prot_L-elsbetiae_contig514.13210.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig514.13210.1
Unique Nameprot_L-elsbetiae_contig514.13210.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length431
Homology
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BLAST of mRNA_L-elsbetiae_contig514.13210.1 vs. uniprot
Match: A0A6H5KU66_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU66_9PHAE)

HSP 1 Score: 133 bits (334), Expect = 5.920e-30
Identity = 79/138 (57.25%), Postives = 92/138 (66.67%), Query Frame = 0 
Query:    6 GPARCALLMASATFIEEVVGMKRFPRMKALRCFSASLRCGK--SPGGNDLADI-------GGSGSSSKHQL------AAPPAPFELEE-VLRPQGPVVDAEAMPASESPGGMRLEDLLAIAGDDPPGALLVDSKWRTC 127
            G ARCAL MASATF+EEV+GM  FPRMKA+RCFSASLRCG+     G+ LA           S SSSK         A  PAPF +++ V+R QG  +D  A   +ESPGGMR EDLLAIAG+DP GA LVD+KWRTC
Sbjct:  579 GAARCALAMASATFLEEVMGMGGFPRMKAMRCFSASLRCGRPRDAAGDYLAPSIVCARSNSSSSSSSKGSCRGKRTSARDPAPFSVDDGVVRLQGTRLDGAAAAVAESPGGMRFEDLLAIAGNDPSGARLVDTKWRTC 716
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BLAST of mRNA_L-elsbetiae_contig514.13210.1 vs. uniprot
Match: D8LPV5_ECTSI (Disulfide-isomerase A6 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPV5_ECTSI)

HSP 1 Score: 103 bits (257), Expect = 6.450e-22
Identity = 59/85 (69.41%), Postives = 69/85 (81.18%), Query Frame = 0 
Query:  347 QSRRSAGLSTTGPRAPRARQEPPPEPAAARLASMMSLLPGVHGSGLSDAPGTAAMGAVVALVDPAKAEGVLRAIRTRGTVATGIA 431
            Q  RSAGLS TG R     ++ PPEPAA RLASMMSLLPGVHGSG+S+   + AMGAVVA+VDPA+AEG+LRAI+TRG VATG+A
Sbjct:  127 QGPRSAGLSATGSRV----RQKPPEPAALRLASMMSLLPGVHGSGISEGSESGAMGAVVAVVDPARAEGILRAIKTRGKVATGVA 207
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig514.13210.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KU66_9PHAE5.920e-3057.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LPV5_ECTSI6.450e-2269.41Disulfide-isomerase A6 n=1 Tax=Ectocarpus siliculo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036554GHMP kinase, C-terminal domain superfamilyGENE3D3.30.70.890coord: 305..430
e-value: 2.4E-6
score: 29.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig514contigL-elsbetiae_contig514:25895..31629 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig514.13210.1mRNA_L-elsbetiae_contig514.13210.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig514 25894..31629 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig514.13210.1 ID=prot_L-elsbetiae_contig514.13210.1|Name=mRNA_L-elsbetiae_contig514.13210.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=431bp
GYGWAGPARCALLMASATFIEEVVGMKRFPRMKALRCFSASLRCGKSPGG
NDLADIGGSGSSSKHQLAAPPAPFELEEVLRPQGPVVDAEAMPASESPGG
MRLEDLLAIAGDDPPGALLVDSKWRTCCHWPMLGPGGIGLAVVIAQPLSL
ETARRLQSQAEQERWRGSATCRAVLGVARERHPDAQFLRDVPPETLDALV
SVSTGRGQQKGAAVAATVAAAAAAATAWSGGAPAAASAAGGAAPLHQSAG
GGMTAAEGWTSPVLGLTPSASASSLSATASQGRAFLSENGAAAGGGGIAG
GGFGGRRLSPEVLAHARHLAADTQRVAEVTIALATGDMETVGRLMMQSRR
SAGLSTTGPRAPRARQEPPPEPAAARLASMMSLLPGVHGSGLSDAPGTAA
MGAVVALVDPAKAEGVLRAIRTRGTVATGIA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036554GHMP_kinase_C_sf