prot_L-elsbetiae_contig5091.13132.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig5091.13132.1
Unique Name	prot_L-elsbetiae_contig5091.13132.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	308

Homology

[Close]

BLAST of mRNA_L-elsbetiae_contig5091.13132.1 vs. uniprot
Match: A0A6H5JY22_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY22_9PHAE)

HSP 1 Score: 153 bits (386), Expect = 9.400e-41
Identity = 85/193 (44.04%), Postives = 120/193 (62.18%), Query Frame = 0

Query:    1 MWKPDAVVPENRWRARVIWAGLLVSIAAYTVWQLWKIYDGYNNISTSLEVTDELYEFPHLTVCFSPNQGC---DEDTD-CAASALANSN-VALGEDSYEVASISSLDERCVGFDLASLNLKDKDMAPEDVQLVVSASWIVSQSAATDRGFFNHVIVLTSDGEPTLENISDLYVPFLRIIPSSEAVLTQTVAEL 188
            MWKPDAVVPE+RWRAR++W  LLV I AYT+W +WKI+D   N STSL++T++L+ +P++ VCF   QGC   D   D C ++AL  S  V   +DSY      +L   CV FDL SL   D D+  E+ ++ +   WI S  A+ +  +F+H+ +  ++ EPT    S L+VP+ RI+P  E + T  VAEL
Sbjct:    1 MWKPDAVVPEHRWRARMVWVSLLVGITAYTIWLIWKIFDDRANPSTSLKITNDLFAYPYVLVCFYHGQGCGFTDTSVDTCVSTALTESTTVYFKDDSYGDLGAYALGN-CVSFDLGSLEFGD-DITTENDEVTIDMWWIQSDMASDETDYFDHIGMYMAEEEPTESTSSFLHVPYSRILPDVEVIYT--VAEL 189

[Close]

BLAST of mRNA_L-elsbetiae_contig5091.13132.1 vs. uniprot
Match: D7FTW4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW4_ECTSI)

HSP 1 Score: 103 bits (258), Expect = 4.120e-23
Identity = 68/208 (32.69%), Postives = 96/208 (46.15%), Query Frame = 0

Query:   17 VIWAGLLVSIAAYTVWQLWKIYDGYNNISTSLEVTDELYEFPHLTVCFSPNQGC---DEDTD-CAASALANSNVALGEDSYEVASISSLDERCVGFDLASLNLKDKDMAPEDVQLVVSASWIVSQSAATDRGFFNHVIVLTSDGEPTLENISDLYVPFLRIIPSSEAVLTQTVAELTIGKTTKEALDGSVKTTYPPLVLSSTEYVDDN 220
            ++W  LLV I AYT+WQ+WKI+D   N S+SL++T++LY +PH+ VCF   +GC   DE  D C  +AL+ S        Y     +  +  CVGFDL SL   D D+  E+ Q ++                                                           TIGKTTK+ L+G V TT+PPLVLSS+++  +N
Sbjct:    1 MVWVSLLVCITAYTIWQIWKIFDDLANPSSSLKITNDLYAYPHVLVCFFHGEGCGFEDESVDVCVTTALSESTTVSFNGEYYDDLGAVTESNCVGFDLGSLEFGD-DITAENDQAIID----------------------------------------------------------TIGKTTKKKLNGDVTTTFPPLVLSSSDFTAEN 149

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig5091.13132.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig5091.13132.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5JY22_9PHAE	9.400e-41	44.04	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FTW4_ECTSI	4.120e-23	32.69	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001873	Epithelial sodium channel	PFAM	PF00858	ASC	coord: 10..63 e-value: 1.4E-6 score: 27.6
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 36..307
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 17..35
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..16
None	No IPR available	TMHMM	TMhelix		coord: 13..35

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig5091	contig	L-elsbetiae_contig5091:2318..8886 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig5091.13132.1	mRNA_L-elsbetiae_contig5091.13132.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig5091 1245..8963 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig5091.13132.1 ID=prot_L-elsbetiae_contig5091.13132.1|Name=mRNA_L-elsbetiae_contig5091.13132.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=308bp
MWKPDAVVPENRWRARVIWAGLLVSIAAYTVWQLWKIYDGYNNISTSLEV
TDELYEFPHLTVCFSPNQGCDEDTDCAASALANSNVALGEDSYEVASISS
LDERCVGFDLASLNLKDKDMAPEDVQLVVSASWIVSQSAATDRGFFNHVI
VLTSDGEPTLENISDLYVPFLRIIPSSEAVLTQTVAELTIGKTTKEALDG
SVKTTYPPLVLSSTEYVDDNPAGPGRLLRQYWGILGASDCLLGIVLHRNP
GRARPQAEGSRLRQDSPDRKGDPQTPEPFGGLAACFGLPGRGKAPMGVSL
PRHQPCR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001873	ENaC