mRNA_L-elsbetiae_contig5142.13216.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5142.13216.1
Unique NamemRNA_L-elsbetiae_contig5142.13216.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig5142.13216.1 vs. uniprot
Match: A0A6H5KYQ9_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYQ9_9PHAE)

HSP 1 Score: 552 bits (1423), Expect = 3.180e-193
Identity = 302/416 (72.60%), Postives = 326/416 (78.37%), Query Frame = 2
Query:  197 MVLGEAPSAACRRALQRAWQASSKEATTHERLEXXXXXXXXXXXXXXXXXXXXXGEAAAHDA--CVDGVERGIDFRLTTFNLLAPCYKRMHSEAA-PVAAIHEAGTGTGLLAMANRVRTQRTARESEFDGVWRERALETVDFIRRDMSSSDIICLQEFWLDPSYDAIFRSALGEDYDFHTVKRTGGKSDGVAVLLRRGKFDVRSKRGLSLSAVGDRVALVMHLRSLVGGEAGGGDGGQAAGEDLILVNTHLAFPHNALDRVNQMSQIEAVTRTVEGVIGEAGLPPMTPRVVVGDLNVEETDPVCRHLGKNGFRSAFASLHRERRVITHRNHRGEEVMVDHVFVKAPGFAGRRRGTGEPVAPGAAPEVPGLVPRLHEDVSVEEALLLPALVDTDEWSPHFSLSDHRPLTVRLKFPAE 1435
            M+LGEA SA CRR LQRAWQASS EA THE+LE                      E  A  A    D V RG++FRLTTFNLLAPCYKRMHSE + PV      G GTGLLA  NR + QRTARESEFDGVWRERALETVDFI R MSSSDIICLQEFWLDP+Y AIF+SAL EDY+F+TVKRTG KSDGVAVLLRRGKFDV S+ GLSLS +GDRVAL+MHLR         G GG   GED+ILVNTHLAFPHNALDRVNQMSQI AVT TVEG++ EAGLP MTPRVVVGDLNVEETDPVC HLG+NGFRSAF SLHRERRVITHRNHRGE+VM DHVFVKAPGFAGRRRG  + VAP  APE+PGLVPRL E+VSVEEAL+LP  VD  EW P+FSLSDHRPLTVRLKFP +
Sbjct:    1 MILGEASSAECRRTLQRAWQASSSEARTHEQLEEQQQCRVTPPS-----------EETARSAGESKDAVARGMEFRLTTFNLLAPCYKRMHSEVSTPVG-----GVGTGLLA--NRAKGQRTARESEFDGVWRERALETVDFICRHMSSSDIICLQEFWLDPAYHAIFQSALEEDYEFYTVKRTGLKSDGVAVLLRRGKFDVLSQLGLSLSCIGDRVALIMHLRE-------SGAGGGEVGEDMILVNTHLAFPHNALDRVNQMSQIRAVTDTVEGMMVEAGLPTMTPRVVVGDLNVEETDPVCGHLGRNGFRSAFTSLHRERRVITHRNHRGEDVMCDHVFVKAPGFAGRRRG--DSVAPATAPEIPGLVPRLCENVSVEEALVLPGEVDAAEWCPNFSLSDHRPLTVRLKFPPQ 389          
BLAST of mRNA_L-elsbetiae_contig5142.13216.1 vs. uniprot
Match: A0A835ZAD2_9STRA (Endonuclease/exonuclease/phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAD2_9STRA)

HSP 1 Score: 264 bits (674), Expect = 2.900e-80
Identity = 147/352 (41.76%), Postives = 202/352 (57.39%), Query Frame = 2
Query:  419 LTTFNLLAPCYKRMHSEAAPVAAIHEAGTGT--GLLAMANRVRTQRTARESEFDGVWRERALETVDFIRRDMSSSDIICLQEFWLDPSYDAIFRSALGEDYDFHTVKRTGGKSDGVAVLLRRGKFDVRSKRGLSLSAVGDRVALVMHLRSLVGGEAGGGDGGQAAGEDLILVNTHLAFPHNALDRVNQMSQIEAVTRTVEGVIGEAGLPPMTPRVVVGDLNVEETDPVCRHLGKNGFRSAFASLHR-ERRVITHRNHRGEEVMVDHVFV------------KAPGFAGRRRGTGEPVAPGAAPEVPGLVPRLHEDVSVEEALLLPALVDTDEWSPHFSLSDHRPLTVRLKFP 1429
            LTTFNLLAP YKR+  +A     +         GLL         R +RESE D +WR RA  TV+F++  M+ SDIIC QE+W   +Y  +FR  L ++Y F T +RTG K+DG+A+LLR+G     + +G+SL ++G+RVAL++H++                G D +L N HL FPHN  DR  Q  QI+ VT  ++    + GL   TPRV+VGD NVEE+DPVC HL   G++SAF++LH  ++ V+TH NH  EEVMVDHV+V            ++P    ++ G G   APG               +S+ +ALLLP  VD   W+  F+LSDHRPL VR+ +P
Sbjct:   47 LTTFNLLAPVYKRIDEQALRKEGLRPQSVDPEGGLLESLKETWQGRPSRESECDAMWRARARSTVEFVKESMTGSDIICFQEYWFQDAYQELFREQLEQEYSFFTKQRTGHKADGIAILLRKGSAAAAAAQGVSLCSIGNRVALLLHVKP-------------EGGRDFLLANCHLTFPHNLFDRQLQQQQIQGVTAALDEFAEQEGLAVDTPRVIVGDFNVEESDPVCAHLRDLGYKSAFSTLHSTDKHVVTHYNHNAEEVMVDHVWVLGLADSQHQRRGESPEGESQQEGEGGAGAPG---------------LSIGKALLLPKGVDDSRWNRSFALSDHRPLQVRIDWP 370          
BLAST of mRNA_L-elsbetiae_contig5142.13216.1 vs. uniprot
Match: A0A7S3A7G3_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A7G3_9RHOD)

HSP 1 Score: 192 bits (489), Expect = 1.210e-53
Identity = 118/341 (34.60%), Postives = 174/341 (51.03%), Query Frame = 2
Query:  419 LTTFNLLAPCYKRMHSEAAPVAAIHEAGTGTGLLAMANRVRTQRTARESEFDGVWRERALETVDFIRRDMSSSDIICLQEFWLDPSYDAIFRSALGEDYDFHTVKRTGGKSDGVAVLLRRGKFDVRSKRGLSLSAVGDRVALVMHLRSLVGGEAGGGDGGQAAGEDLILVNTHLAFPHNALDRVNQMSQIEAVTRTVEGVIGEAGLPPMTPRVVVGDLNVEETDPVCRHLGKNGFRSAFASLHRERRVITHRNHRGEEVMVDHVFVKAPGFAGRRRGTGEPVAPGAAPEVPG--LVPRLHEDVSVEEALLLPALVDTDEWSPHFSLSDHRPLTVRLKFPAE 1435
            + TFN+LAPCY+R+   +  V  + ++G G G      R       RES+F  +W  R  E   F++ D+   D++CLQEFW D  Y + F     +DY+  + +RTGGK+DG+  +LRRGKF V   + L     G+RVAL++  R                G  LI+VNTHL FPH+  DRV +  QI  +   ++G +   GL  + P ++ GD+N +  DPVC HL  N F ++F  +     V TH NHR E V VDH++ +   +     G  E  + G+  E+    LVPR        + ++ P   D   W   F LSDHR +++  +  AE
Sbjct:    8 VATFNVLAPCYRRLDELSVKVQVVEKSGIGPGNFGRRPR------PRESQFRDLWSARCSEMCAFVKADVF--DVVCLQEFWFDEGYVSKFSDCFMKDYELFSAQRTGGKADGLLTMLRRGKFHVEHMQKLEFKDAGNRVALLLCARLA------------DVGSLLIIVNTHLTFPHHEHDRVLRQGQISKLVEFIDGFVDRHGLENV-PVIIGGDMNGDHADPVCAHLRANCFVNSFVQVSGLEDVETHLNHRNERVFVDHIWYRKHIYGSPISGRLETDSSGSDDELRDTHLVPR--------DFIVKPQSEDLKPWVDDFQLSDHRLVSITFEVEAE 319          
BLAST of mRNA_L-elsbetiae_contig5142.13216.1 vs. uniprot
Match: A0A482S2T6_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S2T6_9ARCH)

HSP 1 Score: 155 bits (393), Expect = 3.170e-40
Identity = 93/243 (38.27%), Postives = 134/243 (55.14%), Query Frame = 2
Query:  413 FRLTTFNLLAPCYKRMHSEAAPVAAIHEAGTGTGLLAMANRVRTQRTARESEFDGVWRERALETVDFIRRD-MSSSDIICLQEFWLDPSYDAIFRSALGE-DYDFHTVKRTGGKSDGVAVLLRRGKFDVRSKRGLSLSAVGDRVALVMHLRSLVGGEAGGGDGGQAAGEDLILVNTHLAFPHNALDRVNQMSQIEAVTRTVEGVIGEAGLPPMTPRVVVGDLNVEETDPVCRHLGKNGFRSAF 1135
            F + +FNLLAP YKR+ S              TG              RES+ + +W  RAL T DF RR+ + S+DII LQEFWLD +Y  IF     +  YD H +KR G K DGVA++++   F+V     + LS +GDRVAL++ L+             + +G+DL++ NTHL+FPH+  DR++QM+Q++ +T  ++       +   T RV++GD NVE   PVC HL   G+ S F
Sbjct:   53 FNIVSFNLLAPVYKRLQS----------VDITTGF-----------RKRESQKEELWGARALRTADFFRREVLGSTDIIGLQEFWLDSAYRHIFEDEFAQAGYDVHVLKRPGKKLDGVALVIKSQDFEVLGSEHVFLSTLGDRVALLLWLKH------------RESGKDLLVANTHLSFPHSTADRLDQMTQMQNLTGVIDTFAHRYHIDYAT-RVIMGDFNVESKSPVCNHLRSVGYASCF 261          
BLAST of mRNA_L-elsbetiae_contig5142.13216.1 vs. uniprot
Match: W7U4G6_9STRA (Calcium-binding endonuclease exonuclease phosphatase family protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U4G6_9STRA)

HSP 1 Score: 162 bits (409), Expect = 6.190e-40
Identity = 106/293 (36.18%), Postives = 153/293 (52.22%), Query Frame = 2
Query:  410 DFRLTTFNLLAPCYKRMHSEAAPVAAIHEAGTGTGLLAMANRVRTQRTARESEFDGVWRERALETVDFIRRDMSSSDIICLQEFWL-DPSYDAIFRSALGEDYDFHTVKRTGGKSDGVAVLLRRGKFDVRSKRGLSLSAVGDRVALVMHLRSLVGGEAGGGDGGQAAGEDLILVNTHLAFPHNALDRVNQMSQIEAVTRTVEGVIGEAGLPPM-----TPRVVVGDLNVEETDPVC--------RHLGKNGFRSAFASLHRERRVITHRNHRGEEVMVDHVFVKAPGFAGRRR 1246
            D  ++TFN+LAPCYKRM                                RE++F      RALET  FIRR++ + DIICLQEF++ D  Y  +F S+L + YDF+   R   K DG+ VLLR+GKF +   RG +LS  G RV L+M L +L G  +      +  G+ +IL++THL+FPHN  D   Q  Q+ ++TR +E  +   G P +       +++ GD NV+ T+PV         +H+ + G R   A        +THR HRG++V VDH+F ++   A  RR
Sbjct:  150 DISISTFNILAPCYKRMKDGG----------------------------READFPERMESRALETAAFIRRELDT-DIICLQEFFVQDEGYTTLFSSSLADAYDFYLHPRPS-KKDGLGVLLRKGKFRLHGARGATLSRWGSRVGLLMDLETLAGATS------EQEGQRIILLSTHLSFPHNRFDENQQHRQVSSLTRMLEAYV--KGCPALGGQRDVLQILCGDFNVDLTNPVLAPIHALGFQHVREEGERGDGADF------VTHRTHRGDDVAVDHIFYRSFNAARHRR 398          
BLAST of mRNA_L-elsbetiae_contig5142.13216.1 vs. uniprot
Match: A0A4D9D791_9STRA (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D791_9STRA)

HSP 1 Score: 159 bits (403), Expect = 2.890e-39
Identity = 102/279 (36.56%), Postives = 148/279 (53.05%), Query Frame = 2
Query:  410 DFRLTTFNLLAPCYKRMHSEAAPVAAIHEAGTGTGLLAMANRVRTQRTARESEFDGVWRERALETVDFIRRDMSSSDIICLQEFWL-DPSYDAIFRSALGEDYDFHTVKRTGGKSDGVAVLLRRGKFDVRSKRGLSLSAVGDRVALVMHLRSLVGGEAGGGDGGQAAGEDLILVNTHLAFPHNALDRVNQMSQIEAVTRTVEGVIGEAGLPPM-----TPRVVVGDLNVEETDPVCRHLGKNGFRSAFASLHR--ERRVITHRNHRGEEVMVDHVFVKA 1222
            D  ++TFN+LAPCYKRM                                RE++F      RA ET  FIRR++ + DIICLQEF++ D  Y  +F S+L + YDF+   R   K DG+ VLL++GKF V   RG +LS  G RV L+M L +L G  +      +  G+ +IL++THL+FPHN  D   Q  Q+ ++TR +E  +   G P +       +++ GD NV+ T+PV   +   GF+       R  E   +THR HRG++V VDH+F ++
Sbjct:  122 DISISTFNILAPCYKRMKDGG----------------------------READFPERMESRAEETAAFIRRELDT-DIICLQEFFMQDEGYTTLFSSSLADAYDFYLHPRPS-KKDGLGVLLKKGKFRVHGARGATLSRWGSRVGLLMDLETLAGATS------EQEGQRIILLSTHLSFPHNRFDENQQHRQVSSLTRMLEAYV--KGCPALGGQRDVLQILCGDFNVDLTNPVLGPIHALGFQHVREEGGRRDEANFVTHRTHRGDDVAVDHIFYRS 362          
BLAST of mRNA_L-elsbetiae_contig5142.13216.1 vs. uniprot
Match: F0WDT8_9STRA (Uncharacterized protein AlNc14C69G4806 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WDT8_9STRA)

HSP 1 Score: 147 bits (371), Expect = 1.540e-36
Identity = 114/345 (33.04%), Postives = 161/345 (46.67%), Query Frame = 2
Query:  419 LTTFNLLAPCYKRMHSEAAPVAAIHEAGTGTGLLAMANRVRTQRTARESEFDGVWRERALETVDFIRRDMSSSDIICLQEFWLDPSYDAIFRSALGEDYDFHTVKRTGGKSDGVAVLLRRGKFDVRSKRGLSLSAVGDRVALVMHLRSLVGGEAGGGDGGQAAGEDLILVNTHLAFPHNALDRVNQMSQIEAVTRTVEGVIGEAGLPPMTPRVVVGDLNVEETDPVCRHLGKNGFRSAFASLHRERRVITHRNHRGEEVMVDHVFVKAPGFAGRRRGTGE------PVAPGAAPEVPGLV-PRLHEDVSVEEALLLPALVD--------TDEWSPHFSLSDHRPL 1408
            L TFN+LAPCY R H                GLL             ES+F+ V+  RA E V FI +     D+ICLQE+W + SY+ IF SA    +  HT+KR G K DG+A+L+ + K D++    +     GDRVA++MHL              +   +  +L+N+HL FPH    +  ++SQI+ V  +V+G + +  L    P ++ GD N +  DPV + +  NG+RS F  +H     ITH NH+  EV VD +F         ++ T +       + P   P+   L  P    D S  E  L   L           D WS    LSDHRPL
Sbjct:   24 LMTFNILAPCYFR-HG---------------GLL-------------ESDFEQVYVTRAQEIVQFIHK--QCCDVICLQEYWFNQSYERIFHSAFQHSHTIHTIKRPGIKQDGLAILVNKQKLDIQFVNPIQ---AGDRVAMMMHLTL------------KQPYQSFLLINSHLTFPHGQEYKEIRLSQIQLVLNSVQGYMEQHNL--QVPVLLCGDFN-DHNDPVHQKVLDNGYRSVFEVVHGREARITHCNHKNREVGVDFIFASGLSTENGKKSTFQLYPLCCDLLPRHLPDTARLKRPSFGHDWSTIECPLEMPLEQCKETHEQLVDYWS---LLSDHRPL 316          
BLAST of mRNA_L-elsbetiae_contig5142.13216.1 vs. uniprot
Match: A0A024G3R7_9STRA (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G3R7_9STRA)

HSP 1 Score: 143 bits (360), Expect = 4.430e-35
Identity = 112/348 (32.18%), Postives = 165/348 (47.41%), Query Frame = 2
Query:  419 LTTFNLLAPCYKRMHSEAAPVAAIHEAGTGTGLLAMANRVRTQRTARESEFDGVWRERALETVDFIRRDMSSSDIICLQEFWLDPSYDAIFRSALGEDYDFHTVKRTGGKSDGVAVLLRRGKFDVRSKRGLSLSAVGDRVALVMHLRSLVGGEAGGGDGGQAAGEDLILVNTHLAFPHNALDRVNQMSQIEAVTRTVEGVIGEAGLPPMTPRVVVGDLNVEETDPVCRHLGKNGFRSAFASLHRERRVITHRNHRGEEVMVDHVFVKAPGFAGRRRGTGEPVAPGAAPEVPGLVP---RL------HEDVSVEEALLLPA---------LVDTDEWSPHFSLSDHRPL 1408
            L TFN+LAPCY R H                GL+             ESE++ ++  RA E V FI++     D+ICLQE+W + SY  IF SA    +  HT+KR G K DG+A+L+ + K  +     +     GDRVA++MHL              +   +  +L+N+HL FPH    +  ++SQI+ V  +++G   +  L  M P ++ GD N +  DPV   + +NG++S F  +H     ITH NH+  EV VD +F    GF       G+ + P     +P  +P   RL      H+  ++E  L +P          LVD   W     +SDHRPL
Sbjct:   19 LMTFNILAPCYFR-HG---------------GLV-------------ESEYEHLYVARAQELVQFIQK--QCCDVICLQEYWFNQSYQNIFHSAFQHSHTIHTIKRPGIKQDGLAILVNKQKLKINFVNPIQ---AGDRVAMMMHLTM------------KPLHQSFLLINSHLTFPHGHEYKQTRLSQIQLVLNSIQGYKDQHNLQEM-PVLLCGDFN-DYNDPVHEKVLENGYQSVFQQIHGREARITHCNHKNREVGVDFIFASGLGF----EKNGQSLIPICCDLLPRHLPDTARLKRPSFGHDWNTIERPLEMPIEQCKESQQRLVDY--WC---LISDHRPL 309          
BLAST of mRNA_L-elsbetiae_contig5142.13216.1 vs. uniprot
Match: F2UKQ3_SALR5 (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UKQ3_SALR5)

HSP 1 Score: 137 bits (346), Expect = 2.930e-32
Identity = 111/385 (28.83%), Postives = 155/385 (40.26%), Query Frame = 2
Query:  359 GEAAAHDACVDGVERGIDFRLTTFNLLAPCYKRMHSEAAPVAAIHEAGTGTGLLAMANRVRTQRTARESEFDGVWRERALETVDFIRRDMSSSDIICLQEFWLDPSYDAIFRSALGEDYDFHTVKRTGGKSDGVAVLLRRGKFDVRSKRGLSLSAVGDRVALVMHLRS-----------LVGGEAG--------------------GGDGGQAAGEDLILVNTHLAFPHNALDRVNQMSQIEAVTRTVEGVIGEAGLPPMTPRVVVGDLNVEETDPVCRHLGKNGFRSAFASLHRERRVITHRNHRGEEVMVDHVFVKAPGFAGRRRGTGEPVAPGAAPEVPGLVPRLHEDVSVEEALLLPALVDTDEWSPHFSLSDHRPLTVRL 1420
            G+A A      G     + R+ TFN+LAPCYKR+ S                         TQ   RES+F  ++R R    +  +R +    D+I LQEFW      +++ +ALG  Y  H ++R  G+ DGV V +R     V   R L     G RVAL++HLR            L+ G                        GDG      DLIL NTH +FPH   +   ++ Q   +  +V+    E G+      V+ GD N       C HL   G+ S F ++H     +THR H+GE+V VD VF+++   A                             + + A  LP L     W   F LSDHRP+ V L
Sbjct:   79 GDAGARAHASKGPATSCELRIATFNVLAPCYKRLPS-------------------------TQ--LRESDFPSLYRPRNAAILRMLR-EQRDLDVIALQEFWFHHDVQSMYMAALGSGYHVHCLQRPKGRDDGVVVFVRN-HIQVVGTRRLHFDDSGMRVALLLHLRVRGSTPTPIAPYLIRGTHAEALDNTNDADIAAVPHQPCPAGDGSV----DLILANTHFSFPHTQQEHEARLQQARVLATSVQDFAREQGV---GTSVLTGDFNGNVNSRSCAHLISCGYESLFHAVHDRELSVTHRTHKGEDVGVDFVFMRSDDGA----------------------------FTSDAAYALPQLYPDQAWPEDFDLSDHRPVVVSL 399          
BLAST of mRNA_L-elsbetiae_contig5142.13216.1 vs. uniprot
Match: A0A7S0BHX9_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BHX9_9RHOD)

HSP 1 Score: 129 bits (325), Expect = 8.660e-32
Identity = 71/182 (39.01%), Postives = 105/182 (57.69%), Query Frame = 2
Query:  419 LTTFNLLAPCYKRMHSEAAPVAAIHEAGTGTGLLAMANRVRTQRTARESEFDGVWRERALETVDFIRRDMSSSDIICLQEFWLDPSYDAIFRSALGEDYDFHTVKRTGGKSDGVAVLLRRGKFDVRSKRGLSLSAVGDRVALVMHLRSLVGGEAGGGDGGQAAGEDLILVNTHLAFPHNALD 964
            + TFN+LAPCY+R+   +A +    E+   +G      ++R++  ARES+F  +W  R  E   F++ D+   D++CLQEFW D  Y + F     EDY+   V+RTGGK+DG+  +LRRGKF+V   + L    VG+RVAL++ +R               AG  +I+VNTHL FPH+  D
Sbjct:    8 VATFNVLAPCYRRLDELSAKLPVTEESRLTSG------KIRSRPRARESQFRDLWSARCSEMCAFVKADVF--DVVCLQEFWFDEGYVSKFSDCFSEDYELFFVQRTGGKADGLVTMLRRGKFNVEHTQKLEFKDVGNRVALLLCVRLA------------DAGSLVIIVNTHLTFPHHEHD 169          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5142.13216.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KYQ9_9PHAE3.180e-19372.60Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A835ZAD2_9STRA2.900e-8041.76Endonuclease/exonuclease/phosphatase n=1 Tax=Tribo... [more]
A0A7S3A7G3_9RHOD1.210e-5334.60Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A482S2T6_9ARCH3.170e-4038.27Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
W7U4G6_9STRA6.190e-4036.18Calcium-binding endonuclease exonuclease phosphata... [more]
A0A4D9D791_9STRA2.890e-3936.56Endo/exonuclease/phosphatase domain-containing pro... [more]
F0WDT8_9STRA1.540e-3633.04Uncharacterized protein AlNc14C69G4806 n=1 Tax=Alb... [more]
A0A024G3R7_9STRA4.430e-3532.18Endo/exonuclease/phosphatase domain-containing pro... [more]
F2UKQ3_SALR52.930e-3228.83Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A7S0BHX9_9RHOD8.660e-3239.01Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5142contigL-elsbetiae_contig5142:128..4467 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score552.4
Seed ortholog evalue2e-154
Seed eggNOG ortholog2880.D7FL44
KEGG rclassRC00032
KEGG koko:K01662,ko:K18729,ko:K19612
KEGG ReactionR05636
KEGG Pathwayko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130
KEGG ModuleM00096
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Endonuclease/Exonuclease/phosphatase family
EggNOG OGsCOG5239@1,KOG2338@2759
EC2.2.1.7,3.1.13.4
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03019,ko03029
Exons4
Model size1498
Cds size1377
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5142.13216.1prot_L-elsbetiae_contig5142.13216.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5142 188..4406 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816525.8000712-UTR-L-elsbetiae_contig5142:127..1871622816525.8000712-UTR-L-elsbetiae_contig5142:127..187Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5142 128..187 -
1691683623.0693345-UTR-L-elsbetiae_contig5142:127..1871691683623.0693345-UTR-L-elsbetiae_contig5142:127..187Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5142 128..187 -
1622816525.8666584-UTR-L-elsbetiae_contig5142:4406..44671622816525.8666584-UTR-L-elsbetiae_contig5142:4406..4467Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5142 4407..4467 -
1691683623.1144376-UTR-L-elsbetiae_contig5142:4406..44671691683623.1144376-UTR-L-elsbetiae_contig5142:4406..4467Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5142 4407..4467 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816525.8144102-CDS-L-elsbetiae_contig5142:187..4331622816525.8144102-CDS-L-elsbetiae_contig5142:187..433Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5142 188..433 -
1691683623.080374-CDS-L-elsbetiae_contig5142:187..4331691683623.080374-CDS-L-elsbetiae_contig5142:187..433Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5142 188..433 -
1622816525.8278272-CDS-L-elsbetiae_contig5142:1033..16211622816525.8278272-CDS-L-elsbetiae_contig5142:1033..1621Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5142 1034..1621 -
1691683623.0890265-CDS-L-elsbetiae_contig5142:1033..16211691683623.0890265-CDS-L-elsbetiae_contig5142:1033..1621Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5142 1034..1621 -
1622816525.8460019-CDS-L-elsbetiae_contig5142:2405..27141622816525.8460019-CDS-L-elsbetiae_contig5142:2405..2714Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5142 2406..2714 -
1691683623.0975285-CDS-L-elsbetiae_contig5142:2405..27141691683623.0975285-CDS-L-elsbetiae_contig5142:2405..2714Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5142 2406..2714 -
1622816525.856425-CDS-L-elsbetiae_contig5142:4172..44061622816525.856425-CDS-L-elsbetiae_contig5142:4172..4406Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5142 4173..4406 -
1691683623.1059265-CDS-L-elsbetiae_contig5142:4172..44061691683623.1059265-CDS-L-elsbetiae_contig5142:4172..4406Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5142 4173..4406 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5142.13216.1

>prot_L-elsbetiae_contig5142.13216.1 ID=prot_L-elsbetiae_contig5142.13216.1|Name=mRNA_L-elsbetiae_contig5142.13216.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=459bp
MTNAFVPQTSWRGSLGPPSLLHQTTSSSALPNTNSQRGAAARGSRMVLGE
APSAACRRALQRAWQASSKEATTHERLEQQQQQQQDPLASTTTAAAAAAG
EAAAHDACVDGVERGIDFRLTTFNLLAPCYKRMHSEAAPVAAIHEAGTGT
GLLAMANRVRTQRTARESEFDGVWRERALETVDFIRRDMSSSDIICLQEF
WLDPSYDAIFRSALGEDYDFHTVKRTGGKSDGVAVLLRRGKFDVRSKRGL
SLSAVGDRVALVMHLRSLVGGEAGGGDGGQAAGEDLILVNTHLAFPHNAL
DRVNQMSQIEAVTRTVEGVIGEAGLPPMTPRVVVGDLNVEETDPVCRHLG
KNGFRSAFASLHRERRVITHRNHRGEEVMVDHVFVKAPGFAGRRRGTGEP
VAPGAAPEVPGLVPRLHEDVSVEEALLLPALVDTDEWSPHFSLSDHRPLT
VRLKFPAE*
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mRNA from alignment at L-elsbetiae_contig5142:128..4467-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5142.13216.1 ID=mRNA_L-elsbetiae_contig5142.13216.1|Name=mRNA_L-elsbetiae_contig5142.13216.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4340bp|location=Sequence derived from alignment at L-elsbetiae_contig5142:128..4467- (Laminarionema elsbetiae ELsaHSoW15)
AGGGGGGTTAGAGGCTGGTTTCGGGCAGCTCCTTCCTGTGGCCGCCGTTG CACTCTGCAGCATGACGAACGCTTTTGTACCGCAAACTTCCTGGCGTGGT TCCTTAGGACCACCATCACTGCTGCATCAGACCACTTCGTCTTCAGCCCT CCCAAACACCAACTCGCAGCGAGGAGCGGCAGCTAGAGGGAGCAGAATGG TTCTGGGAGAGGCGCCCTCAGCGGCTTGCAGGCGAGCTCTGCAGCGAGCT TGGCAGGCCAGCTCCAAGGAGGCGACAACCCACGAGCGTCTCGAGGTGAG CCGGTTTGATTTGGTTTCCACAAAACGAAAGAAGATTTTTGACTCAACCC CCGAACCAAAAGATGCTGCAGGTCTCGCTTGGGGGCGCGTCGACACGAAA TCATTCCTGTACAGTGGCTTAGCACTCCCGGTGAATGTGTCGCGGTCTAC GTCGGCGGTAGCGTGGCTCGTGCGGCACGCGCGAGACGCCGTGGGTGTGT CTCCTTACAGTTCCGGCCGAAAAAACAGAAGGTTTTGTGCATACGTACCC CTCCAAAAAAAAATCCGAGTGATCGATGGCCTCGCTATTGTAGGTGTTGG GCTCCACCGCCGACTGGACTTACTCTGACGCTGAGGGAAGCAGGCGGGGC GTGACTACTCTCGATGCGCATCCACCCCATGCTGGCTCCCCTCCCGGGCT TGACGTGTTTAACTTGATATATTTTGCAAGCACGGCCCACTTCGGGCAGA CGAACATACTGCAATTGCACACCAGTTGCACACACAGCACACAGTTAGGT AGCTCGATCAAGAGCCGTTTTTTCACACGCTCTTTTTTTTTTAATTAATG CATACAAATGTCAGCAGCCTACGTCCAGTCTGTGAAAAAGTCGTTCCAGA GGGAACTGTTGTAGGCATACTAACCCCCTTATTTCCGTCCACCAAGACAT ACTCGCACACAATCCGTAATCCATTTACTGTATACACAGTTCGTTGGTGA AAAATTGATTTCGAACATTTTTTTGCAGTCGAGAGCTCCCTAGTGTGAAA AAAAGGCGTGCATCGAAAGGAACACCTGCTGTGCCCTTACTGTCGTGCCT CCTCAGAGTTACCATATATGTGTGCGTTTTGTTATTCCGTCCCATCGGCC GAGTTTCTGCGGTCGAGATCTCTTCACGGTACAAGTACCTTTGGAGATGT CTTCATGGTACAACAACAGTAGTACCTTGCTCGGTTACAATCTGCCATCT ACTAATGTACCCGAGATCTGAGACAACCACGTGCCATCATATGTAGGTAT GTAGAAGTATGTTTATGTGTCGTTTTTCTCATGTGGCCTTGGAAAACCCG GATTGCACCCAGAGTGTTCATGCGTGTACTCTCGTTCGAGGATCCGGTGG AAGCATGAAAAATCTACAAGACCCCCGAACAGACTTGAGAGTGGACGCAC GTTGTCAACAACAGCACTCGGCCGCCGTTGTGTTTAACCCTTGCCTCAAA GAACCTTTCAGCCGTCGGCGGTATACATATCTACTCGCACAATATAAAAC ATTTTTTGGGTTACAACAGTACGCAGCAGGAACACGCTGTGTGTGATCCA GCGGGTGATCCGTTGTTTCCGGATTGCAGTTCTGAGTTTTCCACGTCGGA CCTGAAACCGAAATCCACCTCGCCACAACTGCTGTATCCGCCATCTATTT AGACTAACCGGCAAATCATGACCCTCTCCATGCTCTCTTGTCGATCATAG CAGCAGCAGCAGCAGCAGCAGCAAGACCCACTAGCATCAACAACAACAGC AGCAGCGGCAGCAGCAGGGGAGGCAGCAGCGCACGACGCGTGCGTGGACG GCGTGGAGCGAGGGATAGACTTCCGATTAACCACCTTCAACCTCCTGGCG CCGTGCTACAAGCGGATGCACTCGGAGGCTGCGCCCGTCGCGGCCATCCA CGAAGCCGGCACCGGCACGGGACTGTTGGCGATGGCGAATCGCGTCAGGA CCCAGCGCACGGCGAGGGAGAGCGAGTTCGACGGCGTCTGGAGAGAGCGC GCTCTCGAAACGGTGAGACCTGGTCCCACACGCCGCGTGCGCCTTTGTTC TATTATTCGACCCGCGCTGGTGTCTCCCGTGTCGGCGTCGTGGTGTTATC TCTCGCCATCACCTGCAACGCAGGTCAGGTTGCGCGCTACATACACGTAG ACAGGAGCAGGGTGAGGCCACACCTCACTCACCAAGACATACGTATGTGT GGAAACCAGCTAATGAGGACATGTAGTTGTCGGGTTGCCTTTGACTTGGT CGTGCTCAAACTGTACGGGAACAGCAGTGCATACGTGAGGTTCATGCATA CAAACCCCGTGGGTACTCGATGGCGCCTTCCGGCCGACCGCGGTAGGGAG CTTCGCTCGCCTGCCTCGCACATGTGTCGGATGTCAAACCTGCATACATA CACTTCCAACAGGTAGCCTTTTTTTCAATTTTTGAGTGTCCTAGGAGTCG CTCACGCCTCTGCTACATATACGTCCCCTTCTTGAGGGTGCCATCTCAGG CCCCTTTCTTCGACTTGGCCTTTGCGGCTCGGCCAACGAAACGATAAACA AGAAAACGAAACGATACATAGGCATGAAACAGAGCCTGTTTTTCCGGCAC CAAGGTCCAACGCCCGCCCCTTTTTTTGTTGGATGGGTTTCCCGCTCCGC ACGTTATTGCTTCAACACTGCTGCGACAAGTTTTTCTACAACTAGAACAT CAGTTCTTAGAGCCCCCCACAAGTATCGCAAAAACGTGACTCTGACCCCC CTCTCTTCTCCCCGCGGAACCCCTCCCACGCCGACCAACCTCTCAGGTGG ACTTTATCCGCAGAGACATGTCTTCGTCGGACATCATCTGCCTGCAGGAG TTCTGGCTGGACCCTTCCTACGACGCCATCTTCCGCTCGGCGCTCGGGGA GGACTACGACTTCCACACCGTCAAGCGGACGGGCGGCAAGTCGGACGGCG TGGCCGTGCTCCTGCGCCGCGGCAAGTTCGACGTCCGCTCCAAGCGGGGC CTCTCCCTCTCCGCCGTCGGGGACAGGGTGGCCCTCGTCATGCACCTCCG CTCGCTGGTCGGGGGAGAAGCAGGAGGTGGGGATGGTGGCCAGGCTGCCG GCGAAGACCTGATCCTCGTGAACACCCACCTCGCCTTCCCGCACAACGCG CTTGACCGGGTGAACCAGATGTCGCAGATCGAGGCCGTGACGCGCACCGT GGAGGGCGTCATCGGGGAGGCGGGGCTGCCGCCCATGACGCCCCGCGTGG TGGTCGGCGACCTGAACGTGGAGGAGACGGACCCCGTCTGCCGCCACCTC GGGAAGAACGGCTTCCGGAGCGCGTTCGCGTCGCTCCACAGGGAGCGGCG GGTCATCACGCACCGGAACCACCGGGGCGAAGAGGTGAGCACGCCGTGCG GGCAGAAAAGGTCCCCCATCTTGTAGTAAATAGTAATGTCTGTTGTACAT AAGTAGCAAAGATGCCGAAATGACCGCAGTTTGGAGCCGGTAACCATGTA CTGTCCGCCGGTGACGAGATTTCTACATTGGTTTCAGCATAAACGTGGCA GGAAGCCTCGTGACGGCCCGTTTTTGTGACCTTCTTTTGGCATCTTTGGT ATGGTAGTATTTAAGGTGTCTCCTGTTTTTGTTTTCGTCGTTTTTTCCGT CCTGACTTTTTTCTTTTTTCAGAGGATATTTTTTTTTCCATGGGGGCTCT CGCTGAGCGAAGCGGAGGGAGCATCTCCCTCCCTCGGCAGTATTTACTGC TGCTGGCCGCTGTGCCCCCTATGCCCTGTACCAACGGGCTGTGTATGATC GGTTGTTTCGTGCTCACGTGTCCTCAGCACGCACGTGCCAACTTTATTCA ACACAATTGTTTTGTGCAAGTATCTACACATATGCGTATTGTATCTACTT CGAAAAGTATGTACATCTCTTCCTATTTTTTATCTAACCGCACCTCCGCC CGCCCCCGCCCTCGCCCCCCCCCCCTTTGCCCAGGTGATGGTCGATCACG TGTTCGTGAAGGCGCCGGGCTTTGCCGGTCGCCGAAGAGGAACGGGAGAG CCAGTCGCCCCGGGGGCAGCCCCCGAGGTACCCGGGCTCGTTCCCCGCCT GCACGAAGATGTGTCGGTGGAAGAAGCCCTGCTGCTGCCGGCGCTGGTGG ACACTGACGAGTGGAGCCCGCACTTTTCCTTGTCGGACCACCGGCCGCTC ACGGTTCGTCTCAAGTTCCCCGCGGAATGAAGGAGGCGGATTTGAATTTT AGGAAAGGGAGCAGCTCAAAAATGATCACAGAAGGTGGGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig5142:128..4467-

>mRNA_L-elsbetiae_contig5142.13216.1 ID=mRNA_L-elsbetiae_contig5142.13216.1|Name=mRNA_L-elsbetiae_contig5142.13216.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2754bp|location=Sequence derived from alignment at L-elsbetiae_contig5142:128..4467- (Laminarionema elsbetiae ELsaHSoW15)
ATGACGAACGCTTTTGTACCGCAAACTTCCTGGCGTGGTTCCTTAGGACC
ACCATCACTGCTGCATCAGACCACTTCGTCTTCAGCCCTCCCAAACACCA
ACTCGCAGCGAGGAGCGGCAGCTAGAGGGAGCAGAATGGTTCTGGGAGAG
GCGCCCTCAGCGGCTTGCAGGCGAGCTCTGCAGCGAGCTTGGCAGGCCAG
CTCCAAGGAGGCGACAACCCACGAGCGTCTCGAGATGACGAACGCTTTTG
TACCGCAAACTTCCTGGCGTGGTTCCTTAGGACCACCATCACTGCTGCAT
CAGACCACTTCGTCTTCAGCCCTCCCAAACACCAACTCGCAGCGAGGAGC
GGCAGCTAGAGGGAGCAGAATGGTTCTGGGAGAGGCGCCCTCAGCGGCTT
GCAGGCGAGCTCTGCAGCGAGCTTGGCAGGCCAGCTCCAAGGAGGCGACA
ACCCACGAGCGTCTCGAGCAGCAGCAGCAGCAGCAGCAAGACCCACTAGC
ATCAACAACAACAGCAGCAGCGGCAGCAGCAGGGGAGGCAGCAGCGCACG
ACGCGTGCGTGGACGGCGTGGAGCGAGGGATAGACTTCCGATTAACCACC
TTCAACCTCCTGGCGCCGTGCTACAAGCGGATGCACTCGGAGGCTGCGCC
CGTCGCGGCCATCCACGAAGCCGGCACCGGCACGGGACTGTTGGCGATGG
CGAATCGCGTCAGGACCCAGCGCACGGCGAGGGAGAGCGAGTTCGACGGC
GTCTGGAGAGAGCGCGCTCTCGAAACGCAGCAGCAGCAGCAGCAGCAAGA
CCCACTAGCATCAACAACAACAGCAGCAGCGGCAGCAGCAGGGGAGGCAG
CAGCGCACGACGCGTGCGTGGACGGCGTGGAGCGAGGGATAGACTTCCGA
TTAACCACCTTCAACCTCCTGGCGCCGTGCTACAAGCGGATGCACTCGGA
GGCTGCGCCCGTCGCGGCCATCCACGAAGCCGGCACCGGCACGGGACTGT
TGGCGATGGCGAATCGCGTCAGGACCCAGCGCACGGCGAGGGAGAGCGAG
TTCGACGGCGTCTGGAGAGAGCGCGCTCTCGAAACGGTGGACTTTATCCG
CAGAGACATGTCTTCGTCGGACATCATCTGCCTGCAGGAGTTCTGGCTGG
ACCCTTCCTACGACGCCATCTTCCGCTCGGCGCTCGGGGAGGACTACGAC
TTCCACACCGTCAAGCGGACGGGCGGCAAGTCGGACGGCGTGGCCGTGCT
CCTGCGCCGCGGCAAGTTCGACGTCCGCTCCAAGCGGGGCCTCTCCCTCT
CCGCCGTCGGGGACAGGGTGGCCCTCGTCATGCACCTCCGCTCGCTGGTC
GGGGGAGAAGCAGGAGGTGGGGATGGTGGCCAGGCTGCCGGCGAAGACCT
GATCCTCGTGAACACCCACCTCGCCTTCCCGCACAACGCGCTTGACCGGG
TGAACCAGATGTCGCAGATCGAGGCCGTGACGCGCACCGTGGAGGGCGTC
ATCGGGGAGGCGGGGCTGCCGCCCATGACGCCCCGCGTGGTGGTCGGCGA
CCTGAACGTGGAGGAGACGGACCCCGTCTGCCGCCACCTCGGGAAGAACG
GCTTCCGGAGCGCGTTCGCGTCGCTCCACAGGGAGCGGCGGGTCATCACG
CACCGGAACCACCGGGGCGAAGAGGTGGACTTTATCCGCAGAGACATGTC
TTCGTCGGACATCATCTGCCTGCAGGAGTTCTGGCTGGACCCTTCCTACG
ACGCCATCTTCCGCTCGGCGCTCGGGGAGGACTACGACTTCCACACCGTC
AAGCGGACGGGCGGCAAGTCGGACGGCGTGGCCGTGCTCCTGCGCCGCGG
CAAGTTCGACGTCCGCTCCAAGCGGGGCCTCTCCCTCTCCGCCGTCGGGG
ACAGGGTGGCCCTCGTCATGCACCTCCGCTCGCTGGTCGGGGGAGAAGCA
GGAGGTGGGGATGGTGGCCAGGCTGCCGGCGAAGACCTGATCCTCGTGAA
CACCCACCTCGCCTTCCCGCACAACGCGCTTGACCGGGTGAACCAGATGT
CGCAGATCGAGGCCGTGACGCGCACCGTGGAGGGCGTCATCGGGGAGGCG
GGGCTGCCGCCCATGACGCCCCGCGTGGTGGTCGGCGACCTGAACGTGGA
GGAGACGGACCCCGTCTGCCGCCACCTCGGGAAGAACGGCTTCCGGAGCG
CGTTCGCGTCGCTCCACAGGGAGCGGCGGGTCATCACGCACCGGAACCAC
CGGGGCGAAGAGGTGATGGTCGATCACGTGTTCGTGAAGGCGCCGGGCTT
TGCCGGTCGCCGAAGAGGAACGGGAGAGCCAGTCGCCCCGGGGGCAGCCC
CCGAGGTACCCGGGCTCGTTCCCCGCCTGCACGAAGATGTGTCGGTGGAA
GAAGCCCTGCTGCTGCCGGCGCTGGTGGACACTGACGAGTGGAGCCCGCA
CTTTTCCTTGTCGGACCACCGGCCGCTCACGGTTCGTCTCAAGTTCCCCG
CGGAATGAGTGATGGTCGATCACGTGTTCGTGAAGGCGCCGGGCTTTGCC
GGTCGCCGAAGAGGAACGGGAGAGCCAGTCGCCCCGGGGGCAGCCCCCGA
GGTACCCGGGCTCGTTCCCCGCCTGCACGAAGATGTGTCGGTGGAAGAAG
CCCTGCTGCTGCCGGCGCTGGTGGACACTGACGAGTGGAGCCCGCACTTT
TCCTTGTCGGACCACCGGCCGCTCACGGTTCGTCTCAAGTTCCCCGCGGA
ATGA
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