mRNA_L-elsbetiae_contig5148.13222.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5148.13222.1 vs. uniprot
Match: A0A6H5JYR3_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYR3_9PHAE) HSP 1 Score: 150 bits (378), Expect = 2.260e-42 Identity = 77/142 (54.23%), Postives = 96/142 (67.61%), Query Frame = 1 Query: 1 HPEGVDYIGCYNAGQDGWTTTGGPSGSTNKLDPAELYRMFDGLGAGDGGLKEEGVMTLEKCAGICA--GFSYFGLESAMKCVCGDEVQGTSRTN--------CGLEDDHA--IPEHKFLCSGDSRVLCGTDDKVSIYTLDGS 390 HP G+ Y GCY+AG G T GP+GS N DPAE YRMFDG+ D G+ + VMTLEKCA C G YFGLESA+KC+CGDE+ G+ + CG++ +PE+K+LCSGDSRVLCGTDD +S+Y+LDGS Sbjct: 77 HPSGITYEGCYSAGIFG--TADGPTGSANDADPAENYRMFDGID--DDGVNADKVMTLEKCAATCTAQGTRYFGLESAVKCLCGDELAGSPTDDVYGEGGSVCGIDITFGGDVPEYKYLCSGDSRVLCGTDDHISVYSLDGS 214
BLAST of mRNA_L-elsbetiae_contig5148.13222.1 vs. uniprot
Match: A0A6H5K6V8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6V8_9PHAE) HSP 1 Score: 150 bits (378), Expect = 8.860e-41 Identity = 77/142 (54.23%), Postives = 96/142 (67.61%), Query Frame = 1 Query: 1 HPEGVDYIGCYNAGQDGWTTTGGPSGSTNKLDPAELYRMFDGLGAGDGGLKEEGVMTLEKCAGICA--GFSYFGLESAMKCVCGDEVQGTSRTN--------CGLEDDHA--IPEHKFLCSGDSRVLCGTDDKVSIYTLDGS 390 HP G+ Y GCY+AG G T GP+GS N DPAE YRMFDG+ D G+ + VMTLEKCA C G YFGLESA+KC+CGDE+ G+ + CG++ +PE+K+LCSGDSRVLCGTDD +S+Y+LDGS Sbjct: 199 HPSGITYEGCYSAGIFG--TADGPTGSANDADPAENYRMFDGID--DDGVNADKVMTLEKCAATCTAQGTQYFGLESAVKCLCGDELVGSPTDDVYGDGGSVCGIDITFGGDVPEYKYLCSGDSRVLCGTDDHISVYSLDGS 336
BLAST of mRNA_L-elsbetiae_contig5148.13222.1 vs. uniprot
Match: A0A6H5K384_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K384_9PHAE) HSP 1 Score: 150 bits (378), Expect = 1.940e-40 Identity = 77/142 (54.23%), Postives = 96/142 (67.61%), Query Frame = 1 Query: 1 HPEGVDYIGCYNAGQDGWTTTGGPSGSTNKLDPAELYRMFDGLGAGDGGLKEEGVMTLEKCAGICA--GFSYFGLESAMKCVCGDEVQGTSRTN--------CGLEDDHA--IPEHKFLCSGDSRVLCGTDDKVSIYTLDGS 390 HP G+ Y GCY+AG G T GP+GS N DPAE YRMFDG+ D G+ + VMTLEKCA C G YFGLESA+KC+CGDE+ G+ + CG++ +PE+K+LCSGDSRVLCGTDD +S+Y+LDGS Sbjct: 139 HPSGITYEGCYSAGIFG--TADGPTGSANDADPAENYRMFDGID--DDGVNADKVMTLEKCAATCTAQGTQYFGLESAVKCLCGDELVGSPTDDVYGDGGSVCGIDITFGGDVPEYKYLCSGDSRVLCGTDDHISVYSLDGS 276
BLAST of mRNA_L-elsbetiae_contig5148.13222.1 vs. uniprot
Match: A0A6H5K566_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K566_9PHAE) HSP 1 Score: 150 bits (378), Expect = 1.170e-39 Identity = 77/142 (54.23%), Postives = 96/142 (67.61%), Query Frame = 1 Query: 1 HPEGVDYIGCYNAGQDGWTTTGGPSGSTNKLDPAELYRMFDGLGAGDGGLKEEGVMTLEKCAGICA--GFSYFGLESAMKCVCGDEVQGTSRTN--------CGLEDDHA--IPEHKFLCSGDSRVLCGTDDKVSIYTLDGS 390 HP G+ Y GCY+AG G T GP+GS N DPAE YRMFDG+ D G+ + VMTLEKCA C G YFGLESA+KC+CGDE+ G+ + CG++ +PE+K+LCSGDSRVLCGTDD +S+Y+LDGS Sbjct: 199 HPSGITYEGCYSAGIFG--TADGPTGSANDADPAENYRMFDGID--DDGVNADKVMTLEKCAATCTAQGTQYFGLESAVKCLCGDELVGSPTDDVYGDGGSVCGIDITFGGDVPEYKYLCSGDSRVLCGTDDHISVYSLDGS 336
BLAST of mRNA_L-elsbetiae_contig5148.13222.1 vs. uniprot
Match: D7FMV1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMV1_ECTSI) HSP 1 Score: 139 bits (350), Expect = 9.320e-36 Identity = 74/137 (54.01%), Postives = 93/137 (67.88%), Query Frame = 1 Query: 4 PEGVDYIGCYNAGQDGWTTTGGPSGSTNKLDPAELYRMFDGLGAGDGGLKEEGVMTLEKCAGICA--GFSYFGLESAMKCVCGDEVQGT------SRTNCGLE--DDHAIPEHKFLCSGDSRVLCGTDDKVSIYTLD 384 PE V Y+GCY AG G GP GS N DPAE YR+FDG+ D G+ + VMTLEKCA IC G +YFGLESA+KC+CGDE+ G+ + CG++ DD IPE+KFLCSG+S VLCGTD +S+Y+L+ Sbjct: 214 PEDVAYVGCYPAGMFGEAE--GPEGSANDEDPAENYRLFDGID--DEGVAADKVMTLEKCAAICTEQGTAYFGLESAVKCLCGDELDGSPYDDVRGESVCGVDYTDDVNIPEYKFLCSGESTVLCGTDTHMSVYSLN 346
BLAST of mRNA_L-elsbetiae_contig5148.13222.1 vs. uniprot
Match: A0A6H5KQ76_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ76_9PHAE) HSP 1 Score: 103 bits (258), Expect = 3.430e-23 Identity = 60/136 (44.12%), Postives = 78/136 (57.35%), Query Frame = 1 Query: 1 HPEGVDYIGCYNAGQDGWTTTGGPSGSTNKLDPAELYRMFDGLGAGDGGLKEEGVMTLEKCAGICAGFSYFGLESAMKCVCGDEVQGT------SRTNCGLE--DDHAIPEHKFLCSGDSRVLCGTDDKVSIYTLD 384 +P GV Y+GCY AG G GP GS N DPAE YR+FDG+ D G+ + VMTLE C+CGDE+ G+ + CG++ DD IPE+KFLCSG+S VLCGTD +S+Y+L+ Sbjct: 183 YPAGVAYVGCYPAGMFGEAE--GPEGSANGEDPAENYRLFDGID--DEGVAADKVMTLE-------------------CLCGDELDGSPYDDVRGESVCGVDYTDDVNIPEYKFLCSGESTVLCGTDTHMSVYSLN 295
BLAST of mRNA_L-elsbetiae_contig5148.13222.1 vs. uniprot
Match: A0A6H5JIW9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIW9_9PHAE) HSP 1 Score: 97.1 bits (240), Expect = 2.430e-22 Identity = 59/131 (45.04%), Postives = 73/131 (55.73%), Query Frame = 1 Query: 1 HPEGVDYIGCYNAGQDGWTTTGGPSGSTNKLDPAELYRMFDGLGAGDGGLKEEGVMTLEKCAGICA--GFSYFGLESAMKCVCGDEVQGTSRTNCGLEDDHAIPEHKFLCSGDSRVLCGTDDKVSIYTLDG 387 HP G+ Y Y+ G G T GP+GS N AE Y MFDG+ D G+ + V TLEKCA C G YFG E A+K + R + P++K LCSGDSRVLCGTDD +S+Y+LDG Sbjct: 60 HPSGITYERWYSVGIFG--TADGPTGSANYH--AENYHMFDGID--DDGVNADKVTTLEKCAATCTARGTQYFGREFAVKPYRQRLRRRGLRVRIDITFGGDAPDYKCLCSGDSRVLCGTDDHISVYSLDG 184
BLAST of mRNA_L-elsbetiae_contig5148.13222.1 vs. uniprot
Match: D7G5F7_ECTSI (WSC domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5F7_ECTSI) HSP 1 Score: 67.8 bits (164), Expect = 9.670e-11 Identity = 30/62 (48.39%), Postives = 43/62 (69.35%), Query Frame = 1 Query: 235 CVCGDEVQGTSRTN--------CGLEDDHA--IPEHKFLCSGDSRVLCGTDDKVSIYTLDGS 390 C+CGD++ G+ + CG++ +PE+K+LCSGDSRVLCGTDD +S+Y+LDGS Sbjct: 50 CLCGDDLVGSPTDDVYGDGGSVCGIDITFGGDVPEYKYLCSGDSRVLCGTDDHISVYSLDGS 111
BLAST of mRNA_L-elsbetiae_contig5148.13222.1 vs. uniprot
Match: M7T1P2_EUTLA (Putative glyoxal oxidase protein n=1 Tax=Eutypa lata (strain UCR-EL1) TaxID=1287681 RepID=M7T1P2_EUTLA) HSP 1 Score: 64.3 bits (155), Expect = 2.550e-9 Identity = 27/72 (37.50%), Postives = 44/72 (61.11%), Query Frame = 1 Query: 166 MTLEKCAGICAGFSYFGLESAMKCVCGDEVQGTS--RTNCGLEDDHAIPEHKFLCSGDSRVLCGTDDKVSIY 375 MT+E+CAG+CA ++YFG+E A +C CG+ + GTS T C ++C GD + CG +++++Y Sbjct: 375 MTVERCAGVCASYAYFGVEYATQCFCGNVLSGTSAPETECS-----------YVCGGDGKEWCGAAERMNLY 435
BLAST of mRNA_L-elsbetiae_contig5148.13222.1 vs. uniprot
Match: A0A6H5JNN6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNN6_9PHAE) HSP 1 Score: 64.3 bits (155), Expect = 2.700e-9 Identity = 29/64 (45.31%), Postives = 42/64 (65.62%), Query Frame = 1 Query: 229 MKCVCGDE--------VQGTSRTNCGLEDDHA--IPEHKFLCSGDSRVLCGTDDKVSIYTLDGS 390 ++C+CGDE V G + CG++ +PE+K+LCSGDSRV CGTDD +S+Y++ GS Sbjct: 180 LQCLCGDELVGSPIDDVYGIGGSVCGIDITFGGDVPEYKYLCSGDSRVRCGTDDHISVYSIGGS 243 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5148.13222.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5148.13222.1 >prot_L-elsbetiae_contig5148.13222.1 ID=prot_L-elsbetiae_contig5148.13222.1|Name=mRNA_L-elsbetiae_contig5148.13222.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=140bp HPEGVDYIGCYNAGQDGWTTTGGPSGSTNKLDPAELYRMFDGLGAGDGGLback to top mRNA from alignment at L-elsbetiae_contig5148:7487..10002- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5148.13222.1 ID=mRNA_L-elsbetiae_contig5148.13222.1|Name=mRNA_L-elsbetiae_contig5148.13222.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2516bp|location=Sequence derived from alignment at L-elsbetiae_contig5148:7487..10002- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5148:7487..10002- >mRNA_L-elsbetiae_contig5148.13222.1 ID=mRNA_L-elsbetiae_contig5148.13222.1|Name=mRNA_L-elsbetiae_contig5148.13222.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=840bp|location=Sequence derived from alignment at L-elsbetiae_contig5148:7487..10002- (Laminarionema elsbetiae ELsaHSoW15)back to top |