mRNA_L-elsbetiae_contig515.13225.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig515.13225.1
Unique NamemRNA_L-elsbetiae_contig515.13225.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig515.13225.1 vs. uniprot
Match: D8LEH5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEH5_ECTSI)

HSP 1 Score: 403 bits (1035), Expect = 9.240e-132
Identity = 222/319 (69.59%), Postives = 246/319 (77.12%), Query Frame = 3 
Query:  603 MDVQGVLRWLVGAKIPVSKAMPLVSALAKAGVRDADAIGSLGADDLAAAVPDKPLRNKIRAKLQAGRGGKRGXXXXXXXXXXXXXXXXXXXXXLKTSSAKGADKQ-AAAAERAPEPSGSSLSDAKLAEIEVKINRSPVMVLWAAEVAQRLSFDWGESVTIGRAVADWLALRKGEHLGLLEADGAAEGAAREETKDLPTRTVEMMGQDFTLRQTSGGWRALSKGKLVPAKRVHAFLCKAFGENLGPARAALRALAAAIPQPQVESTTRAMALYESFRPEVPRGKAGWGQSGMFRLRKVLELKEDLLREAPSGGGAPACGG 1556
            MDVQG+LRWLV AKIPV KAMPLVSALA AGVRD+D I SLG D LA  V DKP   KIRAK+  G+GGKR                          S  GADK  AAAAERAPEP  SSLSD +LA++E+KINRSPVMVLWAAEVAQRLSFDW E++T+GRAVADWLAL+KGEHLGLLEAD  AE AA EET DLPTRTVEMMGQDFTLR+T GGWRA+SKGK+VPAKRVH FLCKA+G NLGPARA+LRALAA IPQ  VE++ RAM LYESFRP V RGKAGWGQSGMFRL  VL+L+++L+RE   GG   AC G
Sbjct:    1 MDVQGILRWLVDAKIPVGKAMPLVSALAAAGVRDSDGIASLGEDRLADTVTDKPSLRKIRAKI-FGKGGKRSAGGSASNESGSTTSKRARP------SVSGADKTLAAAAERAPEPPCSSLSDEQLAQVEIKINRSPVMVLWAAEVAQRLSFDWSEAITLGRAVADWLALKKGEHLGLLEADEEAERAAMEETDDLPTRTVEMMGQDFTLRRTEGGWRAISKGKVVPAKRVHTFLCKAYGVNLGPARASLRALAAEIPQRHVETSIRAMVLYESFRPAVARGKAGWGQSGMFRLATVLKLRDELVREGVGGGXXXACDG 312
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BLAST of mRNA_L-elsbetiae_contig515.13225.1 vs. uniprot
Match: A0A7S0BLR5_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BLR5_9RHOD)

HSP 1 Score: 125 bits (315), Expect = 6.330e-28
Identity = 98/307 (31.92%), Postives = 150/307 (48.86%), Query Frame = 3 
Query:  606 DVQGVLRWLVG-AKIPVSKAMPLVSALAKAGVRDADAIGSLGADDLAAAVPDKPLRNKIRAKLQAGRGGKRGXXXXXXXXXXXXXXXXXXXXXLKTSSAKGADKQAAAAERAPEPSGSSLSDAKLAEIEVKINRSPVMVLWAAEVAQRLSFDWGESVTIGRAVADWLALRKGEHLGLLE-ADGAAEGAAREETKDLPTRTVEMMGQDFT-LRQTSG---GWRALSK-GKLVPAKRVHAFLCKAFGENLGPARAALRALAAAIPQPQVESTTRAMALYESFRPEVPRGKAGWGQSGMFRLRKVLELKE 1505
            DV  VL  LV   KI V  AM L+ +L  +GV+D  ++  L    L   VPD  +R KI A L+    G                          +        +AAA     EP   +L+ A L  +EV +NRSP+M+LWA  VA++  FDW   +++ +A ADW A +KGE+ G+L+         +RE+ ++     +E++G     +R+T G   G+RAL   G+ +   +   ++ + FG NL  A  A R L+ AIP  ++ S     ++YE FRP+V  G AGWG  G  +  ++L  K+
Sbjct:    6 DVPIVLSVLVKQCKIDVRAAMQLIPSLLSSGVKDESSLRGLSDSKLKKVVPDAKIRRKILAGLKKKPAGA--------------------TKASPSXXXXXXXXEAAAEAHIVEPEARTLTPADLKALEVVVNRSPLMILWACSVAKQRGFDWNSCLSLAQASADWYARKKGEYHGILQHKTPPTVDKSREDLEE-----IELVGVRINAVRKTEGKEVGYRALDDDGREISPSKPWTYIRRNFGANLEHAYGACRDLSEAIPMEELVSGPTTYSVYEKFRPDVAYGAAGWGSRGRIKFDQLLLTKQ 287
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BLAST of mRNA_L-elsbetiae_contig515.13225.1 vs. uniprot
Match: A0A7C3NZX3_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7C3NZX3_9PROT)

HSP 1 Score: 118 bits (296), Expect = 4.730e-27
Identity = 67/170 (39.41%), Postives = 96/170 (56.47%), Query Frame = 3 
Query:  990 VKINRSPVMVLWAAEVAQRLSFDWGESVTIGRAVADWLALRKGEHLGLLEADGAAEGAAREETKDLPTRTVEMMGQDFTLRQTSGGWRALSKGKLVPAKRVHAFLCKAFGENLGPARAALRALAAAIPQPQVESTTRAMALYESFRPEVPRGKAGWGQSGMFRLRKVLEL 1499
            V +NR+PV+ LWAA VA+RL FDW ES+T+GRAVA   A  KG  LG+           R + K      V+++ +   + +T  G RALSKG  +  + VH +L   FG  L   R A+  LA ++P  ++ +   A  LYE FRPE+P GK GWG +G+  L ++  +
Sbjct:    8 VTVNRAPVLTLWAAVVAERLGFDWDESLTMGRAVAGLNACSKGRALGIFHPRPRELEEKRRKLKHGEELQVDLLHRAVPVVRTKEGLRALSKGNPIAPESVHRYLEGKFGAALAAVRKAMTMLARSLPSEELAAV--AYRLYEEFRPEIPPGKKGWGVAGVLDLGRIRSM 175
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BLAST of mRNA_L-elsbetiae_contig515.13225.1 vs. uniprot
Match: UPI0019B02185 (Uncharacterized protein n=1 Tax=Anaerolineales bacterium TaxID=2073117 RepID=UPI0019B02185)

HSP 1 Score: 116 bits (290), Expect = 2.950e-26
Identity = 65/172 (37.79%), Postives = 101/172 (58.72%), Query Frame = 3 
Query:  987 EVKINRSPVMVLWAAEVAQRLSFDWGESVTIGRAVADWLALRKGEHLGLLEADGAAE-GAAREETKDLPTRTVEMMGQDFTLRQTSGGWRALSKGKLVPAKRVHAFLCKAFGENLGPARAALRALAAAIPQPQVESTTRAMALYESFRPEVPRGKAGWGQSGMFRLRKVLEL 1499
            ++KINR+PV+ LWAA VA+RL ++  E++T+G+AVA   A  KG  LG+ E     + G  +++ K      +E++G+     +T+ G+RA  KG+ +  + V  +L + FGE+L  AR A+  LA A P  ++E  T A +LYE FRP++P G  GWG  G      +  L
Sbjct:    5 KIKINRAPVLTLWAAVVAERLGYNQSEALTLGKAVAGLNAQSKGRRLGIYEEKKDEDKGKDKKDEKPDKLEFIELLGRGIPAIKTAHGFRAAIKGEEIDPESVEKYLKQKFGEDLDEARGAMEKLAKAYPPKKLE--TEAYSLYEKFRPKIPEGAKGWGAKGELDFDYIKSL 174
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BLAST of mRNA_L-elsbetiae_contig515.13225.1 vs. uniprot
Match: A0A3N5M0K4_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3N5M0K4_9CHLR)

HSP 1 Score: 115 bits (287), Expect = 7.050e-26
Identity = 69/170 (40.59%), Postives = 93/170 (54.71%), Query Frame = 3 
Query:  990 VKINRSPVMVLWAAEVAQRLSFDWGESVTIGRAVADWLALRKGEHLGLLEADGAAEGAAREETKDLPTRTVEMMGQDFTLRQTSGGWRALSKGKLVPAKRVHAFLCKAFGENLGPARAALRALAAAIPQPQVESTTRAMALYESFRPEVPRGKAGWGQSGMFRLRKVLEL 1499
            +K+NR+PVM LWA  VA+RL FD  E++T+G+ V    A  KG+ LG+ +        ARE   D     +EM+G+      T  G RA++K K V  + V  +L K F ++LG  R A+  LA A  +P  E   RA  LYE FRPEVP GK GWG  G   +  +  L
Sbjct:    6 IKVNRAPVMTLWAVVVAERLGFDHDEALTLGKVVTGLNAQSKGQRLGIFDPGEEKREKAREHKPD-EVFWIEMLGRPVPAVNTEEGIRAVNKDKPVDPQSVERYLEKKFSDDLGDVRKAMEELARAF-EP-AELAKRAYPLYEKFRPEVPEGKKGWGALGDLDIEAIRSL 172
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BLAST of mRNA_L-elsbetiae_contig515.13225.1 vs. uniprot
Match: A0A3N5RSX1_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3N5RSX1_9CHLR)

HSP 1 Score: 113 bits (282), Expect = 4.610e-25
Identity = 73/191 (38.22%), Postives = 103/191 (53.93%), Query Frame = 3 
Query:  975 LAEIEVKINRSPVMVLWAAEVAQRLSFDWGESVTIGRAVADWLALRKGEHLGLLE--------------ADGAAEGAAREETKDLPTRTVEMMGQDFTLRQTSGGWRALSKGKLVPAKRVHAFLCKAFGENLGPARAALRALAAAIPQPQVESTTRAMALYESFRPEVPRGKAGWGQSGMFRLRKVLELKE 1505
            +A+ ++KINR+PV+ LWAA VA+RL +D   ++T+G+AVA   A  KG  LG+ E              A   AEG   E  K      +E++G+     +T  G RA  KG+ +    V ++L K FG++LG AR A+  LA A    Q+ES  +A  LYE FRP++P G  GWG  G   L  +  L E
Sbjct:    1 MAKKKIKINRAPVLTLWAAVVAERLGYDKETALTLGKAVAGLNAQSKGRKLGIYEEKKEEXXXXXXGKHALSEAEGKKEETVKP---EFIEILGRGVPAVKTPNGLRAAIKGEPIHDGSVESYLQKKFGDDLGEARTAMEKLARAYTPKQLES--KAYDLYEKFRPKIPEGTKGWGAKGDLDLDYIRSLAE 186
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BLAST of mRNA_L-elsbetiae_contig515.13225.1 vs. uniprot
Match: A0A1G0FTS1_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium RBG_16_66_13 TaxID=1798267 RepID=A0A1G0FTS1_9GAMM)

HSP 1 Score: 112 bits (281), Expect = 5.040e-25
Identity = 71/172 (41.28%), Postives = 104/172 (60.47%), Query Frame = 3 
Query:  987 EVKINRSPVMVLWAAEVAQRLSFDWGESVTIGRAVADWLALRKGEHLGLLEA-DGAAEGAAREETKDLPTRTVEMMGQDFTLRQTSGGWRALSKGKLVPAKRVHAFLCKAFGENLGPARAALRALAAAIPQPQVESTTRAMALYESFRPEVPRGKAGWGQSGMFRLRKVLEL 1499
            ++K+NR+PVM LWAA VA+RL +D   S+++G+AVA   A  KG  LG+  A +G+++ A R + K      V ++G+     ++  G RA  KG  V +  V  +L   FGE+L   RAA++ALA +  +P+  +  RA ALYE FRP VP+GK GWG +G   L  + EL
Sbjct:    5 KIKVNRAPVMTLWAAVVAERLGYDEDASLSLGKAVAGLNAQSKGRSLGIYAAKEGSSKEADRGQAKS-EASLVMLLGRPVPTVRSKHGLRASIKGAEVESAPVRKYLESKFGEDLADVRAAMQALAQSY-EPEALNE-RAFALYERFRPAVPKGKQGWGAAGELDLGVLREL 173
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BLAST of mRNA_L-elsbetiae_contig515.13225.1 vs. uniprot
Match: A0A317F9U6_9PROT (Uncharacterized protein n=1 Tax=Falsiroseomonas bella TaxID=2184016 RepID=A0A317F9U6_9PROT)

HSP 1 Score: 112 bits (279), Expect = 1.070e-24
Identity = 71/185 (38.38%), Postives = 100/185 (54.05%), Query Frame = 3 
Query:  981 EIEVKINRSPVMVLWAAEVAQRLSFDWGESVTIGRAVADWLALRKGEHLGLLEADGAAEGAAREETKDLPT--RTVEMMGQDFTLRQTSGG--WRALSKGKLVPAKRVHAFLCKAFGENLGPARAALRALAAAIPQPQVESTTRAMALYESFRPEVPRGKAGWGQSGMFRLRKVLELKEDLLREA 1523
            E  +K+NR+PV+ LWAA VA+RL      ++++  AVA   A  K + LGL E        + E+ +D+PT   TV ++G+D  +   + G    A   GK  PA+ V  +L +AFGE LG AR A+ ALAA+ P  ++        LYE FRPEVP G  GWG  G   + K+ E   D  R +
Sbjct:    4 ETPIKVNRAPVLTLWAAVVAERLGHPPDTALSLASAVAGTAAHAKAKRLGLAED----RPQSLEDLRDVPTLRHTVRLLGKDIGMTADADGVVLAAGRDGKPSPAEPVRTYLQRAFGERLGEARNAMEALAASAPPDELNRV--GFRLYERFRPEVPEGVKGWGAKGELYVAKIREASADEFRRS 182
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BLAST of mRNA_L-elsbetiae_contig515.13225.1 vs. uniprot
Match: A0A522PXA1_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A522PXA1_9BACT)

HSP 1 Score: 111 bits (278), Expect = 1.540e-24
Identity = 68/170 (40.00%), Postives = 95/170 (55.88%), Query Frame = 3 
Query:  990 VKINRSPVMVLWAAEVAQRLSFDWGESVTIGRAVADWLALRKGEHLGLLEADGAAEGAAREETKDLPTRTVEMMGQDFTLRQTSGGWRALSKGKLVPAKRVHAFLCKAFGENLGPARAALRALAAAIPQPQVESTTRAMALYESFRPEVPRGKAGWGQSGMFRLRKVLEL 1499
            ++INR+PV+ LWAA VA+RL FD  E++T+GRAVA   A  KG  LGL +    AE   R +        V+++ +     QT  G RALSK + +    V  +L   FG+ L  A+ A+  LA + P  ++ S  +A ALYE FRP +P G  GWG +G   L +V  L
Sbjct:    5 IRINRAPVLTLWAAVVAERLGFDRDEALTLGRAVAGLNAYSKGVSLGLYKPTPEAERERRHKRAKGEVLQVDLLHRAVPSVQTHEGLRALSKDQPISPSSVDRYLQGKFGDRLDDAKKAMERLARSWPGEELSS--QAYALYEKFRPTIPAGIRGWGAAGNLDLNRVASL 172
[Close]
BLAST of mRNA_L-elsbetiae_contig515.13225.1 vs. uniprot
Match: A0A7C5Z8P6_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7C5Z8P6_9BACT)

HSP 1 Score: 110 bits (276), Expect = 2.120e-24
Identity = 66/172 (38.37%), Postives = 92/172 (53.49%), Query Frame = 3 
Query:  990 VKINRSPVMVLWAAEVAQRLSFDWGESVTIGRAVADWLALRKGEHLGLLEADGAAEGAAREETKDLPTRTVEMMGQDFTLRQTSGGWRALSKGKLVPAKRVHAFLCKAFGENLGPARAALRALAAAIPQPQVESTTRAMALYESFRPEVPRGKAGWGQSGMFRLRKVLELKE 1505
            +KINR+PV+ LWAA VA+RL FDW E++T+GRAVA   A  KG  LGL       E   R +        ++++ +     QT  G RALSK + +    V  +L + FG  L  AR A+  LA + P   + +   A  LYE FRP +P G  GWG +G   L ++  L +
Sbjct:    5 IKINRAPVLTLWAAVVAERLGFDWDEALTLGRAVAGLNAYSKGVSLGLYRPTPEGERERRRKRAKGEIVQIDLLHRAVPAVQTPEGLRALSKDQPISPPSVERYLREKFGNRLEDARRAMERLARSWPPDDLAA--HAYNLYEKFRPAIPSGVRGWGAAGDLDLDRISSLAQ 174
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig515.13225.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEH5_ECTSI9.240e-13269.59Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S0BLR5_9RHOD6.330e-2831.92Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7C3NZX3_9PROT4.730e-2739.41Uncharacterized protein n=1 Tax=Betaproteobacteria... [more]
UPI0019B021852.950e-2637.79Uncharacterized protein n=1 Tax=Anaerolineales bac... [more]
A0A3N5M0K4_9CHLR7.050e-2640.59Uncharacterized protein n=1 Tax=Chloroflexi bacter... [more]
A0A3N5RSX1_9CHLR4.610e-2538.22Uncharacterized protein n=1 Tax=Chloroflexi bacter... [more]
A0A1G0FTS1_9GAMM5.040e-2541.28Uncharacterized protein n=1 Tax=Gammaproteobacteri... [more]
A0A317F9U6_9PROT1.070e-2438.38Uncharacterized protein n=1 Tax=Falsiroseomonas be... [more]
A0A522PXA1_9BACT1.540e-2440.00Uncharacterized protein n=1 Tax=Acidobacteria bact... [more]
A0A7C5Z8P6_9BACT2.120e-2438.37Uncharacterized protein n=1 Tax=Acidobacteria bact... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig515contigL-elsbetiae_contig515:21182..27275 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score405.2
Seed ortholog evalue2.9e-110
Seed eggNOG ortholog2880.D8LEH5
Hectar predicted targeting categoryother localisation
EggNOG OGs2E2U1@1,2SA0G@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-21_004660.1
Exons5
Model size2301
Cds size981
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816526.95387-UTR-L-elsbetiae_contig515:21181..218991622816526.95387-UTR-L-elsbetiae_contig515:21181..21899Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig515 21182..21899 -
1691683624.0000858-UTR-L-elsbetiae_contig515:21181..218991691683624.0000858-UTR-L-elsbetiae_contig515:21181..21899Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig515 21182..21899 -
1622816527.0337036-UTR-L-elsbetiae_contig515:26673..272751622816527.0337036-UTR-L-elsbetiae_contig515:26673..27275Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig515 26674..27275 -
1691683624.068137-UTR-L-elsbetiae_contig515:26673..272751691683624.068137-UTR-L-elsbetiae_contig515:26673..27275Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig515 26674..27275 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816526.9667306-CDS-L-elsbetiae_contig515:21899..221231622816526.9667306-CDS-L-elsbetiae_contig515:21899..22123Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig515 21900..22123 -
1691683624.0119426-CDS-L-elsbetiae_contig515:21899..221231691683624.0119426-CDS-L-elsbetiae_contig515:21899..22123Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig515 21900..22123 -
1622816526.9765575-CDS-L-elsbetiae_contig515:22508..226561622816526.9765575-CDS-L-elsbetiae_contig515:22508..22656Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig515 22509..22656 -
1691683624.0219717-CDS-L-elsbetiae_contig515:22508..226561691683624.0219717-CDS-L-elsbetiae_contig515:22508..22656Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig515 22509..22656 -
1622816526.991358-CDS-L-elsbetiae_contig515:23059..232391622816526.991358-CDS-L-elsbetiae_contig515:23059..23239Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig515 23060..23239 -
1691683624.0327961-CDS-L-elsbetiae_contig515:23059..232391691683624.0327961-CDS-L-elsbetiae_contig515:23059..23239Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig515 23060..23239 -
1622816527.001242-CDS-L-elsbetiae_contig515:23624..238861622816527.001242-CDS-L-elsbetiae_contig515:23624..23886Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig515 23625..23886 -
1691683624.043861-CDS-L-elsbetiae_contig515:23624..238861691683624.043861-CDS-L-elsbetiae_contig515:23624..23886Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig515 23625..23886 -
1622816527.0179873-CDS-L-elsbetiae_contig515:26506..266731622816527.0179873-CDS-L-elsbetiae_contig515:26506..26673Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig515 26507..26673 -
1691683624.0564382-CDS-L-elsbetiae_contig515:26506..266731691683624.0564382-CDS-L-elsbetiae_contig515:26506..26673Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig515 26507..26673 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig515.13225.1prot_L-elsbetiae_contig515.13225.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig515 21900..26673 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig515.13225.1

>prot_L-elsbetiae_contig515.13225.1 ID=prot_L-elsbetiae_contig515.13225.1|Name=mRNA_L-elsbetiae_contig515.13225.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=327bp
MDVQGVLRWLVGAKIPVSKAMPLVSALAKAGVRDADAIGSLGADDLAAAV
PDKPLRNKIRAKLQAGRGGKRGGAATAAAAAGSASSPGGAKKKLKTSSAK
GADKQAAAAERAPEPSGSSLSDAKLAEIEVKINRSPVMVLWAAEVAQRLS
FDWGESVTIGRAVADWLALRKGEHLGLLEADGAAEGAAREETKDLPTRTV
EMMGQDFTLRQTSGGWRALSKGKLVPAKRVHAFLCKAFGENLGPARAALR
ALAAAIPQPQVESTTRAMALYESFRPEVPRGKAGWGQSGMFRLRKVLELK
EDLLREAPSGGGAPACGGAKASSSRP*
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mRNA from alignment at L-elsbetiae_contig515:21182..27275-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig515.13225.1 ID=mRNA_L-elsbetiae_contig515.13225.1|Name=mRNA_L-elsbetiae_contig515.13225.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6094bp|location=Sequence derived from alignment at L-elsbetiae_contig515:21182..27275- (Laminarionema elsbetiae ELsaHSoW15)
CGTGAATATATAGTCTAGACTACAGTAGTCAGTATATATCTAGAGCGAAG
ATTACTGTATACTACTAGATAGATAGACTAGCTGTACACTATGAATGTAC
ATTGTATCTAGATTAGACTATTATCTACTGGTACTACAATAGGATATCTT
CTAGATACACTACTAGCTGTGCACTTCTATGAATGTACATAATAATTACA
CGCACGGGATAGACACGGCGCGGCATACAGAGTACACAATATCATGTAGA
TAATCTATCTATTTACATAGTATTGTAATAGATACGTATGTACACGCGTA
GGGGTGCACGGTACGTACGCAGAGGCATGTCATCGCGCGCATCTCGCGCG
AGGCTCGCGTGAGGCAACCCTCTTCCGAATCTCACATCGCGGCTTTTTGT
CGCGACCAAGATTCATGTGACCTTCCCGTCGGTTTAGGGGCGAGAGCTCT
GCCATCTAACCGACGCACGACGAACTAGCCCAGGGACAAAGATCGGATCC
ACCGCCCCTCCTTGGATCCGCCGGCGGGGCTCCGTGAATGGTAATTGCGG
GTCGACATTCATTTTGCAGTCGGTTATTTGCCCCAACGTCGACACCGCAC
CGATGGACGTGCAAGGCGTGCTGCGATGGCTCGTTGGTGCCAAAATCCCA
GTTTCCAAGGCGATGCCACTCGTCAGCGCCTTGGCCAAAGCCGGAGTCCG
AGATGCTGATGCCATTGGCTCTTTGGGAGCTGACGACCTTGCTGCCGCCG
TGCCGGACAAACCTCTCCGGTAAGTCGGAAGTCTCTCTCCGCGTACAACC
GCGGTATCAACTCAAAAGTGGATTTCATGGACGGGTGCAAGCAAGAAATG
TTGCATCGAGAACATTGTTGTTGAGAGGCGGTGGTGCCGCTTGCAAAAAA
ACATTTTGTTCGGGAGCATTTGAACTGACTCATCTCTGCGCATGGAAGCA
CCTCAACCCGATATTGCGCATGTTTCGCGCGTCCCGTTTCATCGACGGTT
GGTTTCTACGGGCCTGAAATCTCCAGAAACTCTGCAGATAAGCAAGCGCT
TTGGAAGGCCTTTCTCTGTCCGATTTGTTGTTCTCCTGAATCTAATTTCT
GGTGTGTTCAGCTCTCTTTTTCTATCTCGCCGCTGCGTCTCTCTGGTGGC
GTACATGCAGATCTAGAACATACTTCGAAGTATCATACAATAGATATGAA
GTCGTGACTCCGAGTAGTAAATCGTAAAAGCAGGTAAATAAATAGTACCA
TATCCTATGTACTAGTTTTAGAATAATGAGCCGCACGTCCCAACCCAATC
CAACCCAACCCCACCCACCCGCGGACCCACGGCCAACCCACCCAAACTCA
ACGCACCCGCGGATCCACGGCCCCAACGCAACCCAACCCAACCCAACCCA
ACCTAACGCGTTATACTTGTGAAGGTCGCTACATTCCGTGACGGTCATTG
CAGTCCTAATGACGAATTACGCCCGCGGCATCACCCCAAATTGCCTCGTT
TGCCTGAAAGAACCAATCCAATTGAATATACATAACCCTAAATCAAGACG
CCCGATAAGTTCGTCCAGGTGAGGCGCGGCAATGTAGGTGCCGCTGTTTA
TGACGTATGGTAAGTATTACTGTCTAATTCTAACTGGAGGAACCTCGAGC
TGTACGCCTGAACGTAATAAGCACTCCACCACGCGGGTCGTTGACGATGC
CGTTGTCTCCCAAGGAAAATTATTTGTATTCGCGGAAAGGGAACAATTAA
AAGTTGGGTGTGAAGGAGCCCCCCAACAAAGAACACGCACAAGAGAACAC
AACTGCCTGCAACACCTAACTCTGCCACCAATAATACAGCACCCTTCCAA
TCAATGTGCGCAGCTGCACACCACATGCGAAAGAGCACCCAAAGTGCGCA
GGCTCCCACAGCAAGATGCAGTATCTCTTTGCTGCAAACCAAAGTGCGCA
GGCTCCGAAGCAAGATGCAGTATCTCCCTGCTGCAAATACACAAATGAGC
TGCAAATGACAGGTCATGTATTTCTTCAGTCAAGCCCACACCAGTAAGCT
TCCGACTTGACCGCGACCCAGTCGTCGTACCTCTTCTCCAACTGGTCATT
GTCGTGGCCATTTATCAGTTCTATGTCGTGCTCGAGCAACTCTGCCTCTC
TCGCTTCTGCTTGCATAACTCCGCCCTCATGCTGCAACTGCTGGTCCGCA
TCCATCGCTGAAACGGTCGTTTTCTGTTTTTGGACCGCGTCGTCTAACTG
CCTCTGGATCTCCCAATCGTCCTGCATGTCCTGCATGTGGGACAGATCAT
CGCGCTCGTATTCTACGAAGGAGTTCGCCGCGGATTCCAGCACCCTCTCA
TCCGCCGCTGCTAGCTCTTGCTTCTTCCCTGGGAACCAGGTCCGCCAGTC
TTTTGAGTCGTTCGCGGGCGGTCATTCCTCTCACAACATGACAGAGCATG
TCGGTCAGATTCGGCCAAAATAATTCGTCATGAGGAGACCACCATTGCCT
GAGGGTTGGGTGCGCACCAACGACTTCGACCGCCTCGTTGGCACAGGCCA
CCCTTTGCCTCACAGCTATCTCGTCGTATACCTGACACGGGCAGGCCGAA
CGAAATAAAGAATGAATTGAGAAAGTTCAATTTCCCAACTGACAAAATGG
AAAAACATTCGGTCTTACCCTGTTCATGTGTTGCCGGGGCGCCCTTCTTG
ATTCTGGGAGTGAACCCATCGTACGTGGTGTCGTCTCGCTCCTCTCTCCC
CCTAGCGTGGGTGCTGCGGGTCTCTACTCAATTCGAGTCTCGTTTGCATA
GCAGTGCACACGTGACACTGAGCCTGATGCCTGATCATTTCATATGCGTG
ACGCATCAGATCTCCGGCTAGCATGGCTTTCTCATGTCAAACCCGGGGTT
TGCTCTTACGTAGCCCGGGTCTCCGAAAAACATTTTTACAAACGACCGTG
AAGCACGGCCATCTCTTGTCGGAGCATAAATCTACCGGGGGTTAACCGAA
TCCCAATTTTTCTTCCCCTCAGAAGGCAACAGATCGTCAATCGGTGCTCT
ATGGATGTTGTTCTCATCAAAAAGGAGGGCGATTTTGGTCGCCCGGTAAT
CAAGTTTGGGGGGCGCTATACGCGAGCGGGGTAACTTTGCCCGATATTTA
GAGCCTTTTTTTTCCCTCCTGGAGGATGAAGGGAAAAAAAGGTCGCGGCT
TCGCTGCTCCGCGGCTCATTACAACACGTACTTCTCATGTCCGCATCTAC
GTTTCTACGGTCTCCAGGCGCGGCAAGGCCGGAATCGTGTGAAGACAGCA
GCAACAACGATGCTGTACAACGTCCAAGCACTGCTTGTCGTCTCCCTTCT
CCGTCTCCCTTCTCCGTCTCCACGCTCTCACTGCCCCAGGAACAAGATTC
GCGCCAAGTTACAAGCGGGAAGAGGGGGCAAGCGCGGTGGAGCTGCTACT
GCTGCTGCTGCTGCTGGAAGTGCCTCTAGTCCCGGCGGCGCCAAGAAGAA
GCTGAAGACCTCTTCAGCAAAGGGGGCGGACAAACAAGCGGCCGCGGCCG
AGCGCGCGCCGGAACCTTCTGGTTCCTCGCTGTCGGACGCGAAGCTTGCC
GAGATCGAGGTCAAGATAAATCGGTCGCCGGTGATGGTGCTCTGGGCGGC
GGTGCGTTTCAATTTGTCCGTCGGATAGGCTTGCCTTTGGACCGGCTGAT
TGTGTGGTCTATCTAGTGGATAAGCCCATCTAACGAACACGCCATACGAC
GGGAGTTCGAACCTCATCAGGTGTCGCCTTTTTTCAGACACCTAACGACC
TCTTTTCCACGCAGGATTTGTCTGGTTTCGGGGAGAGTGTTGCGTACATA
CTGCTGTAGGGCGCTACGTAGGCCCCAGCCTTGTGATCAGCCCGCTAGCG
AACGCAGAAACCTACCGCACCCCCCAGTGTCTCTAACTCACGGGCTTCAA
GGATTTTTTATTTTGCGGCATATAGCGAAGGTTGATGTCCATCCACCCTC
TTGTTTCCATTGTTTGTGGCTCGACGACAATTACAGGAAGTGGCACAGCG
GCTGTCGTTCGATTGGGGCGAGTCGGTCACCATCGGCCGCGCCGTGGCGG
ATTGGTTGGCCTTGAGAAAGGGAGAGCATCTCGGCCTGCTGGAGGCGGAT
GGGGCGGCAGAGGGCGCGGCGAGGGAGGAGACGAAAGACCTCCCGACGCG
CACGGTGGAGATGATGGTGAGGAGCGCGCGTGCCTGGTGCGCCCACCGTA
CGCCAACTCCAAACACAGCCGGCTGTGCATTGCATGTAGCCTGTAGACAG
ATGCTCTCAAACGCGTGGCCCTGAATACGAAGGCGAACGGTGTGGGCTGT
ACGCGTAGCCTGAAGACAGATACCATCCACTCGAAGTTTGGGCCCTGCAC
ACAGGCGAGATTTTTCGGGCGCGGCCGAACCACCTTCTTCCACTGCACGT
GGTTCAGAATGCTGCATTGTGTTGAGTCCCGAGAATGGCGGCGTGATCAA
CGGTGGACGCCCGGTATCTTTGAACTCGCGGGGCTTCGGCTCACACACTC
CGCGTTGTTTCGTTCCTTTTTGGTGACGGGGTTTGCCCGCCTGTTGGCTG
TTACCCAACCTACCTACAGGGGCAAGACTTCACTCTTCGGCAAACGAGCG
GGGGGTGGCGTGCGCTCAGCAAGGGCAAGCTGGTGCCCGCCAAAAGGGTG
CACGCCTTCCTCTGCAAGGCCTTCGGCGAAAACCTGGGCCCCGCTCGAGC
GGCTTTGCGAGCCTTAGGTGACCAGGGCGGGGCCGCTGGTCCTTGTTAGC
TGTTTGCCTGTTTTCCTCTACCGGACACTGCTATGTATACAACCAAGCAA
AGACTTTTGGAGCTCATCGCACGTTTGCTTGCCGAAGACGTGTGCGACTC
TCAAGTGATGCTGCGGACAAGAGCACAACGCATGCCACCGTGGCATACAC
TATGCGCTACTGGCTGTGCTTCCCCCTGGTGTCGTGTCTTGCCGTGGTCT
GTTGCTGCTGTGCTTTACGCAACAGGTGGTCTATTCAATACGAGTGGAAC
TGCCTGTATGTAGTACGCCGACGGTCGATTAGACAGCGTACCGCCCATCG
CACACCTTTCTCACGCCATGCGCACCCTCCGTGCCCACACACTCGCTTAC
AGCGGCGGCGATCCCGCAGCCCCAGGTCGAGAGCACGACACGCGCCATGG
CCCTGTACGAGTCGTTTCGACCGGAGGTGCCCAGGGGAAAGGCTGGCTGG
GGGCAGTCCGGCATGTTTCGGCTGAGGAAGGTCTTGGAGCTGAAAGAGGA
TCTCTTGCGGGAGGCACCGTCTGGTGGCGGCGCCCCCGCTTGTGGAGGGG
CGAAGGCGTCTTCGTCGCGACCGTGAAGCAGAGAGGGCGCGCGAGGCTCG
CCTGAAAAGTGGTGACTTGCCGGCTCGTTCCGGGCTTTGCACGAAAGGCT
CCTCTTTGCCGCGATAGAAAAAGCGTTTTGGCAATCAATGTGTGCTTGTC
CGTATTTTATTTTGTAAGCTACATAAGTGTTTGTGTGTGTGGTTCTCCTG
GGTTCTATTTATTTACCTTTGCATTTTCTTCCCTTTGCGGCTGTCTTGTA
CATGTTGTGTCTGCTTTCGTGACAGAGTTGGGGTTATGCTTCGCTTACAC
CTGCCTACTTTAGTTTAACTTTCCCTCAAACCTCTTTCCGGGGTTGATGC
TGCTCGCCCGCTAACTCTGTGGGTAGGCAGGCCTGTCTTTTTCAGCGAAA
ATGTCGAAAACAAATGTATTTATTCTTGTCTTTATATTTGCCTTTTTATT
CAAAGTTCTACCAAACGATCAGCGACCTTGAGGTGTTGCGTCCGCTCTGC
AGGCAGCTTACTGCCCCCCCCCCCCCCCCCAAAGCTATAGAACAAAGTTG
AACGCCAGGCAAGAACAATGTCCCCGTCTGGTTTGGGCAATGGTGAAGCC
CCACATCGTCTGCCTCCGCCATCATTCCCTGGCGGAAATTGTGTCTTGGT
TGTTGAATTGCCCCCGCATAGTTCTGTGGGGGGCAGATCTACCAAATGGG
CATTGTTGACTTGCCGCACATAAAGGCTGGCGTTTATCGTTCTC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig515:21182..27275-

>mRNA_L-elsbetiae_contig515.13225.1 ID=mRNA_L-elsbetiae_contig515.13225.1|Name=mRNA_L-elsbetiae_contig515.13225.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1962bp|location=Sequence derived from alignment at L-elsbetiae_contig515:21182..27275- (Laminarionema elsbetiae ELsaHSoW15)
ATGGACGTGCAAGGCGTGCTGCGATGGCTCGTTGGTGCCAAAATCCCAGT
TTCCAAGGCGATGCCACTCGTCAGCGCCTTGGCCAAAGCCGGAGTCCGAG
ATGCTGATGCCATTGGCTCTTTGGGAGCTGACGACCTTGCTGCCGCCGTG
CCGGACAAACCTCTCCGATGGACGTGCAAGGCGTGCTGCGATGGCTCGTT
GGTGCCAAAATCCCAGTTTCCAAGGCGATGCCACTCGTCAGCGCCTTGGC
CAAAGCCGGAGTCCGAGATGCTGATGCCATTGGCTCTTTGGGAGCTGACG
ACCTTGCTGCCGCCGTGCCGGACAAACCTCTCCGGAACAAGATTCGCGCC
AAGTTACAAGCGGGAAGAGGGGGCAAGCGCGGTGGAGCTGCTACTGCTGC
TGCTGCTGCTGGAAGTGCCTCTAGTCCCGGCGGCGCCAAGAAGAAGCTGA
AGACCTCTTCAGCAAAGGGGGCGGACAAACAAGCGGCCGCGGCCGAGCGC
GCGCCGGAACCTTCTGGTTCCTCGCTGTCGGACGCGAAGCTTGCCGAGAT
CGAGGTCAAGATAAATCGGTCGCCGGTGATGGTGCTCTGGGCGGCGGAAC
AAGATTCGCGCCAAGTTACAAGCGGGAAGAGGGGGCAAGCGCGGTGGAGC
TGCTACTGCTGCTGCTGCTGCTGGAAGTGCCTCTAGTCCCGGCGGCGCCA
AGAAGAAGCTGAAGACCTCTTCAGCAAAGGGGGCGGACAAACAAGCGGCC
GCGGCCGAGCGCGCGCCGGAACCTTCTGGTTCCTCGCTGTCGGACGCGAA
GCTTGCCGAGATCGAGGTCAAGATAAATCGGTCGCCGGTGATGGTGCTCT
GGGCGGCGGAAGTGGCACAGCGGCTGTCGTTCGATTGGGGCGAGTCGGTC
ACCATCGGCCGCGCCGTGGCGGATTGGTTGGCCTTGAGAAAGGGAGAGCA
TCTCGGCCTGCTGGAGGCGGATGGGGCGGCAGAGGGCGCGGCGAGGGAGG
AGACGAAAGACCTCCCGACGCGCACGGTGGAGATGATGGAAGTGGCACAG
CGGCTGTCGTTCGATTGGGGCGAGTCGGTCACCATCGGCCGCGCCGTGGC
GGATTGGTTGGCCTTGAGAAAGGGAGAGCATCTCGGCCTGCTGGAGGCGG
ATGGGGCGGCAGAGGGCGCGGCGAGGGAGGAGACGAAAGACCTCCCGACG
CGCACGGTGGAGATGATGGGGCAAGACTTCACTCTTCGGCAAACGAGCGG
GGGGTGGCGTGCGCTCAGCAAGGGCAAGCTGGTGCCCGCCAAAAGGGTGC
ACGCCTTCCTCTGCAAGGCCTTCGGCGAAAACCTGGGCCCCGCTCGAGCG
GCTTTGCGAGCCTTAGGGGCAAGACTTCACTCTTCGGCAAACGAGCGGGG
GGTGGCGTGCGCTCAGCAAGGGCAAGCTGGTGCCCGCCAAAAGGGTGCAC
GCCTTCCTCTGCAAGGCCTTCGGCGAAAACCTGGGCCCCGCTCGAGCGGC
TTTGCGAGCCTTAGCGGCGGCGATCCCGCAGCCCCAGGTCGAGAGCACGA
CACGCGCCATGGCCCTGTACGAGTCGTTTCGACCGGAGGTGCCCAGGGGA
AAGGCTGGCTGGGGGCAGTCCGGCATGTTTCGGCTGAGGAAGGTCTTGGA
GCTGAAAGAGGATCTCTTGCGGGAGGCACCGTCTGGTGGCGGCGCCCCCG
CTTGTGGAGGGGCGAAGGCGTCTTCGTCGCGACCGTGACGGCGGCGATCC
CGCAGCCCCAGGTCGAGAGCACGACACGCGCCATGGCCCTGTACGAGTCG
TTTCGACCGGAGGTGCCCAGGGGAAAGGCTGGCTGGGGGCAGTCCGGCAT
GTTTCGGCTGAGGAAGGTCTTGGAGCTGAAAGAGGATCTCTTGCGGGAGG
CACCGTCTGGTGGCGGCGCCCCCGCTTGTGGAGGGGCGAAGGCGTCTTCG
TCGCGACCGTGA
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