mRNA_L-elsbetiae_contig5210.13312.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5210.13312.1
Unique NamemRNA_L-elsbetiae_contig5210.13312.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig5210.13312.1 vs. uniprot
Match: D8LD68_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD68_ECTSI)

HSP 1 Score: 687 bits (1773), Expect = 5.540e-246
Identity = 344/441 (78.00%), Postives = 371/441 (84.13%), Query Frame = 1 
Query:    1 YVDGSGANVPSSLSFPNVAAMAYTSDDGYEELHLFFSVAWFDLGSWAWGHFFVEWGTRGVFQASESRRGERRFYLAGMVDDLFLATGQFVYDGDTNEGAEVRVTSSDMAAFASFESSLNSQFGSDIVTEWPFNGLGILEVVDSAFVLDIADADIALLPKGQQVGGDAPPGLARIRRPRHDGRVQQRRLGSGWPP*LGAFQPWHLLVAEPHPLPPGQGRPRRIGLHHRGRRDNYNWRSLTSPGITGHFNKFCLASAAANLM--------------------TCAPGDNTFDGVQTDVSLISSVSQFHSITTTEGTNGFSGFQIVPRFATFVYFNCVTGDCLVQENEWIRRVTCGCSNLDPSQDKGSCSLCDDIQSFGTVEALYAAEAATTSRQILMGRRDKYMFHQANVVQQSGIPGGSLLAYWYQEVMATLTNFIAFPVTV 1263
            YVD SGANVPSSLSFP+VAAMAY SDDGYEELHLFFSVAWFD GSWAW HFF+EWGT+GVFQ      GERRFYLAGMVDDLFLATG F YDGDTNEGAEVR+TSSDM+AFASFESSLNSQ+GS IVTEWPFNGLGILEVVDSAFVLDIA+ADIALLPKGQQV GDAP  LA  RRPRHDGRV++R LG G    +GA QP H+LVAEPHPL P +GRP  +GLHHRGRRDNYNWRSLTSPGITGHFNKFCL SA +NLM                    TCAPGDNT+DGVQTDVSLISSVSQFHSI TTE  NGFSGFQ VPR+ TFVYFNC TG+CLV ENE+IRR TCGCSNL+P++D+GSCSLCDDIQSFG VEALY  EA TT+RQILMGRRDKYMFHQANVVQ S +PGGSLLAYWYQEVM   + FI+FPVT+
Sbjct:   48 YVDDSGANVPSSLSFPSVAAMAYASDDGYEELHLFFSVAWFDTGSWAWAHFFIEWGTKGVFQ------GERRFYLAGMVDDLFLATGVFEYDGDTNEGAEVRLTSSDMSAFASFESSLNSQYGSSIVTEWPFNGLGILEVVDSAFVLDIANADIALLPKGQQVSGDAPRRLAGYRRPRHDGRVRRRLLGRGRSARMGAGQPGHVLVAEPHPLAPLEGRPGGVGLHHRGRRDNYNWRSLTSPGITGHFNKFCLTSATSNLMKDSCMRVYKPRGLRTLCQTLTCAPGDNTYDGVQTDVSLISSVSQFHSIYTTESNNGFSGFQNVPRYPTFVYFNCATGNCLVNENEFIRRSTCGCSNLNPAEDQGSCSLCDDIQSFGNVEALYETEAKTTTRQILMGRRDKYMFHQANVVQNSAVPGGSLLAYWYQEVMELFSQFISFPVTL 482
[Close]
BLAST of mRNA_L-elsbetiae_contig5210.13312.1 vs. uniprot
Match: A0A6H5K3S3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3S3_9PHAE)

HSP 1 Score: 573 bits (1478), Expect = 4.030e-196
Identity = 317/481 (65.90%), Postives = 343/481 (71.31%), Query Frame = 1 
Query:    1 YVDGSGANVPSSLSFPNVAAMAYTSDDGYEELHLFFSVAWFDLGSWAWGHFFVEWGTRGVFQASESRRGERRFYLAGMVDDLFLATGQFVYDGDTNEGAEVRVTSSDMAAFASFESSLNSQFGSDIVTEWPFNGLGILEVVDSAFVLDIADADIALLPKGQQVGGDA-----PPGLARIRRPRHDGRVQQRRLGS-------GWP-P*LGAFQPW------HLL---VAEPHPLPPGQGRPRRIGLHHRGRRDNYNWRSLTSPGITGHFNKFCLASAAANLMTCAPGDNTFDGVQTDVSLISSVSQFHSITTTEGTNGFSGFQIVPRFATFVYFNCVTGDCLVQENEWIRRVTCGCSNLDPSQDKGSCSLCDDIQSFGTVEALYAAEAATTSRQILMGRRDKYMFHQANVV---------------------------------------QQSGIPGGSLLAYWYQEVMATLTNFIAFPVT 1260
            YVD SGANVPSSLSFP+VAAMAY S+DGYEELHLFFSVAWFD GSWAW HFF+EWGT+GVFQ      GERRFYLAGMVDDLFLATG F YDGDTNEGAEVR+TSSDM+AFASFESSLNSQ+GS IVTEWPFNGLGIL VV+SAFVLDIA+ADIALLPKGQQV GD      P G      P   G   +   GS       GW    L  F  W      HL    + E        G  +   L      DNYNWRSLTSPGITG FNKFCL SA +NLMTCAPGDNT+DGVQTDVSLISSVSQFHSI TTE  NGFSGFQIVPR+ATFVYFNC TGDCLV ENE+IRR TCGCSNL+P++DKGSCSLCDDIQSFG+VEALY  EA TT+RQILMGRRDKYMFHQA++V                                       Q S +PGGSLLAYWYQEVM  L+ FI+FPVT
Sbjct:  205 YVDDSGANVPSSLSFPSVAAMAYASNDGYEELHLFFSVAWFDTGSWAWAHFFIEWGTKGVFQ------GERRFYLAGMVDDLFLATGVFEYDGDTNEGAEVRLTSSDMSAFASFESSLNSQYGSSIVTEWPFNGLGILNVVNSAFVLDIANADIALLPKGQQVNGDGIDPQLPVGWLATAVP---GMTAEFAAGSWSTDGLLGWVLANLDTFW-WQSHTLSHLARDDLGESDCSIEDGGNAQIAVLTGMFNSDNYNWRSLTSPGITGLFNKFCLTSATSNLMTCAPGDNTYDGVQTDVSLISSVSQFHSIYTTESNNGFSGFQIVPRYATFVYFNCATGDCLVNENEFIRRKTCGCSNLNPAEDKGSCSLCDDIQSFGSVEALYETEAKTTTRQILMGRRDKYMFHQASIVPYCPTFHPPTIRLLAGFPIFVPHTLVAXXXXXXXXXXXVQNSAVPGGSLLAYWYQEVMKLLSQFISFPVT 675
[Close]
BLAST of mRNA_L-elsbetiae_contig5210.13312.1 vs. uniprot
Match: D7FLI7_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLI7_ECTSI)

HSP 1 Score: 330 bits (845), Expect = 3.360e-101
Identity = 198/464 (42.67%), Postives = 265/464 (57.11%), Query Frame = 1 
Query:    1 YVDGSGANVPSSLSFP--NVAAMAYTSDDGYEELHLFFSVAWFDLGSWAWGHFFVEWGTRGVFQASESRRGERRFYLAGMVDDLFLATGQFVYDGDTNEGA-EVRVTSSDMAAFASFESSLNSQF-GSDIVTEWPFNGLGILEVVDSA-----FVLDIADADIALLPKGQQVGGDAPPGLARIRRPRHDGRVQQRRLGSG----------------WPP*LGAFQPWHLLV-------AEPHPLPPGQGRPRRIGLHHRGRRDNYNWRSLTSPGITGHFNKFCLASAAANLMTCAPGDNTFDGVQTDVS-LISSVSQFHSITTTEGTNGFSGFQIVPRFATFVYFNCVTGDCLVQENEWIRRVTCGCSNLDPSQDKGSCSL----------CDDIQSFGTVEALYAAEAATTSRQILMGRRDKYMFHQANVVQQSGIPGG--SLLAYWYQEVMATLTNFIAFPV 1257
            YVDG      S  +    N A ++YT  DG+EELH+FF++ WFD G+W W HFF EW T+G+F       GERRFYLA +VDDLFL+T +F YDG+ NE A   R T  D+      + +LN+Q+ GSDI+TE+ FNG GI E V  +     +V +  +  + +  KG +   D    +        +  + Q+ +  G                + P    +   H L+        E   +    G  +   +      DNYNWRS+ SPGITG FN+ CL SAA NLM C PGDNTFDG  +  + L++  +QFHSI +T   NG+ G QIVPRFAT+VYFNCVTGDCLV+ENE+IRR  C C+ LDPS    +C+             DIQSFG +EAL+ AEA+TT+R +L GRRDKYMFHQANV+    +  G  SLL YWY+ V+   ++++ FPV
Sbjct:  255 YVDGDSEPYLSGAAGDQENAAMLSYTGADGHEELHVFFTIGWFDAGAWPWAHFFNEWATKGIFM------GERRFYLAAVVDDLFLSTPEFEYDGEMNEAALSQRCTGEDLTNLLRVQEALNTQYSGSDIITEFAFNGAGIAEHVSQSVDGITYVPNYEETMVTI--KGTKWYEDGQVNVHDTNWLATNVPLMQQDMADGTWEANDDLLAGVLSYLYKP-SSFYHGHHTLIHLSRDQLRESDCVTEDTGNVQIALMTGMWDSDNYNWRSMVSPGITGLFNENCLDSAAQNLMVCYPGDNTFDGTVSGAAILVNEDNQFHSIYSTVAINGYDGIQIVPRFATYVYFNCVTGDCLVKENEYIRRFVCECTPLDPSIADYTCTSTAAECIGTDGATDIQSFGDIEALFDAEASTTTRYMLTGRRDKYMFHQANVIPAGDVGDGTQSLLDYWYERVLEVYSSYVTFPV 709
[Close]
BLAST of mRNA_L-elsbetiae_contig5210.13312.1 vs. uniprot
Match: A0A6H5K730_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K730_9PHAE)

HSP 1 Score: 326 bits (835), Expect = 2.570e-100
Identity = 199/442 (45.02%), Postives = 255/442 (57.69%), Query Frame = 1 
Query:   49 NVAAMAYTSDDGYEELHLFFSVAWFDLGSWAWGHFFVEWGTRGVFQASESRRGERRFYLAGMVDDLFLATGQFVYDGDTNEG-AEVRVTSSDMAAFASFESSLNSQFGSDIVTEWPFNGLGILEVVDSAFVLDIADADIALLPKGQQV--GGDAPPGLARIRRPRH-DGRVQQRRLGS---GWPP*LGAFQP---------WH-----------LLVAEPHPLPPGQGRPRRI-GLHHRGRRDNYNWRSLTSPGITGHFNKFCLASAAANLMTCAPGDNTFDGVQTD-VSLISSVSQFHSITTTEGTNGFSGFQIVPRFATFVYFNCVTGDCLVQENEWIRRVTCGCSNLDPS-------QDKGSCSLCDD------IQSFGTVEALYAAEAATTSRQILMGRRDKYMFHQANVVQQSGIPGG-SLLAYWYQEVMATLTNFI 1245
            ++AA+ +  +DG EE+H+FF++AWF + SWAW H+ +EW T+GVFQ      GERRF+L  MVDD FL T  FVY+G +N    E R++  ++  F S   +LN  + ++I+TE+PFN LGILE  ++ +     DAD ALL KG+     GD   GLA  + P      V    L +    W       Q          WH           L   +      G  +   I GL      D Y WRS+T+PGITG +NK CL SA  NL+TCAPGDNT+ G  T  VSLIS VSQFHSI TTE  NG +GFQIVPRFATFVY+NC T DCLV EN +IRR  CGC+++DP         D   C   +D      +Q+FGT +AL+  EA TT+R IL GRRDKYMFHQANVV  S   G  SLL YWY+ V+  +  ++
Sbjct:  228 SMAAVTFKGEDGSEEMHVFFAMAWFHMESWAWAHYIMEWATQGVFQ------GERRFWLGAMVDDHFLGTNTFVYNGGSNASDEEERISGEELRDFLSATKALNELYNAEIITEFPFNALGILEKAETKYTFTFEDADAALLAKGEPPVDNGDGTVGLAPTKTPEDWFNTVTMEGLTAEFDSWKEKDDLLQASLDMKDDFFWHSHTLSHQARDNLGQVDCESEDGGNAQIAVITGLFDV---DTYGWRSMTTPGITGFYNKNCLKSAMDNLITCAPGDNTYIGAPTTTVSLISDVSQFHSIYTTEEINGLAGFQIVPRFATFVYYNCRTSDCLVLENLFIRRTVCGCTDVDPGTIDNLNIDDIAGCDFSEDSLCPNGLQAFGTADALFDVEAETTTRWILSGRRDKYMFHQANVVPTSTPLGEMSLLEYWYEVVLKKMALYL 660
[Close]
BLAST of mRNA_L-elsbetiae_contig5210.13312.1 vs. uniprot
Match: D7G056_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G056_ECTSI)

HSP 1 Score: 334 bits (856), Expect = 1.300e-99
Identity = 210/480 (43.75%), Postives = 268/480 (55.83%), Query Frame = 1 
Query:    1 YVDGSG---ANVPSSLSFPNVAAMA-YTSDDGYEELHLFFSVAWFDLGSWAWGHFFVEWGTRGVFQASESRRGERRFYLAGMVDDLFLATGQFVYDGDTNEGAEVRVTSSDMAAFASFESSLNSQFGSDIVTEWPFNGLGILEVVDSAFVLDI-ADADIALLPKGQQVGGDAPPGLARIRRPRH---DGRVQQRRLGSGWPP*LGAFQPWHLLVA----------EPHPLP--------------PGQGRPRRIGLHHRGRRDNYNWRSLTSPGITGHFNKFCLASAAANLMTCAPGDNTFDGVQ-TDVSLISSVSQFHSITTTEGTNGFSGFQIVPRFATFVYFNCVTGDCLVQENEWIRRVTCGCSNLDPSQDKGSCSLC-------DDIQS----FGTVEALYAAEAATTSRQILMGRRDKYMFHQANVVQQSGIP--------------GGSLLAYWYQEVMATLTNFI---AFPV 1257
            Y D +G   A V + ++ P  AA+  Y   DG EE+H+F S+AWFD GSWAWGHF  EWGTRG+FQ      GERRFYL G+VDDLFL+TG ++YD  +  G E R++ +D+  F + E++ N+ +G+ + TE  FNGLG+L+ V S     + ADADI LLPKG         G+ +I  P             LG       G F    LL            + H +                  G  R   +      DNYNWRS+TSPGITG FN  CL S   NLM C PGDNT+ G   TDV LI+  +QFHS+TTT GTNG++G QIVPRFAT VY+NCVTG CL+ ENE IRR  CGC++L+P+  +G+CS C       +DI S     G +EAL+  E  TT+R IL GRRDKYMFHQANV+  +                   SLL YWY  V+A +  FI   +FP+
Sbjct:  774 YADENGDVIAGVLAGVTNPESAAIVEYIGTDGLEEMHVFVSLAWFDTGSWAWGHFISEWGTRGIFQ------GERRFYLGGVVDDLFLSTGVWIYDPPSFFGPEERLSGADLQKFQNSEAAFNTAYGASVKTEHAFNGLGVLDKVGSTRRSWVGADADIGLLPKGDPPNPST--GIPQISDPNWLSTQFNPADGELGMQDDYDAGLFDSDDLLARVQADLDAFFWQSHTMTHLARDNLGKNDCDIEDGGNVRMAIMFGMFDNDNYNWRSMTSPGITGLFNPNCLQSGDENLMKCYPGDNTYSGPPLTDVFLINENNQFHSLTTTVGTNGYAGMQIVPRFATNVYYNCVTGQCLIDENEKIRRDVCGCTDLNPANPQGTCSACPSGTQSFNDIASSDPSIGPLEALFQTEERTTTRYILTGRRDKYMFHQANVISTTWTTDTSDPMYVSPRPTNNPSLLEYWYIRVLAEMARFINTGSFPI 1245
[Close]
BLAST of mRNA_L-elsbetiae_contig5210.13312.1 vs. uniprot
Match: D7FLJ1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLJ1_ECTSI)

HSP 1 Score: 324 bits (831), Expect = 5.560e-99
Identity = 198/445 (44.49%), Postives = 257/445 (57.75%), Query Frame = 1 
Query:   49 NVAAMAYTSDDGYEELHLFFSVAWFDLGSWAWGHFFVEWGTRGVFQASESRRGERRFYLAGMVDDLFLATGQFVYDGDTNEGA-EVRVTSSDMAAFASFESSLNSQF-GSDIVTEWPFNGLGILEVVDSA-----FVLDIADADIALLPKGQQVGGDAPPGLARIRRPRHDGRVQQRRLGSG-WPP*---LGA-----------FQPWHLLV-------AEPHPLPPGQGRPRRIGLHHRGRRDNYNWRSLTSPGITGHFNKFCLASAAANLMTCAPGDNTFDGVQTDVS-LISSVSQFHSITTTEGTNGFSGFQIVPRFATFVYFNCVTGDCLVQENEWIRRVTCGCSNLDPSQDKGSC-SLCD---------DIQSFGTVEALYAAEAATTSRQILMGRRDKYMFHQANVVQQSGIPGG--SLLAYWYQEVMATLTNFIAFPV 1257
            N A ++YT  DG+EELH+F ++ WFD G+W W HF+ EW T+G+F       GERRFYLA +VDDLFL+T +F YDG  NE A   R T  D+    S + SLN+ + GSDI+TE+ FNG GI E V  A     +V D  +  +    KG Q   D    +        +  + Q+ +  G W      L A           +   H L+        E   +    G  +   +      DNYNWRS+ SPGITG FN+ CL SAA NLM C PGDNTFDG  +  + L++  +QFHSI +T   NG+ G QIVPRFAT+VYFNCVTG CLV ENE+IRR  CGC+ LDPS    +C S  D         DIQSFG +EAL+ AEA+TT+R +L GRRDKYMFHQAN++    +  G  SLL YWY+ V+   ++++ FPV
Sbjct:  293 NAAMLSYTGADGHEELHVFNTIGWFDAGAWPWAHFYNEWATKGIFM------GERRFYLAAVVDDLFLSTPEFEYDGVLNEAALSQRCTGEDLTNLLSVQQSLNALYAGSDIITEFAFNGGGIAEHVSQAVENITYVPDYEETMVTT--KGTQWYEDGQINVHDTNWLATNVPLMQQDMADGTWEANDELLVAVISYLDTSSTFYHGHHTLIHLSRDQLRETDCVTEDSGNVQIALMTGMWDSDNYNWRSMVSPGITGLFNENCLDSAAQNLMVCYPGDNTFDGTVSGATILVNEDNQFHSIYSTVADNGYDGIQIVPRFATYVYFNCVTGSCLVNENEYIRRFVCGCTPLDPSIADYTCTSTADECVDDDGAPDIQSFGDIEALFDAEASTTTRYMLTGRRDKYMFHQANIIPAGDVGDGTQSLLDYWYERVLEVFSSYVTFPV 729
[Close]
BLAST of mRNA_L-elsbetiae_contig5210.13312.1 vs. uniprot
Match: D7FLJ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLJ3_ECTSI)

HSP 1 Score: 327 bits (839), Expect = 5.650e-99
Identity = 196/442 (44.34%), Postives = 262/442 (59.28%), Query Frame = 1 
Query:    1 YVDGSGANVPSSLSFP--NVAAMAYTSDDGYEELHLFFSVAWFDLGSWAWGHFFVEWGTRGVFQASESRRGERRFYLAGMVDDLFLATGQFVYDGDTNEGA-EVRVTSSDMAAFASFESSLNSQF-GSDIVTEWPFNGLGILEVVDSA-----FVLDIADADIALLPKGQQVGGDAPPGLARIRRPRHDGRVQQRRLGSG-WPP*LGAFQPWHLLVAEPHPLPPGQGRPRRIGLHHRGRRDNYNWRSLTSPGITGHFNKFCLASAAANLMTCAPGDNTFDGVQTDVS-LISSVSQFHSITTTEGTNGFSGFQIVPRFATFVYFNCVTGDCLVQENEWIRRVTCGCSNLDPSQDKGSC-SLCD---------DIQSFGTVEALYAAEAATTSRQILMGRRDKYMFHQANVVQQSGIPGGS--LLAYWYQEVMATLTNFIAFPV 1257
            YVD +G    S  +    N A ++YT  DG+EELH+F ++ WFD G+W W HF+ EW T+G+F       GERRFYL  +VDDLFL+T +F YDG  NE A   R T  D++   S + +LN+Q+ GS+I+TE+ FNG GI E V  +     +V +  +  + L  KG +   D    +        +  + Q+ +  G W     A     + + E   +    G  +   +      DNYNWRS+ SPGITG FN+ CL SAA NLM C PGDNTFDG  +  + L++  +QFHSI TT   NG+ G QIVPRFATFVYFNCV+G CLV ENE+IRR  C C+ LDPS    +C S  D         DIQS G++EAL+ AEA+TT+R +L GRRDKYMFHQAN++    +  GS  LL YWY+ V+   +++I FPV
Sbjct:  453 YVDSAGEPYLSGAAGDQENAAVLSYTGADGHEELHVFNTIGWFDAGAWPWAHFYNEWATKGIFM------GERRFYLGAVVDDLFLSTPEFEYDGGMNEAAVSQRCTGDDLSQLLSVQQALNTQYSGSEIITEFAFNGGGIAEHVSQSVEGITYVPNYEETMVTL--KGTKWFEDGQINVHDTNWLATNVPLMQQDMADGTWE----ANDDLLVELRETDCVTEDTGNVQIALMTGMWDSDNYNWRSMVSPGITGLFNENCLDSAAQNLMVCYPGDNTFDGTVSGAAILVNEDNQFHSIYTTTSNNGYDGAQIVPRFATFVYFNCVSGSCLVNENEYIRRFVCECTPLDPSIADYTCTSTADECVDDDGATDIQSLGSIEALFDAEASTTTRYMLTGRRDKYMFHQANIIPAGDVGDGSQSLLDYWYERVLEVFSSYITFPV 882
[Close]
BLAST of mRNA_L-elsbetiae_contig5210.13312.1 vs. uniprot
Match: A0A6H5JPQ4_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPQ4_9PHAE)

HSP 1 Score: 324 bits (831), Expect = 1.200e-97
Identity = 199/463 (42.98%), Postives = 265/463 (57.24%), Query Frame = 1 
Query:    1 YVDGSGANVPSSLSFP--NVAAMAYTSDDGYEELHLFFSVAWFDLGSWAWGHFFVEWGTRGVFQASESRRGERRFYLAGMVDDLFLATGQFVYDGDTNEGAEV-RVTSSDMAAFASFESSLNSQF-GSDIVTEWPFNGLGILEVVDSA-----FVLDIADADIALLPKGQQVGGDAPPGLARIRRPRHDGRVQQRRLGSG-WPP*---LGA-----------FQPWHLLV-------AEPHPLPPGQGRPRRIGLHHRGRRDNYNWRSLTSPGITGHFNKFCLASAAANLMTCAPGDNTFDGVQTDVS-LISSVSQFHSITTTEGTNGFSGFQIVPRFATFVYFNCVTGDCLVQENEWIRRVTCGCSNLDPSQDKGSCSL----------CDDIQSFGTVEALYAAEAATTSRQILMGRRDKYMFHQANVVQQSGIPGG--SLLAYWYQEVMATLTNFIAFPV 1257
            YVD +G    S  +    N A ++YT  DG+EELH+F ++ WFD G+W W HF+ EW T+G+F       GERRFYLA +VDDLFL+T +F Y+G+ NE A   R T  D++   S + +LN+Q+ GSDI+TE+ FNG GI E V  +     +V +  +  +    KG +   D    +        +  + Q+ +  G W      L A           +   H L+        E   +    G  +   +      DNYNWRS+ SPGITG FN+ CL SAA NLM C PGDNTFDG  +  + L++  +QFHSI TT   NG+ G QIVPRFAT+VYFNCVTGDCLV+ENE+IRR  C C+ LDPS     CS             DIQSFG +EAL+ AEA TT+R +L GRRDKYMFHQAN++    +  G  SLL YWY+ V+   ++++ FPV
Sbjct:  455 YVDSAGDPYLSGFAGDQENAAVLSYTGADGHEELHVFNTIGWFDAGAWPWAHFYNEWATKGIFM------GERRFYLAAVVDDLFLSTPEFEYNGEMNEAAVAQRCTGEDLSNLLSVQQALNTQYSGSDIITEFAFNGGGIAEHVSQSVDGITYVPEYEETMVTT--KGTKWYEDGQINVHDTNWLATNVPLMQQDMADGTWEANDELLAAVISYLDTASTFYHGHHTLIHLSRDQLRESDCVTEDTGNVQIALMTGMWDSDNYNWRSMVSPGITGLFNENCLDSAAQNLMVCYPGDNTFDGTVSGAAILVNEDNQFHSIYTTVADNGYDGVQIVPRFATYVYFNCVTGDCLVKENEYIRRFVCECTPLDPSIADFMCSSTADECLDSDGATDIQSFGDIEALFDAEAFTTTRYMLTGRRDKYMFHQANIIPAGDVGDGTQSLLDYWYERVLEVFSSYVTFPV 909
[Close]
BLAST of mRNA_L-elsbetiae_contig5210.13312.1 vs. uniprot
Match: D7G022_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G022_ECTSI)

HSP 1 Score: 327 bits (838), Expect = 3.730e-97
Identity = 206/482 (42.74%), Postives = 273/482 (56.64%), Query Frame = 1 
Query:    1 YVDGSG---ANVPSSLSFPNVAAMA-YTSDDGYEELHLFFSVAWFDLGSWAWGHFFVEWGTRGVFQASESRRGERRFYLAGMVDDLFLATGQFVYDGDTNEGAEVRVTSSDMAAFASFESSLNSQFGSDIVTEWPFNGLGILEVVDSAFVLDI-ADADIALLPKGQQVGGDAPPGLARIRRP-----RHDGRVQQRRLGSGWPP*LGAFQPWHLLVA----------EPHPLPP-------------GQGRPRRIG-LHHRGRRDNYNWRSLTSPGITGHFNKFCLASAAANLMTCAPGDNTFDGVQ-TDVSLISSVSQFHSITTTEGTNGFSGFQIVPRFATFVYFNCVTGDCLVQENEWIRRVTCGCSNLDPSQDKGSCSLCDD-IQSF----------GTVEALYAAEAATTSRQILMGRRDKYMFHQANVVQQSGIPGGS--------------LLAYWYQEVMATLTNFI---AFPV 1257
            Y D +G     V + ++ P  AA+  Y   DG EE+H+F S+AWFD GSWAWGHF  EWGTRG+FQ      GERRFYL G+VDDLFL+TG ++YD  +  G E R++ +D+  F + E++ N+++G+ + TE  FNGLG+L+ V S     + A AD+ LLPKG         G+ +I  P     + +    ++ +   +    G F    LL            + H L                 G   R+G +      DNYNWRS+TSPGITG FN  CL S   NLM C PGDNT+ G   T VSLI+  +QFHS+TTT GTNG++G QIVPRFAT VY+NCVTG CL+ ENE IRR  CGC++L+P+  +G+CS C    QSF          G +EAL+  E  TT+R IL GRRDKYMFHQANV+  +     S              LL YWY  V+A ++ +I   +FP+
Sbjct:  761 YADDNGDAIGGVLAGVTNPQSAAIVEYIGADGLEEMHVFISLAWFDTGSWAWGHFISEWGTRGIFQ------GERRFYLGGVVDDLFLSTGVWIYDPPSFFGPEERLSGADLQKFQNSEAAFNTEYGASVKTEHAFNGLGVLDKVGSTRRSWVGAAADMGLLPKGDPPNPST--GIPQISDPNWLSIQFNPAAGEQGMQDDYD--AGLFSSDDLLARVQADLDAFFWQSHTLTHLSRDNLGKNDCDIEDGGNVRLGVMFGMFDNDNYNWRSMTSPGITGLFNPNCLQSGDENLMKCYPGDNTYSGAPLTAVSLINENNQFHSMTTTVGTNGYAGMQIVPRFATNVYYNCVTGQCLIDENEKIRRDVCGCADLNPANPQGTCSACPSGTQSFNDVASSDPSIGPLEALFQTEERTTTRYILTGRRDKYMFHQANVISTTWTTDTSDPMYVSPRPTNDPSLLEYWYIRVLAEMSKYINTGSFPI 1232
[Close]
BLAST of mRNA_L-elsbetiae_contig5210.13312.1 vs. uniprot
Match: D7FLI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLI8_ECTSI)

HSP 1 Score: 291 bits (745), Expect = 3.740e-85
Identity = 186/429 (43.36%), Postives = 242/429 (56.41%), Query Frame = 1 
Query:   49 NVAAMAYTSDDGYEELHLFFSVAWFDLGSWAWGHFFVEWGTRGVFQASESRRGERRFYLAGMVDDLFLATGQFVYDGDTNEGAEV-RVTSSDMAAFASFESSLNSQF-GSDIVTEWPFNGLGILEVVDSA-----FVLDIADADIALLPKGQQVGGDAPPGLARIRRPRHDGRVQQRRLGSGWPP*LGAFQPWH----LLVAEPHPLPPGQGRPRRIGLHHRGRRDNYNWRSLTSPGITGHFNKFCLA--SAAANLMTCAPGDNTFDGVQTDVS-LISSVSQFHSITTTEGTNGFSGFQIVPRFATFVYFNCVTGDCLVQENEWIRRVTCGCSNLDPSQDKGSC-SLCD---------DIQSFGTVEALYAAEAATTSRQILMGRRDKYMFHQANVVQQSGIPGG--SLLAYWYQEVMATLTNFIAFPV 1257
            N A ++YT  DG+EELH+F ++ WFD G+W W HF+ EW T+G+F       GERRFYLA +VDDLFL+T +F YDGD NE A   R T  D+    S + +LN+Q+ GSDI+TE+ FNG GI E V  A     +V D  +  + +  KG +   D    +        +  + Q+ +  G          W     LLVA    L      P  I   H          +L            C+A  +AA NLM C PGDNTFDG  +  + L++  +QFHSI +T   NG+ G QIVPRFAT+VYFNCVTG CLV ENE+IRR  C C+ LDPS    SC S  D         DIQSFG +EAL+ AEA+TT+R +L GRRDKYMFHQAN++    +  G  SLL YWY+ V+   +++I FPV
Sbjct:  576 NAAILSYTGADGHEELHVFNTIGWFDAGAWPWAHFYNEWATKGIFM------GERRFYLAAVVDDLFLSTPEFEYDGDMNEAAVAQRCTGEDLTNLLSVQQALNTQYSGSDIITEFAFNGGGIAEHVSQAVDGITYVPDYEETMVTI--KGTKWYEDGQINVHDTNWLATNVPLMQQDMADGT---------WEANDELLVAVISYL----DTPSTIYHGHH---------TLIHLSRDQLRETDCVADDTAAQNLMVCYPGDNTFDGTVSGATILVNEDNQFHSIYSTVANNGYDGIQIVPRFATYVYFNCVTGSCLVNENEYIRRFVCECTPLDPSIADYSCASTADECIGTDGATDIQSFGDIEALFDAEASTTTRYMLTGRRDKYMFHQANIIPAGDVGDGTQSLLDYWYERVLEVYSSYITFPV 974
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5210.13312.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LD68_ECTSI5.540e-24678.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K3S3_9PHAE4.030e-19665.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FLI7_ECTSI3.360e-10142.67WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5K730_9PHAE2.570e-10045.02Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G056_ECTSI1.300e-9943.75Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FLJ1_ECTSI5.560e-9944.49Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
D7FLJ3_ECTSI5.650e-9944.34Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JPQ4_9PHAE1.200e-9742.98WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G022_ECTSI3.730e-9742.74Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FLI8_ECTSI3.740e-8543.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5210contigL-elsbetiae_contig5210:105..11659 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score151.0
Seed ortholog evalue5.2e-34
Seed eggNOG ortholog2880.D7G056
Hectar predicted targeting categoryother localisation
EggNOG OGs28IRF@1,2QR2R@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons10
Model size1275
Cds size525
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5210.13312.1prot_L-elsbetiae_contig5210.13312.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5210 165..5529 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816535.0423625-UTR-L-elsbetiae_contig5210:104..1641622816535.0423625-UTR-L-elsbetiae_contig5210:104..164Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5210 105..164 +
1691683629.7406077-UTR-L-elsbetiae_contig5210:104..1641691683629.7406077-UTR-L-elsbetiae_contig5210:104..164Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5210 105..164 +
1622816535.1128798-UTR-L-elsbetiae_contig5210:5529..56331622816535.1128798-UTR-L-elsbetiae_contig5210:5529..5633Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5210 5530..5633 +
1691683629.7999208-UTR-L-elsbetiae_contig5210:5529..56331691683629.7999208-UTR-L-elsbetiae_contig5210:5529..5633Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5210 5530..5633 +
1622816535.1244862-UTR-L-elsbetiae_contig5210:6690..68871622816535.1244862-UTR-L-elsbetiae_contig5210:6690..6887Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5210 6691..6887 +
1691683629.807693-UTR-L-elsbetiae_contig5210:6690..68871691683629.807693-UTR-L-elsbetiae_contig5210:6690..6887Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5210 6691..6887 +
1622816535.1365194-UTR-L-elsbetiae_contig5210:7930..79981622816535.1365194-UTR-L-elsbetiae_contig5210:7930..7998Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5210 7931..7998 +
1691683629.8163154-UTR-L-elsbetiae_contig5210:7930..79981691683629.8163154-UTR-L-elsbetiae_contig5210:7930..7998Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5210 7931..7998 +
1622816535.1494572-UTR-L-elsbetiae_contig5210:8686..87641622816535.1494572-UTR-L-elsbetiae_contig5210:8686..8764Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5210 8687..8764 +
1691683629.825403-UTR-L-elsbetiae_contig5210:8686..87641691683629.825403-UTR-L-elsbetiae_contig5210:8686..8764Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5210 8687..8764 +
1622816535.160183-UTR-L-elsbetiae_contig5210:9665..97661622816535.160183-UTR-L-elsbetiae_contig5210:9665..9766Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5210 9666..9766 +
1691683629.8345513-UTR-L-elsbetiae_contig5210:9665..97661691683629.8345513-UTR-L-elsbetiae_contig5210:9665..9766Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5210 9666..9766 +
1622816535.1884475-UTR-L-elsbetiae_contig5210:11517..116591622816535.1884475-UTR-L-elsbetiae_contig5210:11517..11659Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5210 11518..11659 +
1691683629.8441586-UTR-L-elsbetiae_contig5210:11517..116591691683629.8441586-UTR-L-elsbetiae_contig5210:11517..11659Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5210 11518..11659 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816535.053154-CDS-L-elsbetiae_contig5210:164..3081622816535.053154-CDS-L-elsbetiae_contig5210:164..308Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5210 165..308 +
1691683629.755774-CDS-L-elsbetiae_contig5210:164..3081691683629.755774-CDS-L-elsbetiae_contig5210:164..308Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5210 165..308 +
1622816535.0651321-CDS-L-elsbetiae_contig5210:1398..14941622816535.0651321-CDS-L-elsbetiae_contig5210:1398..1494Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5210 1399..1494 +
1691683629.7641609-CDS-L-elsbetiae_contig5210:1398..14941691683629.7641609-CDS-L-elsbetiae_contig5210:1398..1494Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5210 1399..1494 +
1622816535.0767925-CDS-L-elsbetiae_contig5210:2399..25191622816535.0767925-CDS-L-elsbetiae_contig5210:2399..2519Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5210 2400..2519 +
1691683629.7724545-CDS-L-elsbetiae_contig5210:2399..25191691683629.7724545-CDS-L-elsbetiae_contig5210:2399..2519Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5210 2400..2519 +
1622816535.0891185-CDS-L-elsbetiae_contig5210:3521..36001622816535.0891185-CDS-L-elsbetiae_contig5210:3521..3600Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5210 3522..3600 +
1691683629.780701-CDS-L-elsbetiae_contig5210:3521..36001691683629.780701-CDS-L-elsbetiae_contig5210:3521..3600Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5210 3522..3600 +
1622816535.1010146-CDS-L-elsbetiae_contig5210:5443..55291622816535.1010146-CDS-L-elsbetiae_contig5210:5443..5529Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5210 5444..5529 +
1691683629.7888932-CDS-L-elsbetiae_contig5210:5443..55291691683629.7888932-CDS-L-elsbetiae_contig5210:5443..5529Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5210 5444..5529 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5210.13312.1

>prot_L-elsbetiae_contig5210.13312.1 ID=prot_L-elsbetiae_contig5210.13312.1|Name=mRNA_L-elsbetiae_contig5210.13312.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=175bp
MAYTSDDGYEELHLFFSVAWFDLGSWAWGHFFVEWGTRGVFQASESRRGE
RRFYLAGMVDDLFLATGQFVYDGDTNEGAEVRVTSSDMAAFASFESSLNS
QFGSDIVTEWPFNGLGILEVVDSAFVLDIADADIALLPKGQQVGGDAPPG
LARIRRPRHDGRVQQRRLGSGWPP*
back to top

mRNA from alignment at L-elsbetiae_contig5210:105..11659+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5210.13312.1 ID=mRNA_L-elsbetiae_contig5210.13312.1|Name=mRNA_L-elsbetiae_contig5210.13312.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=11555bp|location=Sequence derived from alignment at L-elsbetiae_contig5210:105..11659+ (Laminarionema elsbetiae ELsaHSoW15)
TACGTGGATGGCAGCGGCGCGAACGTCCCGAGCAGCCTGTCGTTCCCGAA
CGTGGCGGCCATGGCTTACACCAGCGACGACGGCTACGAGGAGCTGCACC
TGTTCTTCTCCGTGGCGTGGTTCGACCTCGGCTCCTGGGCCTGGGGGCAC
TTCTTCGTGGAGTGGGGAACGCGGGGGGTTTTCCAGGCGAGTGAAAGCAG
GCGTGTTTTGGATGGTTGTTGTTGGGGCTTTTGGTGGTGAGGGTGTTGAT
GTTGGTGGTGATGTTGTTGCAATGAAAACCGCCCCGACCTCTCTCCTCAG
GACCTTCATCCGTCCGTATCCCCGCGGCGGTCACAGAACGTAGATACAGT
AGGTTTAAGCTTACCTAACAATAAAGAAAGGTAAAACTCTATCTAAACAA
GATGGACCCAACATCTTTTGTCCACACAAAGCGATGTAAAACCAAAAAAG
TGCGGCGACTACATTTTGGTGGAACAACGATTGATCCAAAATATACCGCG
CGGGAGAGAAGATAGCCCGGGCGGTGTGTCGAAGATATTTCTTCGGTATT
TCTTGGCGCGGGACGACTGTGGAGACATGGCGGAGAGATTTATTTGAACT
CTTTTTCCAGGCGAAGGAGAATTATTGTGTTGGAGTGCATGGTGTCGTGC
ACGGATATTCTGAGGTTTTTCGGTATAAGGCCGCCGTTTTTTGTATTTCG
TAGTTGTCTCGTGGGTCCCATAACCTTGGCTCTCGATCCTGTTTCCTGTG
TTGCTGATGACTCAATACTCAATACCCCAGGGAGAAAAAAGGTACACACC
CGGTTTCGCTTTTAGTCTTGGATTCATTAAGGTACACCCCGGTTTTCGTT
TTATTTAATCTTGGATTCATTAAGGTACTCCTGGTTTCGTTTCAATGTTG
TCGTTGTTGTTGTAGTTGTTGTTGTTGCTGTTGTTGTTGTTTCTTCACAT
TCAAAACCGTTCCGATCTCTCCACCCAGTACCTCCCTATGCCCGTACAAT
CGAACACTTGATGCAGTCAATTCCCGTGGCCCAGGATAATAACTGGTACC
TGAAAGTCTTGGGTTCCACAATCAATCGTGATTTTATGTTGTCTTTTTTG
CCGACGTACTACTACCGTATATACCAAGGTAACAAACGACCTTGATTCGT
CCTATTTTCTGATGATTCACAAACAAACGGACGACCTTGATTTGATGTTA
TTTTCGGACGACTCAGCATTTACCGTATTACCTTGATTCGATCGCGTTTT
CTGAGAACTAAAACAATTCTGCCTGCTGCCTACACTTCCACCAGGGCGAG
CGGCGGTTCTACCTTGCGGGGATGGTCGACGACCTGTTCCTAGCCACCGG
CCAGTTCGTGTACGACGGCGACACCAACGAGGGCGCGGAGGTAAAACAAG
ACACACCCGCGGAGCCCCCACATATATCTCACCCGGGGAACTCGTTGCTT
TATTTTTCGGCGGTGCCCCCTCCCTTCCTCCGTTTTTGTTTTTATTGTCC
CGACTGCAGACAAGCTCATCTGATGCAGATACACCTGTGTTCAGGATTTG
CGCCTACGTATATATGTACATACTACTTCGAAGTATGTGATTTACGCGCT
GCACATCGTTAATAAGCATTCGGGGACTCCAGCAGCGGGGAAGATAGTTT
GCGGCTCCCTTCTGTAAATCCCCTTCTGTAAATGCCCTGACCTGGGGCAT
TTTCAAGGCTGAAGTGTTGAATACCTGGTAGTTTTTGGCGGCGGATATCC
CGAAGAAGAGGTACTTGTTTACTAATTTTCTCTCTAAATATGACAACGTG
TCGTGGCTTCGTCAAGTCGCCAAAAGAGGACCGCTCTTCTCTCGCATTGT
AGATAGATATTTAGCAACCCTTTCTAAGATGTGGGTTCGTTCGCGGATCC
GCCAGTGAAACCGGCGGACGGAGTGAAACTGGCGGGGGTAATGCGTTCTA
TCGTGTGTTTTTTTCGTGCGGGACCAGGCCGGTTCCAAGGTCGTCCACCT
CGTATTCGAGCCTAGCTTCATACATACATAGGTATCTATTTAACCACCAA
TAGTAATTAATCTTAATCTTCTGCAGGTTGGCTTTAATTTGTGCCTTTTG
CTGTTTTTTTGCTCCATTTGTTTTTGAAAAAGTATTCAGGAAAAAATCAA
AGAAAATATCCCCCCCACCCCCCCACAAGAGACGGGACTGACGACTTCCG
TGGTGAATTCATTATCAATTCACAATTCAAAGAGGCAACAGCAGCAGAAT
GTAAATGGGGATGTAATGTTAATATTATTGTGTTCGTTTTTTCAGGTCCG
GGTGACGTCCAGCGACATGGCAGCGTTCGCATCCTTCGAGAGCAGCCTCA
ACAGCCAGTTCGGCTCCGACATCGTCACCGAGTGGCCTTTCAACGGTCTC
GGCATCCTCGAGGTGGTGAGTAAACCCCCTTACACACACAATTCACGGGG
CCCCTGAGGGAGATTCACGGGACCCCTTCTGACCTTGCCTGCGTGTTGTG
TATGGATTTGAGTTAGCGCGAGATGAGCTCCTCAGCAGGCAGAAATGAGA
ATCATCCTCTGGTGCAGGGTTATTCATGCCTGGCCTCTGCATCCTTCAGG
TAGTGAGTGCGGGTGAACCGGACCGGACCGCCTTCATTCCGTAACCCTAA
ATAAGTGACCCCAACCCTGCATAGCCAACCCCAGACCGCCCCCCGGCTTA
GCCGTCACCTACTTTTGAAAGGAAAAACAGTTGATTGATTGATAAAAAAT
GGAACCTAACCCACATGTATTTATGCATGTATGTATGCATGTATGTATGC
ATGTATGTATGCATGTATTTTGTCTTCACGTTATAAACCGTTCCGATCTC
TCCATCCAGTACCTCTGAATGTCCGTACTAATCCAACACTTGATGCGGTC
AATTCCCGCGGTCACAGGCTAACTTATACCCAAGAGAAGGTACACGAAAC
ATAAAATGGACCCGAAGGGCCAGCAAAGCAACAATAAATAACAGATATCG
AATATATACTTTGTTTTATCCCGTGCGTTAGCTCTTACGCTCGTCCCATG
GATGTAAATGATGGGGCGGCCGTTAAGCCATCCGCGTATTCTCGGTGCAA
AAGTCGATCTTGTTCATATCCGACGCTAGAAGAAAGCGAGTACCGGAACG
GAGTACGCCGGAGTGATACATATCTAGAAGTTTGTTGCTGTGTAGCTCGG
TTTGCGCCTTTTCTATTTATCTGAGTTTTAATTTTTACGATCTTGTATGT
ACCGCGGACCGGACTTACTTGACGTGCGAGCAGTTTCTTTTTCCTAAAAC
AGTACTTCTAAGTATTATGCACCGTCGTACATAGATAGGGATGTGCGTTT
TCAAGCTTTTACATGTTTGCCTTTCTGCCCTTCTCTTTTATTGTTATTAC
CTTGCCGTGTTCGTCAGGTGGACTCCGCGTTCGTCCTCGACATCGCCGAC
GCTGACATCGCGCTGCTCCCCAAGGGACAGCAGGTCGGCGGCGACGGTGA
GTGATGATCAGTATGCACAACCCAACCAAGTAAATATTTAGAACCACATG
GCTCCCTTAAGGGAGCCTTTCCTTTCGCTTCCGTGATCCACTAACCCTAG
AAGTAAGTATGCCATGATGGTGCTTATTTTCCGTCCACAAGATCGCCCCG
GTGGTCCAGTTGGGTGCCCCCGAACACCTTCGAGCAGGCAGGTCGTGAGT
TTCAAATCTCAGCCGAAGCGACTTTTCCTTGCGAAACGATCTTTTATTTC
GCTTCCGTCCCTGTCGTCCGTCAGTGGATAACGCTTACGTATGAAGTAGC
GTGCGTACACACACTTCGATCTCGCCGTCGACGAGGGAAAGAGACACGAC
TGAACCCTTTTCGCGACACAAATCTCACATAGGCAAGCACCGCAGAGAGG
GGGGGGGGGGGGGGGGGTCCGGGAAAGGAACCACCACGGTTCAGTATTAC
TCTGCCTACTTGCCATGTTGCCGCTCGCCTCTTTGGCCGGCCTTTGGTCC
CCTGCTATTTTGCTATCTTGGTATTTGGCTCCCGGGCCTCTCCCTCCCGG
CCTTTTTCCTGCCTTTTTCTGGTCGTGTGGGAAGCCTCTTCGGCAGTCTG
TAGCTCTCTTCCCTCCCCTGGCGCCCTGGCGTGGTATTTGGTGGTTGGTT
CGCTTTTTCGAGCTTTCTTGCGTTTTATCTTCCGAGTAGTATAATGTCCT
CTATCTTTTGATTTTTGTGCTGGCGAGACGCAAGACCCCCCCGGGGTCCA
GTTTAGTACCGCCGGGCGCGGATGTACCACACTGTTGTTGTTTTTTTCCC
GCGGCGTCGAGTGTGCCTTGTTTCGTGACCACGGGCCCCCAAGGATGTTT
TGGACTTGAGAGCTAATAATGTGACAACAACAAACAACAACAGCTCTGGC
AAGATACCTTCTTCGTGGCAAGGAGCCCATCGAGCACCAGAAATAACAGC
GAAGAATATAAAAAATAATTGAAAGACAGTGAATAATTAGCGGGGGTTCA
TCTGCTGCATATATGCAGTATACGACACAAGATAGCACACCCCCTGGGCC
GGTTTTCAAAGCTTGGTTCCTCCGCAACGAGTATAGTTCTATTTCCAAGC
GACACGTTTTCGGACAGCTCTTGATGGGGATCTTTCCAACACCGCCGTCC
TTTTCGGGACTCACGCTTTTCTCGCTGTGGACCCGTACTTGAGCTCTGAG
AATCGGTCCAGGGGGTGTGTTATCCTGCGCCGTATATCTATGGTGGGTAC
CAGTCCCCTAGGTATTTAATGCGTCTGTCTGCGAAGGTTGGAGAAAGGGT
GTGTGCGCACTATGTATCTGCCTGCACACGCACACGTTTTTGTGCGGGAC
GCACACGTTTTTTGTGCGGGCGTCTCCTGGCAAATCGACTTTCCCACAGG
CTGGGTGGGCTGCGGGCTTAAAAGTGCGTACAAAAAGACGGCCGCCGGCA
TTTAATCGAGAAAAAGCAGAAACATTTTCTCAGGGTATTTTACAAGAGTG
ATGTATTTACGTAGATTATGTAGATTTTGATATCTGCTGCTTCTGTTGTA
TTTATTTTATCCCCCCAAGTTGGTACAATGTGGTGCTATATAGACTACAT
CGTCTACTCCGAAACGTGTACGGTAGGTAGTGTAGTAGCACATGAAAAGA
AGGAGTGCAGCCGCCAGAATAAATGGGACGAGAAACATACATACACACAC
ACACACACACACACACACAATATTGGTGATGGAGTGTACGCAAGGTGTAC
GTACATATGCGCCCCGTGGATTGAATCCCTAAAAAGTATGTCTATACCTA
CCTACCGTCGACGAACGGCGCCCAGGTGTCACGCCCCAGCTCCCCCTGGG
CTGGCTCGCATCCGCCGTCCCCGGCATGACGGCCGAGTTCAACAGCGGCG
CCTGGGGAGCGGATGGCCTCCTTAGCTGGGTGCTTTCCAACCTTGGCACC
TTCTGGTGGCAGAGCCACACCCTCTCCCACCTGGCCAGGGACGACCTCGG
AGAATCGGACTGCACCATCGAGGACGGCGGTGAGTGTTACATTTTTATTT
TTGTATGTAGATATGTATATCTACCTTGTCTTTTCCTTTTCTGGTGTAAG
ACTTAATACTGGGGTATTAAATAAGAGCTTTTGCAATTACTTTGTTTATT
TTTTAATCACTATTTTCTGGGACACCTAACTACCTAGATATATCTATATA
TGTACCTACCTCAGATGATATTCAGTATGAGCTTATTCTGCAATTAACTT
TTAGTTCAATGGTGTGTGTTTGTTTCATTGCTTAATTATTAGTTTGTGGA
ACACTTTTAGTGCAGAAGCTGGTTGCTCTCTACTTGGTGGTTTTTGTCGT
GCCACTGGTGGTATGTGCGTACGACCGGCTCGCCCTGGTGGGCTAATTCA
GCGAGTTCCACCGTTGATCGGCTGGTGTCAAGGTCTGGGGTTTCGATGCC
CTGTGGGGTTGGTTCTGTTTGCGACTTTTGCAGAAAGGTCACCCACAGAA
ACTCACAAAATAAGAAAACAAGCCTAGTATGCATATATATACGGACCGCG
GTTTTTTGTGCCTGTAACCTAGGACGGTGCGGGGAGGGCAGGCACGCCTC
TCTACACAACAGACCCACGCTCAAGAATCCTATGATAGTACGACTTGCGG
ATTTTGTGCCGCCTGCATTTATTTAGCTTGGGATGGTGAGGGAGAGCTGG
TTCTTTCTTTTGCCCACGAGAAGAGTAGTCCGTGCCCCCGCTGGAAAGAC
GTTTTTTTGTCACTGGTCGGGCGTACAAGGCTGGCGCTGACATTTAAGGT
GGAACATTTGTACTCCATGTATGTACCTCGAAGTGTGTAAAAAAGAAAAA
CGAAATGCTTCGAGAGTTTTTTTTTCTTGTTTTCACAAATCAAATATTAC
GTCTCTGTATGGAATACCGTTTGAACCCCATATCGAGTCTTTGCTCTACT
AAATAGTATGGGTTAGGTTCCATCTTTGATTCTTTGTTTCATTTAAAAAA
ATTAAAAAACACCCAACCAACCAACTGACCGCCCCCCATCCCGCAGGCAA
CGCGCAGATCGCCGTGCTCACGGGCCTCTTCGCCAGCGACAACTACAACT
GGCGCAGCCTCACCTCCCCCGGGATCACGGGGCACTTCAACAAGTTCTGC
CTCGCCTCCGCCGCGGCCAACCTCATGACCTGCGCGCCCGGGGACAACAC
CTTCGACGGCGTGCAGACGGACGTGAGCCTCATCTCCAGCGTGAGCCAGT
TCCACTCCATCACCACCACGGAGGGGACCAACGGTGGGTGATGTGATGGG
GAGAAGAAGAAGAGCGATGATGCCTTTGGACAGATTTGTAGCAGCGATAA
CACCCACCACCCTTGTTTAAATGGAAGCTCAATCTTTCACAAAAAATCTT
GACCTTTGAGCGAAAGATTTTATTTCGATATTTTTCAGTTGGATAATGTA
GTACATGTTTAGGAGCGATATGTCCTACATATCATAGTATATATACATAT
GTATGTATATATATGTCGGAAGTAATGCTGAGAGCGATACTAATCGATAG
GAGTACTGCTGCAGGAGAGCGATGTGTTGGAGGCAGCTGAGTTCAATATC
AGTTCATATTAGAATTTCTATATAAATATGTGGAGAATCGACGTTGAGCG
ATGATGTCATTGAATAGGAGCGATAAAATAATATACTTCGAAGTAGTGTT
TTTTGTATTAATTATTTTTTTTATTAATTAATTATGTAATTAATTGGTTT
TGGGCAGGTTAATTGTTTGTTTGGTTTGGGGCAGGCAATATATATAAACG
GCGCACGCATATAGTATAATTTCTCCATTTTGTCCGGGTCGCGAAATTGC
TGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGGTAGTGGCG
GTTGTGATGTGTGGCTGCGCTGTATTTGTTATTATTATTGTTATTATTAT
TATCATTATTTTCGTTCTTGCCTCCGACAATCGCAGAGAGAGCCAACGAA
CACATAACTCATCCCACACACGCGTACATATGTATATATATATCATAGTT
GATGTTAAATACAAAATACCTATGAGTACTATATCAATCGACATGATAAG
ATTTCGATATGCGACCATAAGCGCTCCTTTGCATTTCCAATGCTATCTTT
AATATTTATAAGTGTGTGTATTTCCCACCAAAAATGAATCTCTTTGTGTC
TGTCGTCTCCCGGTGGTTTTGGAAGTTTCTTCTCTGGTTTACGTGGGTGT
GTGCAGTTTTTGATGGGGTGTTGCTCTCTCTCATGCATGTATTCATATCC
CATGTTGTGTGCTATTGTCTGTCCAGGCTTCTCCGGGTTCCAGATCGTGC
CCCGCTTCGCGACCTTCGTGTACTTCAACTGCGTCACCGGCGATGTGAGC
GATGATGACATGATGGCGGCTGGCTGATGGCTGCTCGTTTTGCTTGGGAG
TCACGCCGCAAACAAACGCAGCGAGCGGCCGAAAATCCTGGTCTACGTTG
TTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTATT
GTTGCTGCTTCTGCCACTTTTTTTGTTGTTTTAGTTTTTGTTGATAAGTC
CCGTGTTGTTGTTGTCGTTCGTTGTCGTTGTTGGTATATACGCTGCTGCT
GCGGCTGCTGCTGCTGCGGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGC
TGCTGTGGTGTCTAGTTGATGTGATGCTGCCGCCCCCTACATGCTTCCTC
GTTCCTCACCGACAACCAAAGTACATAACACATGCACATAGATATGTGGC
TTAACGAGACCGAGCAAGGCACTGCACGTCGTGTACAATAGTCTTGAGTC
CCCACCCAGCGATTCGCTGAGCCCCATCACTGCGCCAGGCGACCAAACGG
GCCCGATGCTGGTTTCACTCTCTGCCAGCAGTACTGTCCGTGATGCCCCT
CTCATGTGTTTCCCTTTTCTTTACTTTTTCTTTTCTGTTTCTTTTCGTTC
TTGTGTTTGTTTTATTTTATTTTATTTCTTCCTTCCCGGTGCTTTTTTTG
TTTTTCCTGCAATATAAATAATAATAAACCAGTGCCTCGTGCAAGAGAAC
GAGTGGATCCGGCGCGTGACGTGCGGCTGCTCCAACCTGGACCCGTCGCA
GGACAAGGGGGTAAGTCTTGGCTACTATGTGTGTGGGAGTATTTGTTTTT
TATCTACTAGGTATGCAGTTCGAAACACTGCTGCAGGTTTAGCGCGCGTT
ACTGCTGTTGTTGTTGTTGCTGTTGTTGTTACTGCTGTTGCTGTTGTTGT
TGTTGGTGTTGGTGTTGTTTCTCACATGAGCTCTCTAGTCCACACACATC
CATAGGGGCCCCGTGGTCACAAAACACTCGAGGGGGCACACTCGACGCCG
CTTGCGGACGTCTGAAAATGGTTGTTAGATAGTAAGTTCCAAAGCGCGGC
AGAGAGGCAACAATATTTTTTTATCGTTTGGGGGAGACGTGTATACTTCA
TTTAACATGCCATCACCAGGTACGTCTGTAGGGCCGCACGATGAATGAAT
CCTCGTGGTTGTGTGTGCTCGGAATCCCGGTGTTAAGTAATACTTCGCGA
GGCTAAAAACAAAAAACTCTTCTTTTTTTCGGCGAGAAACGGCATGCACG
GTGCGCATAGATAAAGAGTCTAGATAGATAAATGGCGAGCGAATTTTGCT
TTTTCGCAAGGCTCAGGATGGATTGGCCGTGAGCCTGATAAAACACGAGA
CTTGGGGGCAACACGCATTGATTGTTATCATATGTGTGTGTACTCTCAAA
GGCAGCAAAGGGTAGTTGATCGGTGTATGTGTGTGGAGGTGTTTGGTTTG
GCGATGAGGGACAAGTGTGGCTGCTGGTTGTGAAAAAAAGGGGGTAGTCT
AGTCTGTGTGCGCACCGCACCGCTGCACAGATAAATAGGTGCACCACACC
TGAATGTTCTACGGTCTCCACCCCGTCGCCGCCGCTGCTGCCGCTGCTGC
CGCTGCTGCTGCTGCTGCTTCCGCTGCTGCTTCCGCTGCTGCTGTTTCGC
CGGCCCTGTAGTCTTGCTCCTTGTGCGACGACATCCAGTCCTTCGGGACG
GTGGAGGCCCTGTACGCCGCCGAGGCAGCCACGACGTCTCGACAGATTCT
CATGGGCCGCCGGTGAGGGGATGTCATATTGTGTCTTGGGTGTAACTACC
GTAGGTGGCTCAAGATACCACACCCCCTGGACCAAATTGTAGAGCTTCAT
TATTCCGTAACGAAGAAGGTGCAACCACCAAGCAACACATTTTCGGACAG
CCCTCGACTAGATCTTTCCAACGCCACCTCTCTCGGCACTGGCGCTCTTC
TTGCTGAGGAGGAATTGAGCTTTGAAAATCTGTCCAGGGGGTGTGGTATC
TTGTGTCACCTACGGTAAATAGGTCATTGCCTGCAGCCTACATCTTGCTA
TTGTTGTTGTTGGTGGTGGTGTTGTTTCTTCACATTAAAAACCGTTCCGA
TCTCTCCACCCAGTACCTCTCCCTGTGTCCACAATCAAACACTTGATGCG
GTCAATTCCCGTGGTCACAGGCTAACTTAGTCTATACCCTCCTACAAAAA
GGTATTTTTACGAAAATAAAATGGATCTGAAGGTGCGAAGGGTCAGCAGC
GATAAATATTAAAGTCAAATAGTGCGGAGCCCCCCGCTCCCCTCTAGACG
CTATACGAGGTACAATTTTTTGTTCACTGTTGTTGTTGCTTGCTATTGTT
GTTAATTGTTGTTGTTGTTGTTGTTGTTGTTGTTTTGTTGTTATCGTGTC
GTTGGTTGGGGGGGGGGATACCGTAATCATGGTTGTGGAGAAATACGCTA
TAGAAAAACGCTAACACGGGGGTGCGAACCTTCGCATGATTACGGTAGTA
TATAATGTGTGTCCATGGTTAACAATCAGAGCAGCTGGTTTCCGCTTTGA
TTAAGGGCTTCCTGCAGCAGACCCCCCTAATTCTGAAAAAAAGTCGTCTG
TGGAGGATTTTTTTCACCCTATTTATTTCCTGAACAAATGCCCCCCCCCC
GCTACCCCCCACTGCTCTTTCTGAGAATTGGGGGCCCTGTTGCAGGAATG
CTACATAGGGATCGTTCTTTCTTTCGCTCGTCGCCTGTGGTTGTGGTGGT
TTACTTTTAGAAAGCTGGGAGATGATGATTTTCTTTTTTTTTTAGGAGGT
TTTTTCGCGCGCGCAGCGCGCGAAAAATAAAATGTAGCGATCGATATGTT
TGTAGCGGAGTTTTATTTTTATTTGTTTTGATGGAACAGGAACTGCACCT
AACCGGTTCATGCACGCGGCTCTGGTCGCGCCGACTTTCTTTTCGCGCTG
CCGGTTTGCACGCACCCCCGGGGGCGCTTCCTCGCTCTCTTCCCTACCGC
GGGGACGCCGTCAAAGCGTTTTTTTCTGCTCTTTCTTAACTAGTGTGCGG
GGGAGTGAGAGTTTTACGTACATATCCAGCCAGATAGACACCTTTATCGC
CCCTGGACGGATGGATGACTTGTCCACCAATCACCCTTTATTTCATCATG
GTGGTGTGCGTGGGCACGTCGGCACCTCCCTCCCTCTCTCTCTCTCCCAC
TCCCCCCCCCAAAAAAAAAATCAAACCAGCCCCCCCACGCGCTTGTTGTC
GTTGTCGCTGTCGTTGTTGTTGCTGTTGTTATTTGTTGGTGATGTTGTTG
CTGTTGTTGTCTTCACATTAAAAATTAAAACCCGTTCTGATCTCTCTGCC
CACTTAAAACTGAAAATCTCCACCTCCCTAAATATCTCCGCACTAATAAT
CCCAACACTTGATCGTACCGCCGTTTTGTCAACGCTGTGGCCGTTCTCCT
CCGCGACACGCCCAATGGCATGACGTCATCATATCATATCACATCATATC
ATATCGTATGTAGGGACAAGTACATGTTCCACCAGGCCAACGTCGTCCAG
CAGTCCGGAATCCCCGGCGGGTCGCTGCTGGCGTACTGGTACCAGGAGGT
GATGGCCACGCTCACCAACTTCATCGCCTTCCCCGTCACGGTGAGAGATG
AGAGA
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig5210:105..11659+

>mRNA_L-elsbetiae_contig5210.13312.1 ID=mRNA_L-elsbetiae_contig5210.13312.1|Name=mRNA_L-elsbetiae_contig5210.13312.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1050bp|location=Sequence derived from alignment at L-elsbetiae_contig5210:105..11659+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCTTACACCAGCGACGACGGCTACGAGGAGCTGCACCTGTTCTTCTC
CGTGGCGTGGTTCGACCTCGGCTCCTGGGCCTGGGGGCACTTCTTCGTGG
AGTGGGGAACGCGGGGGGTTTTCCAGGCGAGTGAAAGCAGGCGTATGGCT
TACACCAGCGACGACGGCTACGAGGAGCTGCACCTGTTCTTCTCCGTGGC
GTGGTTCGACCTCGGCTCCTGGGCCTGGGGGCACTTCTTCGTGGAGTGGG
GAACGCGGGGGGTTTTCCAGGCGAGTGAAAGCAGGCGTGGCGAGCGGCGG
TTCTACCTTGCGGGGATGGTCGACGACCTGTTCCTAGCCACCGGCCAGTT
CGTGTACGACGGCGACACCAACGAGGGCGCGGAGGGCGAGCGGCGGTTCT
ACCTTGCGGGGATGGTCGACGACCTGTTCCTAGCCACCGGCCAGTTCGTG
TACGACGGCGACACCAACGAGGGCGCGGAGGTCCGGGTGACGTCCAGCGA
CATGGCAGCGTTCGCATCCTTCGAGAGCAGCCTCAACAGCCAGTTCGGCT
CCGACATCGTCACCGAGTGGCCTTTCAACGGTCTCGGCATCCTCGAGGTG
GTCCGGGTGACGTCCAGCGACATGGCAGCGTTCGCATCCTTCGAGAGCAG
CCTCAACAGCCAGTTCGGCTCCGACATCGTCACCGAGTGGCCTTTCAACG
GTCTCGGCATCCTCGAGGTGGTGGACTCCGCGTTCGTCCTCGACATCGCC
GACGCTGACATCGCGCTGCTCCCCAAGGGACAGCAGGTCGGCGGCGACGG
TGGACTCCGCGTTCGTCCTCGACATCGCCGACGCTGACATCGCGCTGCTC
CCCAAGGGACAGCAGGTCGGCGGCGACGCTCCCCCTGGGCTGGCTCGCAT
CCGCCGTCCCCGGCATGACGGCCGAGTTCAACAGCGGCGCCTGGGGAGCG
GATGGCCTCCTTAGCTCCCCCTGGGCTGGCTCGCATCCGCCGTCCCCGGC
ATGACGGCCGAGTTCAACAGCGGCGCCTGGGGAGCGGATGGCCTCCTTAG
back to top