mRNA_L-elsbetiae_contig5092.13133.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5092.13133.1 vs. uniprot
Match: D7FI75_ECTSI (Ubiquitinyl hydrolase 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI75_ECTSI) HSP 1 Score: 238 bits (606), Expect = 5.180e-76 Identity = 112/139 (80.58%), Postives = 128/139 (92.09%), Query Frame = 1 Query: 1 MYHERQHLMHCAMHALNNLFQEAWADRTLMERLALELCDRDAAQRSESGTRRMLINPFKSVVPLVGDYDISVVIEALKLRECRVSLHVVFNPRDPSAFELALAEVDWESASIVGIIVNFVCRNLLWGAWVTHHFYAIVK 417 MYHERQ LM CAMHALNNLFQE WA+R LMERLALEL +R+A RSESG RR+LINP+KSV+P+VGDYDI+VV+EALKLRECRVSLHVVFN +DP+AFELALA VDW+SA+I G+IVNFVCR+LLWG+WVTHHFYAIVK Sbjct: 1 MYHERQRLMQCAMHALNNLFQEPWANRELMERLALELGNREATLRSESGLRRLLINPYKSVIPMVGDYDINVVLEALKLRECRVSLHVVFNAKDPTAFELALARVDWDSATIRGVIVNFVCRSLLWGSWVTHHFYAIVK 139
BLAST of mRNA_L-elsbetiae_contig5092.13133.1 vs. uniprot
Match: A0A6H5K9J2_9PHAE (Ubiquitinyl hydrolase 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9J2_9PHAE) HSP 1 Score: 165 bits (418), Expect = 1.500e-48 Identity = 77/138 (55.80%), Postives = 104/138 (75.36%), Query Frame = 1 Query: 1 MYHERQHLMHCAMHALNNLFQEAWADRTLMERLALELCDRDAAQRSESGTRRMLINPFKSVVPLVGDYDISVVIEALKLRECRVSLHVVFNPRDPSAFELALAEVDWESASIVGIIVNFVCRNLLWGAWVTHHFYAIV 414 M+HE+Q+LMHCA+H LNNLFQE+WA +LME +A EL +R+A R ESG RM +NP+KSVVP VG YDI+ ++EAL L++C VSLH VFNP++P+A +L +D + GI+VN V ++LL G + THHFYAI+ Sbjct: 6 MFHEKQYLMHCAVHTLNNLFQESWATASLMEDIAKELFNREATMRKESGMGRMWVNPYKSVVPQVGYYDINCLLEALNLKKCHVSLHAVFNPKEPNAVAKSLEHLDPSLGGVRGIVVNRVSKSLLGGLYTTHHFYAII 143
BLAST of mRNA_L-elsbetiae_contig5092.13133.1 vs. uniprot
Match: D8LDY3_ECTSI (Ubiquitinyl hydrolase 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDY3_ECTSI) HSP 1 Score: 103 bits (257), Expect = 5.090e-25 Identity = 46/87 (52.87%), Postives = 65/87 (74.71%), Query Frame = 1 Query: 154 RMLINPFKSVVPLVGDYDISVVIEALKLRECRVSLHVVFNPRDPSAFELALAEVDWESASIVGIIVNFVCRNLLWGAWVTHHFYAIV 414 RM +NP+KSVVP VG YDI+ ++EALKL++C +SLH VFNP++P+A +L +D + GI+VN V ++LL G + THHFYAI+ Sbjct: 3 RMWVNPYKSVVPQVGYYDINCLLEALKLKKCHISLHAVFNPKEPNAVAKSLEHLDPSLGGVRGIVVNRVSKSLLGGLYTTHHFYAII 89
BLAST of mRNA_L-elsbetiae_contig5092.13133.1 vs. uniprot
Match: A0A836CAV1_9STRA (Ubiquitinyl hydrolase 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAV1_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 1.600e-14 Identity = 45/107 (42.06%), Postives = 62/107 (57.94%), Query Frame = 1 Query: 106 ELCDR---DAAQRSESGTRRMLINPFKSVVPLVGDYDISVVIEALKLRECRVSLHVVFNPRDPSAFELALAEVDWESASIVGIIVNFVCRNLLWGAWVTHHFYAIVK 417 +LC R ++A R SG + +NPFKS VP +G YD+SV++EAL+ R RVS HV +NP P L EVD E VG+I+N CR+ W H+ A+ + Sbjct: 7 KLCCRFAKESALRKASGLSTLWVNPFKSAVPFLGYYDLSVLVEALQTRGVRVSAHVAWNPAHPDLCAQELTEVDLEHC--VGLIIN--CRDPSM-VWRPRHWLAVAR 108
BLAST of mRNA_L-elsbetiae_contig5092.13133.1 vs. uniprot
Match: W7TJE7_9STRA (Ubiquitinyl hydrolase 1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TJE7_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 9.950e-12 Identity = 56/169 (33.14%), Postives = 79/169 (46.75%), Query Frame = 1 Query: 4 YHERQHLMHCAMHALNNLFQEAWADRTLMERLALELCDRDAAQRS--------ESGTRRMLINPF-----KSVVPLVGDYDISVVIEALKLRECRVSLHVVFNPR---DPSAFELALAEV----------DWESASIVGIIVNFVCRNLLWGA-WVTH--HFYAIVKGP 423 YHE Q + C H LNNL+Q W D M+ LA L D A ES RR +PF +S VP +G YD+SV++EALK+R R +HV+ N R D + + L+ V + +G+I+N R W A W+ H+ A++ P Sbjct: 22 YHETQRRLCCGTHTLNNLYQHHWIDTATMDHLASSLGAADKASSGQHKGSGWLESALRRAS-DPFAPTAYRSWVPGLGGYDVSVLVEALKMRNARFDMHVLKNGRLEEDLAVLHVRLSGVAGRGPGATEDEGRGERAIGVILNRKSRT--WAARWLLEGRHWLALIPWP 187
BLAST of mRNA_L-elsbetiae_contig5092.13133.1 vs. uniprot
Match: A0A8J6BYI7_ZIZPA (Ubiquitinyl hydrolase 1 n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J6BYI7_ZIZPA) HSP 1 Score: 64.7 bits (156), Expect = 7.860e-10 Identity = 44/138 (31.88%), Postives = 70/138 (50.72%), Query Frame = 1 Query: 1 MYHERQHLMHCAMHALNNLFQEAWA-DRTLMERLALELCDRDAAQRSESGTRRMLINPFKSVVPLVGDYDISVVIEALKLRECRVSLHVVFNPRDPSAFELALAEVDWESASIVGIIVNFVCRNLLWGAWVTHHFYAI 411 +YHERQ L C +HALNNL QE + R ++ +A L D + T ++ P +V G+YD++V+I AL+ R +V H + +D ++A++VG+++N R L G W H+ AI Sbjct: 29 VYHERQRLQFCLLHALNNLMQEKGSFTRAELDGIAENLVRTDP--NKDQWTPSLIFKPHHNV--FTGNYDVNVLITALEARNKKVVWH---------DHRKGASSIDLDAAALVGLMINVPVRRL-GGLWTGRHWVAI 152
BLAST of mRNA_L-elsbetiae_contig5092.13133.1 vs. uniprot
Match: A0A835HGM3_9MAGN (Ubiquitinyl hydrolase 1 n=1 Tax=Coptis chinensis TaxID=261450 RepID=A0A835HGM3_9MAGN) HSP 1 Score: 63.2 bits (152), Expect = 2.300e-9 Identity = 44/140 (31.43%), Postives = 70/140 (50.00%), Query Frame = 1 Query: 1 MYHERQHLMHCAMHALNNLFQEAWA-DRTLMERLALELCDRDAAQRSESGTRRMLINPFKSVVPLVGDYDISVVIEALKLRECRVSLHVVFNPRDPSAFELALAEVDWESASIVGIIVNFVCRNLLWGAWVTHHFYAIVK 417 +YHE+Q L C +HALNNL+QE +T + +A EL D ++S++ + S L G+YDI+V+I AL+ + +V H NP F D S ++G ++N + G W + H+ A+ K Sbjct: 8 IYHEKQKLQFCLLHALNNLYQEKNVFTKTDLNTIANELIHEDPVKKSQNNWIPIFKPHHNS---LTGNYDINVLISALESKGKKVVWHDRRNPASSINFN------DGNSNKLMGFVINVTLKRF-GGLWRSRHWVAVRK 137
BLAST of mRNA_L-elsbetiae_contig5092.13133.1 vs. uniprot
Match: B0WMV4_CULQU (Ubiquitinyl hydrolase 1 n=5 Tax=Culex TaxID=53527 RepID=B0WMV4_CULQU) HSP 1 Score: 62.0 bits (149), Expect = 7.070e-9 Identity = 44/120 (36.67%), Postives = 69/120 (57.50%), Query Frame = 1 Query: 1 MYHERQHLMHCAMHALNNLFQEAWA-DRTLMERLALELCDRDAAQRSESGTRRMLINPFKSVVPLVGDYDISVVIEALKLRECRVSLHVVFNPR-DPSAFELALAEVDWESASIVGIIVN 354 +YHERQ CA+HALNNLFQ+A + ++T ++ + EL D INP +S++ L G+YDI+V+I AL +++C + F+ R DPS + ++ IVG+I+N Sbjct: 6 IYHERQVKELCALHALNNLFQDASSFNKTQLDEICRELSPND------------FINPHRSILGL-GNYDINVIITALHVKQCEA---IWFDKRRDPSCID---------TSKIVGLILN 100
BLAST of mRNA_L-elsbetiae_contig5092.13133.1 vs. uniprot
Match: A0A6G1DN15_9ORYZ (Ubiquitinyl hydrolase 1 n=1 Tax=Oryza meyeriana var. granulata TaxID=110450 RepID=A0A6G1DN15_9ORYZ) HSP 1 Score: 61.6 bits (148), Expect = 1.240e-8 Identity = 43/138 (31.16%), Postives = 69/138 (50.00%), Query Frame = 1 Query: 1 MYHERQHLMHCAMHALNNLFQEAWA-DRTLMERLALELCDRDAAQRSESGTRRMLINPFKSVVPLVGDYDISVVIEALKLRECRVSLHVVFNPRDPSAFELALAEVDWESASIVGIIVNFVCRNLLWGAWVTHHFYAI 411 +YHERQ L C +HALNNL QE A R ++ +A L D + + ++ P +V G+YD++V+I AL+ R+ +V H + +D ++ + VG+++N R L G W H+ AI Sbjct: 36 VYHERQRLQFCLLHALNNLMQEKEAFTRAELDGIAENLVHADP-NKEQWTPLSLIFKPHHNV--FTGNYDVNVLITALETRKKKVFWH---------DHRKGASSIDLDAEAFVGLMINIPIRRLR-GLWTGRHWVAI 160
BLAST of mRNA_L-elsbetiae_contig5092.13133.1 vs. uniprot
Match: A0A0A9DAQ8_ARUDO (Ubiquitinyl hydrolase 1 n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9DAQ8_ARUDO) HSP 1 Score: 61.2 bits (147), Expect = 1.560e-8 Identity = 43/138 (31.16%), Postives = 69/138 (50.00%), Query Frame = 1 Query: 1 MYHERQHLMHCAMHALNNLFQEAWA-DRTLMERLALELCDRDAAQRSESGTRRMLINPFKSVVPLVGDYDISVVIEALKLRECRVSLHVVFNPRDPSAFELALAEVDWESASIVGIIVNFVCRNLLWGAWVTHHFYAI 411 +YHERQ L C +HALNNL QE R ++R+ L D + + + P +VV G+YD++V+I AL+ R+ +V H + +D ++ ++VG+++N R L G W H+ AI Sbjct: 29 VYHERQRLQFCLLHALNNLMQEKECFTRAELDRIGGNLILSDP-NKDQWTPLSFIFKPHHNVV--TGNYDVNVLIAALEARKKKVVWH---------DHRKGASSIDLDAEAVVGLMINVPVRRLR-GLWTGRHWVAI 153 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5092.13133.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5092.13133.1 >prot_L-elsbetiae_contig5092.13133.1 ID=prot_L-elsbetiae_contig5092.13133.1|Name=mRNA_L-elsbetiae_contig5092.13133.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=159bp MYHERQHLMHCAMHALNNLFQEAWADRTLMERLALELCDRDAAQRSESGTback to top mRNA from alignment at L-elsbetiae_contig5092:11415..13170+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5092.13133.1 ID=mRNA_L-elsbetiae_contig5092.13133.1|Name=mRNA_L-elsbetiae_contig5092.13133.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1756bp|location=Sequence derived from alignment at L-elsbetiae_contig5092:11415..13170+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5092:11415..13170+ >mRNA_L-elsbetiae_contig5092.13133.1 ID=mRNA_L-elsbetiae_contig5092.13133.1|Name=mRNA_L-elsbetiae_contig5092.13133.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=954bp|location=Sequence derived from alignment at L-elsbetiae_contig5092:11415..13170+ (Laminarionema elsbetiae ELsaHSoW15)back to top |