA_L-elsbetiae_contig5240.13360.1 vs. uniprot
Match: A0A7R9WKT0_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WKT0_9STRA) HSP 1 Score: 244 bits (623), Expect = 9.620e-74 Identity = 133/236 (56.36%), Postives = 173/236 (73.31%), Query Frame = 1 Query: 19 DESAYATALGKIDVPEFKPVDGVKIATTEAEAKGXXXXXXXXXXXXXQLEDVDAQCERMLGELPKREDMKDFRLEVVEFDKDVDDHMEFVTAASNLRARVYKIPEADMHRSRQIAGKIIPAIATTTALVTGLVCMEVYKIM----QEKPLESYKNWFLNLALPQFSCSEPLPPAKTTTIIKGSEWRWSAWDSLELEGADITLQQLFDIMKDKYGLEVTMLSHGVSILYSFFANKKK 714 DE + +AL + VP+F P +GVKIA +AEAK XXXXXXXX +EDVDA+C+R+L LPK ++ F+L V+FDKDVD+HM FVTA SNLRA Y IP D+HRSR IAG+IIPAIATTTALV GLVC+E+YKI+ ++ +++ KN F+NLA+P + SEP P+ T ++KG EW W+AWDS+++ DITL++ + +Y LEVTMLS GVSIL+SFFANKKK Sbjct: 333 DEEYFRSALKNVIVPDFVPREGVKIAANDAEAK---ENEXXXXXXXXDMEDVDAECDRILASLPKPSELAGFKLNPVDFDKDVDEHMRFVTACSNLRALNYSIPTEDVHRSRAIAGRIIPAIATTTALVAGLVCLELYKIVGTAGRDLKIDALKNGFVNLAVPFMTLSEPTAPSTTKAVLKGKEWNWTAWDSIDMNMGDITLREFVTYFEKEYNLEVTMLSQGVSILFSFFANKKK 565
BLAST of mRNA_L-elsbetiae_contig5240.13360.1 vs. uniprot
Match: A0A7S2RXQ6_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RXQ6_9STRA) HSP 1 Score: 248 bits (632), Expect = 1.330e-73 Identity = 126/236 (53.39%), Postives = 165/236 (69.92%), Query Frame = 1 Query: 19 DESAYATALGKIDVPEFKPVDGVKIATTEAEAKGXXXXXXXXXXXXXQLEDVDAQCERMLGELPKREDMKDFRLEVVEFDKDVDDHMEFVTAASNLRARVYKIPEADMHRSRQIAGKIIPAIATTTALVTGLVCMEVYKIM----QEKPLESYKNWFLNLALPQFSCSEPLPPAKTTTIIKGSEWRWSAWDSLELEGADITLQQLFDIMKDKYGLEVTMLSHGVSILYSFFANKKK 714 DE + L + VPEF P +GVKIA E+EAK +++D +C+ ++ +LPK ++ F++ +EFDKDVD+HM FVTA SNLRA Y IP D HRSR IAG+IIPAIATTTALVTGLVC+++YK++ +E L+ +KN F+NLA+P + SEP PP KT I+KG EW W+AWDSL+LE DITL++L D +Y L+++MLSHGVSILYSFFANKKK Sbjct: 523 DEEYFRQVLDNVIVPEFTPANGVKIAANESEAKQQNDEAPG--------DNIDDECDEIIAQLPKASELAGFKVNPIEFDKDVDEHMLFVTACSNLRALNYWIPTEDTHRSRAIAGRIIPAIATTTALVTGLVCLDLYKVIGSARKELTLDMFKNAFINLAIPFMTLSEPTPPEKTKCILKGKEWNWTAWDSLDLELGDITLKELMDHFATEYNLDISMLSHGVSILYSFFANKKK 750
BLAST of mRNA_L-elsbetiae_contig5240.13360.1 vs. uniprot
Match: I2CSG2_NANGC (E1 ubiquitin-activating enzyme n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CSG2_NANGC) HSP 1 Score: 249 bits (637), Expect = 4.180e-73 Identity = 123/228 (53.95%), Postives = 165/228 (72.37%), Query Frame = 1 Query: 28 AYATALGKIDVPEFKPVDGVKIATTEAEAKGXXXXXXXXXXXXXQLEDVDAQCERMLGELPKREDMKDFRLEVVEFDKDVDDHMEFVTAASNLRARVYKIPEADMHRSRQIAGKIIPAIATTTALVTGLVCMEVYKIMQEKPLESYKNWFLNLALPQFSCSEPLPPAKTTTIIKGSEWRWSAWDSLELEGADITLQQLFDIMKDKYGLEVTMLSHGVSILYSFFANKK 711 A AL + VP+F P DGVKIA T+ EAK D++A+CE ++ LP + F L+ ++FDKDVD HM VTA SNLRA YKIPEADMH++RQIAGKIIPAIATTTALVTGLVC+E+YK++ +KP+E +K+ F+NLALP F+ SEP PPA T ++KG EW+WSAWD +++EG D+TL++ M++++GLEV+MLSHGVS+L+S ++K Sbjct: 766 AVKAALENVMVPDFSPQDGVKIAVTDTEAKQQAEQGGSDGGAVTSSLDLEARCEAIIASLPPPSALTGFTLQPIDFDKDVDAHMAVVTATSNLRAANYKIPEADMHKTRQIAGKIIPAIATTTALVTGLVCLELYKLVLKKPIEDFKSAFVNLALPLFTFSEPQPPASQTAVVKGEEWKWSAWDRIDIEG-DLTLREFLKYMEEQFGLEVSMLSHGVSLLHSSLTSRK 992
BLAST of mRNA_L-elsbetiae_contig5240.13360.1 vs. uniprot
Match: A0A7S1BIN6_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BIN6_9STRA) HSP 1 Score: 240 bits (612), Expect = 6.610e-73 Identity = 121/236 (51.27%), Postives = 163/236 (69.07%), Query Frame = 1 Query: 19 DESAYATALGKIDVPEFKPVDGVKIATTEAEAKGXXXXXXXXXXXXXQLEDVDAQCERMLGELPKREDMKDFRLEVVEFDKDVDDHMEFVTAASNLRARVYKIPEADMHRSRQIAGKIIPAIATTTALVTGLVCMEVYKIM----QEKPLESYKNWFLNLALPQFSCSEPLPPAKTTTIIKGSEWRWSAWDSLELEGADITLQQLFDIMKDKYGLEVTMLSHGVSILYSFFANKKK 714 +E + L +I +P+F P GVKI T E E + DVD++C+++ ELP + FRLE++EFDKD+D+HM FVTA SNLRA Y+IP D H+SR IAG+IIPAIATTTALVTGL+C+E+YK++ +E P+E+YKN FLNLA+P + +EP PAKT ++KG EW WSAWDS+ + DITL++ + + +Y LE+ MLS+GVS+LYSFFANKKK Sbjct: 253 EEEYFQQFLPEIIIPDFTPKQGVKIQTKEDEKEEEAPPADM---------DVDSECDKIFAELPAPSSLAGFRLELIEFDKDIDEHMLFVTACSNLRAINYQIPTEDTHKSRAIAGRIIPAIATTTALVTGLICLEMYKVVGSANKELPIEAYKNSFLNLAIPFMTSTEPQGPAKTKAMLKGKEWEWSAWDSIHMNIGDITLKEFMEYFEKEYNLEINMLSYGVSLLYSFFANKKK 479
BLAST of mRNA_L-elsbetiae_contig5240.13360.1 vs. uniprot
Match: A0A6A3N8N5_9STRA (E1 ubiquitin-activating enzyme n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3N8N5_9STRA) HSP 1 Score: 248 bits (633), Expect = 2.230e-72 Identity = 124/232 (53.45%), Postives = 161/232 (69.40%), Query Frame = 1 Query: 19 DESAYATALGKIDVPEFKPVDGVKIATTEAEAKGXXXXXXXXXXXXXQLEDVDAQCERMLGELPKREDMKDFRLEVVEFDKDVDDHMEFVTAASNLRARVYKIPEADMHRSRQIAGKIIPAIATTTALVTGLVCMEVYKIMQEKPLESYKNWFLNLALPQFSCSEPLPPAKTTTIIKGSEWRWSAWDSLELEGADITLQQLFDIMKDKYGLEVTMLSHGVSILYSFFANKKK 714 D + L +I VPEF P GVKIA ++AE K LED DAQCE +L ELPK D+ +R+E +EFDKD D HME + + SNLRAR YKIPE DMH+SR IAGKIIPAIATTTALVTGLVC E K+ Q+KPL+ YKN F+NLALP F+ +EP+ P T T++KG E++W+AWD LE++ D+TL++ + +Y EVTMLS+GV+ILY+ ++ K + Sbjct: 824 DRDTFTQVLAEIHVPEFSPRKGVKIAASDAELKEGGAAPG--------LEDADAQCESILNELPKPSDLAGYRMEPIEFDKDDDSHMEVIVSVSNLRARSYKIPEEDMHKSRFIAGKIIPAIATTTALVTGLVCFEFLKVFQDKPLDHYKNGFVNLALPLFTFAEPIEPKATKTMLKGEEYKWTAWDRLEVDRGDMTLKEFLAYFEKEYDAEVTMLSYGVTILYAMYSQKSR 1047 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5240.13360.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5240.13360.1 >prot_L-elsbetiae_contig5240.13360.1 ID=prot_L-elsbetiae_contig5240.13360.1|Name=mRNA_L-elsbetiae_contig5240.13360.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=238bp MSSIWQDESAYATALGKIDVPEFKPVDGVKIATTEAEAKGGGRGGGGGGGback to top mRNA from alignment at L-elsbetiae_contig5240:10709..12724- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5240.13360.1 ID=mRNA_L-elsbetiae_contig5240.13360.1|Name=mRNA_L-elsbetiae_contig5240.13360.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2016bp|location=Sequence derived from alignment at L-elsbetiae_contig5240:10709..12724- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5240:10709..12724- >mRNA_L-elsbetiae_contig5240.13360.1 ID=mRNA_L-elsbetiae_contig5240.13360.1|Name=mRNA_L-elsbetiae_contig5240.13360.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1428bp|location=Sequence derived from alignment at L-elsbetiae_contig5240:10709..12724- (Laminarionema elsbetiae ELsaHSoW15)back to top |