Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | other localisation |
Exons | 1 |
Model size | 439 |
Cds size | 363 |
Stop | 0 |
Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816530.720619-UTR-L-elsbetiae_contig5183:2238..2312 | 1622816530.720619-UTR-L-elsbetiae_contig5183:2238..2312 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig5183 2239..2312 + |
1691683626.7332225-UTR-L-elsbetiae_contig5183:2238..2312 | 1691683626.7332225-UTR-L-elsbetiae_contig5183:2238..2312 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig5183 2239..2312 + |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816530.7312996-CDS-L-elsbetiae_contig5183:2312..2675 | 1622816530.7312996-CDS-L-elsbetiae_contig5183:2312..2675 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5183 2313..2675 + |
1691683626.7441661-CDS-L-elsbetiae_contig5183:2312..2675 | 1691683626.7441661-CDS-L-elsbetiae_contig5183:2312..2675 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5183 2313..2675 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5183.13266.1 >prot_L-elsbetiae_contig5183.13266.1 ID=prot_L-elsbetiae_contig5183.13266.1|Name=mRNA_L-elsbetiae_contig5183.13266.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=121bp
MADWRARRKALRGNESRIVELASRWSTSIEPIDRHNGNESRKLFLDACLS HLKKSTALSNEERSMWETVGDVDFLRLKARHTFDLLGSELTADEWAKLLV VPLEQAAATRDKGLATQLVKA back to topmRNA from alignment at L-elsbetiae_contig5183:2239..2675+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig5183.13266.1 ID=mRNA_L-elsbetiae_contig5183.13266.1|Name=mRNA_L-elsbetiae_contig5183.13266.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=437bp|location=Sequence derived from alignment at L-elsbetiae_contig5183:2239..2675+ (Laminarionema elsbetiae ELsaHSoW15) CAGAAGCACGCAGCTGGAGTCCTCCAAGAATAACCGACTGGTGAGGCCAA
CGCGAAGCACTGCGAGGCCCAAGGATGGCCGACTGGCGAGCTAGGCGCAA
AGCACTGCGAGGAAACGAGAGCCGCATAGTGGAACTCGCGTCACGTTGGA
GCACCTCAATTGAGCCCATCGACAGGCACAACGGCAACGAGAGCAGAAAA
CTGTTTCTGGACGCGTGTCTGAGCCACCTGAAGAAATCAACCGCTTTGTC
AAATGAAGAAAGGTCGATGTGGGAGACGGTCGGTGACGTAGACTTCCTTC
GCCTAAAAGCCAGGCATACTTTCGACCTCCTCGGCTCCGAGCTGACAGCC
GACGAGTGGGCGAAGCTGCTAGTGGTTCCGCTCGAGCAGGCCGCCGCAAC
GAGAGACAAGGGACTTGCAACGCAGCTGGTGAAGGCA back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig5183:2239..2675+ >mRNA_L-elsbetiae_contig5183.13266.1 ID=mRNA_L-elsbetiae_contig5183.13266.1|Name=mRNA_L-elsbetiae_contig5183.13266.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=726bp|location=Sequence derived from alignment at L-elsbetiae_contig5183:2239..2675+ (Laminarionema elsbetiae ELsaHSoW15) ATGGCCGACTGGCGAGCTAGGCGCAAAGCACTGCGAGGAAACGAGAGCCG CATAGTGGAACTCGCGTCACGTTGGAGCACCTCAATTGAGCCCATCGACA GGCACAACGGCAACGAGAGCAGAAAACTGTTTCTGGACGCGTGTCTGAGC CACCTGAAGAAATCAACCGCTTTGTCAAATGAAGAAAGGTCGATGTGGGA GACGGTCGGTGACGTAGACTTCCTTCGCCTAAAAGCCAGGCATACTTTCG ACCTCCTCGGCTCCGAGCTGACAGCCGACGAGTGGGCGAAGCTGCTAGTG GTTCCGCTCGAGCAGGCCGCCGCAACGAGAGACAAGGGACTTGCAACGCA GCTGGTGAAGGCAATGGCCGACTGGCGAGCTAGGCGCAAAGCACTGCGAG GAAACGAGAGCCGCATAGTGGAACTCGCGTCACGTTGGAGCACCTCAATT GAGCCCATCGACAGGCACAACGGCAACGAGAGCAGAAAACTGTTTCTGGA CGCGTGTCTGAGCCACCTGAAGAAATCAACCGCTTTGTCAAATGAAGAAA GGTCGATGTGGGAGACGGTCGGTGACGTAGACTTCCTTCGCCTAAAAGCC AGGCATACTTTCGACCTCCTCGGCTCCGAGCTGACAGCCGACGAGTGGGC GAAGCTGCTAGTGGTTCCGCTCGAGCAGGCCGCCGCAACGAGAGACAAGG GACTTGCAACGCAGCTGGTGAAGGCA back to top
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