mRNA_L-elsbetiae_contig5088.13126.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_L-elsbetiae_contig5088.13126.1
Unique Name	mRNA_L-elsbetiae_contig5088.13126.1
Type	mRNA
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)

Homology

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BLAST of mRNA_L-elsbetiae_contig5088.13126.1 vs. uniprot
Match: D7G7F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7F9_ECTSI)

HSP 1 Score: 131 bits (329), Expect = 9.930e-32
Identity = 70/142 (49.30%), Postives = 87/142 (61.27%), Query Frame = 2

Query:  251 MGFEGIRQCMDAFTVALNQACEGGEKRWYTSTLELQLASLALCSACRSVPTLHVRVRDQTPRTLWCRQTQNAQRHTRSFDVRIASRVPIVRAFGVKWELLIKVM-QNTAMEWWEGSLEIVSFGGHFNECISRVVWPASLRKL 673
            M  EG  +  DAF +AL+QACEGGEKRWYTST ELQL SL +C ACRS PTLHVRV   TP +LW   T  A  +T+S  VR+ SRVP+VRA  + W   ++ + Q  A+E W  S  +   G      +  VVWP  L +L
Sbjct:    1 MPTEGYTRSFDAFAIALSQACEGGEKRWYTSTTELQLGSLDICRACRSTPTLHVRVTGGTPTSLWSPPTVQALPNTQSSKVRVVSRVPVVRALRLTWAFSMETLVQRAAIELWSRSERLEMVGPLCAASLGSVVWPLGLTQL 142

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BLAST of mRNA_L-elsbetiae_contig5088.13126.1 vs. uniprot
Match: A0A6H5LIJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LIJ3_9PHAE)

HSP 1 Score: 132 bits (333), Expect = 1.250e-28
Identity = 70/144 (48.61%), Postives = 95/144 (65.97%), Query Frame = 2

Query:  257 FEGIRQCMDAFTVALNQACEGGEKRWYTSTLELQLASLALCSACRSVPTLHVRVRDQTPRTLWCRQTQNAQRHTRSFDVRIASRVPIVRAFGVKWELLIK-VMQNTAMEWWEGSLEIVSFGGHFNECIS----RVVWPASLRKL 673
             E   +C+DAF +AL+QACEGGEKRWY STLELQL SL LC ACR+   LHV V DQTPR+LW  +T   + +TRS+++ I+SRVP+VRA  + W L ++ +++  A+E W  S  +   G   + C+S     VVWP  L +L
Sbjct:    5 IEWRTRCLDAFVIALSQACEGGEKRWYASTLELQLTSLDLCRACRTTSILHVHVDDQTPRSLWSSRTAQTRPNTRSWNLHISSRVPVVRALRLTWALSMEALLRKAAIELWTWSERLELLG---SSCVSSLGSEVVWPRGLTQL 145

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BLAST of mRNA_L-elsbetiae_contig5088.13126.1 vs. uniprot
Match: A0A6H5KNI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNI6_9PHAE)

HSP 1 Score: 126 bits (316), Expect = 2.690e-26
Identity = 78/170 (45.88%), Postives = 99/170 (58.24%), Query Frame = 2

Query:  251 MGFEGIRQCMDAFTVALNQACEGGEKRWYTSTLELQLASLALCSACRSVPTLHVRVRDQTPRTLWCRQTQNAQRHTRSFDVRIASRVPIVRAFGVKWELLIKVMQN-TAMEWWEGS-------------LEIVSFGGHFNECI-------SRVVWPASLRKLSFG-GLNQ 694
            M  +G  +C+DAF VALNQAC+G EKRWY STLELQL SL +C ACR V TLHVRV+ QTP +LW     +   + RS  V I+SRVP+V+AFG+ W L + V+Q  +A E   GS             LE   +       +       +   WPASL++LSFG G NQ
Sbjct:    1 MTTKGNSKCLDAFVVALNQACDGQEKRWYVSTLELQLVSLEVCGACRRVQTLHVRVKPQTPPSLWFPSQNHTTTNNRSPKVCISSRVPVVQAFGLTWALPMGVLQQRSATEVRSGSGCRRANTHSSAASLESAVWPQRLKRMVFESDMTVNTASWPASLQQLSFGCGFNQ 170

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BLAST of mRNA_L-elsbetiae_contig5088.13126.1 vs. uniprot
Match: D7FTK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK8_ECTSI)

HSP 1 Score: 110 bits (276), Expect = 1.140e-23
Identity = 65/141 (46.10%), Postives = 81/141 (57.45%), Query Frame = 2

Query:  260 EGIRQCMDAFTVALNQACEGGEKRWYTSTLELQLASLALCSACRSVPTLHVRVRDQTPRTLWCRQTQNAQRHTRSFDVRIASRVPIVRAFGVKWEL-LIKVMQNTAMEWWEGSLEIVSFGGHFNECISRVVWPASLRKLSF 679
            EG    +D   VALNQAC+G EKRWY STLELQL SL LC ACRS   LHV VR+ TP TLW  +T       RS +V  ++RVP V+A    W L + ++ Q  A E    +   +  G  F   +  VVWP SL++L F
Sbjct:   84 EGGGSSLDTLIVALNQACDGQEKRWYVSTLELQLVSLELCGACRSAQLLHVFVREDTPPTLWSSRTSRTTPSQRSPEVCTSNRVPAVQALCWTWALPMDRLPQRAAAEPQPVTERRLQDGHSFAASVESVVWPESLKRLVF 224

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BLAST of mRNA_L-elsbetiae_contig5088.13126.1 vs. uniprot
Match: A0A6H5KLV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLV1_9PHAE)

HSP 1 Score: 114 bits (285), Expect = 1.420e-23
Identity = 72/162 (44.44%), Postives = 91/162 (56.17%), Query Frame = 2

Query:  263 GIRQCMDAFTVALNQACEGGEKRWYTSTLELQLASLALCSACRSVPTLHVRVRDQTPRTLWCRQTQNAQRHTRSFDVRIASRVPIVRAFGVKWELLIKVM-QNTAMEWWE--------GSLEIVSFGGHF--NECISRVV-----------WPASLRKLSFG 682
            G  +C+ AF VALNQ C G EKRWY STLELQL SL  C ACR VPTLHVRV  QTPR+LW     +A    RS +  +++RVP V+A G+ W L ++V+ Q +A+E           G+    S G  F     + R+V           WPASL +L FG
Sbjct:   13 GRSECLRAFIVALNQTCNGQEKRWYASTLELQLVSLEFCGACRRVPTLHVRVDRQTPRSLWSPCKSHATTKKRSREACVSNRVPAVQASGLTWALDMEVLLQTSAVELRSRSKYRRVSGNSSTASLGSMFWLQMMLKRLVFDSDMPASTASWPASLPQLLFG 174

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BLAST of mRNA_L-elsbetiae_contig5088.13126.1 vs. uniprot
Match: D7G0Z9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Z9_ECTSI)

HSP 1 Score: 97.1 bits (240), Expect = 3.930e-20
Identity = 47/74 (63.51%), Postives = 53/74 (71.62%), Query Frame = 2

Query:  272 QCMDAFTVALNQACEGGEKRWYTSTLELQLASLALCSACRSVPTLHVRVRDQTPRTLWCRQTQNAQRHTRSFDV 493
            +C+DAF VALNQ C+G EKRWY STLELQL SL  C ACR VPTLHVRV  +TPR+LW  +T     H RS  V
Sbjct:   40 KCLDAFVVALNQTCDGQEKRWYASTLELQLVSLEFCGACRHVPTLHVRVDRRTPRSLWSPRTTPITAHKRSRKV 113

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BLAST of mRNA_L-elsbetiae_contig5088.13126.1 vs. uniprot
Match: A0A6H5L1V9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1V9_9PHAE)

HSP 1 Score: 104 bits (259), Expect = 5.390e-20
Identity = 68/170 (40.00%), Postives = 88/170 (51.76%), Query Frame = 2

Query:  251 MGFEGIRQCMDAFTVALNQACEGGEKRWYTSTLELQLASLALCSACRSVPTLHVRVRDQTPRTLWCRQTQNAQRHTRSFDVRIASRVPIVRAFGVKW--------------------ELLIKVMQNTA----MEWWEGSLEIVSFGGHFNECISRVVWPASLRKLSFGGL 688
            M  E  R+C+DAF VAL+Q  EGGEKRWYTSTL+LQLASL  C ACRS P LHV V  +TP TLW     N    T       ++RVP V+A G+ W                     L ++V   TA    + W +G   +V     F   +  + WP+SL+ L+F G+
Sbjct:    1 MTSEAQRRCLDAFVVALSQCYEGGEKRWYTSTLQLQLASLEFCGACRSTPMLHVYVDAETPPTLWSLGQANPTAGT-------STRVPAVQAVGLTWARPTESPLGSASSELWTRLESLQLQVSLCTANLDSVVWPQGLQRLVMDCTVFIIPLEMMSWPSSLKSLTFAGI 163

[Close]

BLAST of mRNA_L-elsbetiae_contig5088.13126.1 vs. uniprot
Match: A0A6H5KVM8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVM8_9PHAE)

HSP 1 Score: 94.4 bits (233), Expect = 1.730e-19
Identity = 50/86 (58.14%), Postives = 59/86 (68.60%), Query Frame = 2

Query:  263 GIRQCMDAFTVALNQACEGGEKRWYTSTLELQLASLALCSACRSVPTLHVRVRDQTPRTLWCRQTQNAQRHTRSFDVRIASRVPIV 520
            G  QC DAF VAL+QACEGG KR YTSTLEL LASL +C A RS  TLHVRV+ QTPR+ W       +    S  +R++SRVP+V
Sbjct:   18 GPTQCFDAFVVALSQACEGGNKRSYTSTLELPLASLDICRAGRSTSTLHVRVQYQTPRSFWSPPKVQLRPDEGSSKIRLSSRVPVV 103

[Close]

BLAST of mRNA_L-elsbetiae_contig5088.13126.1 vs. uniprot
Match: A0A6H5KXX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXX4_9PHAE)

HSP 1 Score: 99.8 bits (247), Expect = 3.470e-18
Identity = 64/172 (37.21%), Postives = 87/172 (50.58%), Query Frame = 2

Query:  251 MGFEGIRQCMDAFTVALNQACEGGEKRWYTSTLELQLASLALCSACRSVPTLHVRVRDQTPRTLWCRQTQNAQRHTRS----------------------------FDVRIASRVPIVRAFGVKWELLIKVM-QNTAMEWWEGSLEIVSFGGHFNEC-ISRVVWPASLRKLS 676
            M  EG  +  DA  +A++QA EG  KRWYTSTLEL+LASL  C ACR VPT+HVRV   TP +LW       + HTRS                               RI+SRVP+ +A G+ W L  +++ Q  A+E W   LE +      +   +  V WP +L++L+
Sbjct:    1 MDSEGASRGFDALIIAISQAYEGRGKRWYTSTLELRLASLETCRACRRVPTIHVRVDANTPPSLWSPHAMPTRAHTRSSKTRAXXXXXXXXXXXXXXXXXXXXXXXXKARISSRVPVGQALGLTWALPTEILLQGVAVELWT-KLEFLQLRESLSPSDLVSVAWPQNLKRLA 171

[Close]

BLAST of mRNA_L-elsbetiae_contig5088.13126.1 vs. uniprot
Match: A0A6H5K8K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K9_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 1.740e-17
Identity = 63/170 (37.06%), Postives = 87/170 (51.18%), Query Frame = 2

Query:  263 GIRQCMDAFTVALNQACEGGEKRWYTSTLELQLASLALCSACRSVPTLHVRVRDQTPRTLWCRQTQNAQRHTRSFDVRIASRVPIVRAFGVKWELLIKVM---------------QNTA---------MEWWEGSLEIVSFGGHFNECISRVVWPASLRKLSFGGL-NQP 697
            G  +C+DAF VAL QA +G  KRWY STLELQL SL  C ACRS  +  V++  QTP +LW  +  +     RS +  I SRVP V+A G  W L ++++               Q T          M W++    ++ +       ++ V WPA L++LSFG   NQP
Sbjct:   25 GRSECLDAFIVALKQAGDGRAKRWYVSTLELQLVSLEFCGACRSALSFDVQIHRQTPHSLWSPRKSHGTLKKRSREACIPSRVPAVQANGWMWALPMEILLPRSATELHQVSENRQPTGPSSATSPGRMGWFQKLTRLMFYS---ERSVNSVSWPACLQELSFGDFFNQP 191

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig5088.13126.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig5088.13126.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G7F9_ECTSI	9.930e-32	49.30	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5LIJ3_9PHAE	1.250e-28	48.61	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KNI6_9PHAE	2.690e-26	45.88	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FTK8_ECTSI	1.140e-23	46.10	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KLV1_9PHAE	1.420e-23	44.44	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G0Z9_ECTSI	3.930e-20	63.51	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5L1V9_9PHAE	5.390e-20	40.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KVM8_9PHAE	1.730e-19	58.14	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KXX4_9PHAE	3.470e-18	37.21	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K8K9_9PHAE	1.740e-17	37.06	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig5088	contig	L-elsbetiae_contig5088:5819..11286 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Properties


Property Name	Value
Hectar predicted targeting category	other localisation
Exons	2
Model size	2304
Cds size	1287
Stop	1
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig5088.13126.1	prot_L-elsbetiae_contig5088.13126.1	Laminarionema elsbetiae ELsaHSoW15	polypeptide	L-elsbetiae_contig5088 6586..11036 -

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622816517.0341854-UTR-L-elsbetiae_contig5088:5818..6585	1622816517.0341854-UTR-L-elsbetiae_contig5088:5818..6585	Laminarionema elsbetiae ELsaHSoW15	UTR	L-elsbetiae_contig5088 5819..6585 -
1691683616.7699246-UTR-L-elsbetiae_contig5088:5818..6585	1691683616.7699246-UTR-L-elsbetiae_contig5088:5818..6585	Laminarionema elsbetiae ELsaHSoW15	UTR	L-elsbetiae_contig5088 5819..6585 -
1622816517.0712726-UTR-L-elsbetiae_contig5088:11036..11286	1622816517.0712726-UTR-L-elsbetiae_contig5088:11036..11286	Laminarionema elsbetiae ELsaHSoW15	UTR	L-elsbetiae_contig5088 11037..11286 -
1691683616.8019907-UTR-L-elsbetiae_contig5088:11036..11286	1691683616.8019907-UTR-L-elsbetiae_contig5088:11036..11286	Laminarionema elsbetiae ELsaHSoW15	UTR	L-elsbetiae_contig5088 11037..11286 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622816517.0491462-CDS-L-elsbetiae_contig5088:6585..7859	1622816517.0491462-CDS-L-elsbetiae_contig5088:6585..7859	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig5088 6586..7859 -
1691683616.7812037-CDS-L-elsbetiae_contig5088:6585..7859	1691683616.7812037-CDS-L-elsbetiae_contig5088:6585..7859	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig5088 6586..7859 -
1622816517.0596797-CDS-L-elsbetiae_contig5088:11023..11036	1622816517.0596797-CDS-L-elsbetiae_contig5088:11023..11036	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig5088 11024..11036 -
1691683616.791778-CDS-L-elsbetiae_contig5088:11023..11036	1691683616.791778-CDS-L-elsbetiae_contig5088:11023..11036	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig5088 11024..11036 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at L-elsbetiae_contig5088:5819..11286-
coding sequence from alignment at L-elsbetiae_contig5088:5819..11286-

protein sequence of mRNA_L-elsbetiae_contig5088.13126.1

>prot_L-elsbetiae_contig5088.13126.1 ID=prot_L-elsbetiae_contig5088.13126.1|Name=mRNA_L-elsbetiae_contig5088.13126.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=429bp
MGFEGIRQCMDAFTVALNQACEGGEKRWYTSTLELQLASLALCSACRSVP
TLHVRVRDQTPRTLWCRQTQNAQRHTRSFDVRIASRVPIVRAFGVKWELL
IKVMQNTAMEWWEGSLEIVSFGGHFNECISRVVWPASLRKLSFGGLNQPI
DGVMWPASLQHLSFAGEFNQPVKDVEWPHSLRQLSLGHCFNQPIDGVTWP
PSLQQLSFGAKFNHPIAGVLWPPSLQQISFGWDLNQSIVRVVWPAFLQSI
SFGWDFNQSIIGVVWPASLQQLSFGGQFNQSIIGVVWPASLLELSFGYFF
NQPIVGVIWPASLQCVSLGEYFNQPIVEVVWPVPLQKLSFGSDFNQPVAG
VVWPASLQQLSFGWDFNQPIAGAVWPVSLKCLSLGEEFNQPLAEVVWPAS
LQSVTRVVGRDDDNGEGYERGSKEISLL*

mRNA from alignment at L-elsbetiae_contig5088:5819..11286-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_L-elsbetiae_contig5088.13126.1 ID=mRNA_L-elsbetiae_contig5088.13126.1|Name=mRNA_L-elsbetiae_contig5088.13126.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5468bp|location=Sequence derived from alignment at L-elsbetiae_contig5088:5819..11286- (Laminarionema elsbetiae ELsaHSoW15)
TGCGCGGTCCAGCAGTCCGGCACGGCGAAGGTATATCGCGGCGCAGGCGA
CCGAGAGCCGGAGAGCCGGGGTGTGTCGCGTAATTCTGTTGTGAGAGAGG
ACGAGCGATTTTGCCATTCCCGAACCGCAGAGCATAGACAGGCATACGCG
GTGTCTTACTGCACTGCCTCTCTCCCCTCTCCCTTTTGGGAGGCGTGTAC
CGCGGCACAGCGAACTGGAGGCGGGGAAGGCACCCGAGAGCACATTACCA
ATGGGCTTCGAAGGTAAGAGGTTCGCGTGCGATGTTTGTTTTGAAAGGGC
TCATTGGTGAAACTTCGCATCGTACACGTAGTACCATCGAGGCAGACTCA
GGAGACTGATTCGGAGGTGAAGATGCTGAGATGGTTCGGGTATGCACGAA
ACAGTTAGAAGACTGATTCGGAGGTGAAGATGCTGAGATGGTTCGGGTAT
GCACAAAACAGTTAGACAAATGACACAGTTTGCGCATATGCATGTGGACG
TTCAATGGTTCTAGAATGACGTTATGACTAGATGACGTCATCGATGCGGG
ATAACTGCTGCATGACCGTTGATCGTTGATCACTTGAAGTAAGAGCTATC
GGTTACGAGATGGGCGATTATACTCAGTGCTGACGTGTGGTCGAGGTGCA
GGGACGGTTTCCGACCTACGACTTGATACGATCTAGTGGCTCAGGTCGCG
TGTGTGTCTCAAGGGCGCAACGGTAGCTAGTGGGAATTAGAGAGTATGTG
CGTGCGTGCCTGCGTACTCTAGCAAGTTGTAGCAAGTGTTATGTAACGGG
TTATACTCGGGAAAGCGACGACCCAGAGAGATGCAAGTGTGGGGTCGCGC
ATTCTCTCACTCTTCTTCTCTGCTGTTGCCCTTAGCCCGATAGCCTAGAA
AAGAGTCAATCAACAAAGAGATCTTCAAACCTTGACGAACCTATCAGAAC
TTAAAGACCAGAACCTCCAAGCTCCGAAGGGATACAAGACTCCTTTCCCC
TACATGCACGCGTCTCCGGAAATTTCAATCTGGAATTAACCTCCAATTAG
GCACACTGCTGTGCTCCTGTGTAGTCGGGAGGAATGTCCCATTTTTCGCC
CAACAGCAGTCCTGACAACGAATTCAGCCGTCATTCTCACCTCGGCACCA
TGCAGGATTCGTTTCAGGCACCTTCGGTATAACTTGGCGTATCGGACCGT
TGTCATGCCGTGGGTCTGTCTCTGAAAAGGGTGCTGTTTTTATTGCTGGG
GTACATAGGTGCGTTGCGTCTTTGTTGCAGCGCTCACTCACCCAACCTGC
AGACCTGGAAAATACCGTGAATACTCGCTTAGGGTACATATGGGCAAAAA
CGCGGTTGGAGCAGAAAGAGAGGCGCTCTCCCGTGGCAGAGAGAACTAAC
TGCCTACGCGGAGGCGCTGCACTACTACCTGCTGTATACAACACATAGCA
AAGGCTGTACATCCGCGTTTGTCACGAATTGCCCTAGCAACGGACTTGCC
TACAAGACAAGTCTATGCATGAGGTGTGCGACGGATACGTGCGTGTTGTA
GTACTTGATATGAAGGATCATCGGCGAGATACGCCCGCAGCCAAGGCTGT
GTTGTTGTACCTGTAGAGCGTGCGGCCGGTTAAGCCGCAGGTGTCCATCC
GTGCATACTGTTGTTGAGAGATACACGCTACGCTACAAGCATCCACTCGC
CACCAACAACGCGTAGCTCGAGTATATGCTCGACTAGGCCAACTCATTGT
CGCGGCGAGGTGGACTACCATCGGGACAGGGTGGTTCTCAAACAAAACAT
TTGTACAATATGAAATAAACAAAATACTTTCCCATACTATTTCCTAGTAG
TACGCCGGTAGAAAATATTCTACGAGCGAGTATTATATTGGCAAGATCTA
TGTCTTGAGGGTGGACCACGCAGCACAGCTTTGAAATCCTGGGTAGAGAT
TCCAGGAAAGAGCCCGAAGCGACACTTTGTTTTATTTTAAAGCGGTTCTT
TTTTGCCATCTCCCACATAAACTGCCGTAGACCTCTCTCCAGCTGCTCTA
TCTCGCCGCAAAATCGATTTTTGCGGTTTGGCATGATAACTGATACCAAA
CTTCCTCAGTCAGTCCTTGGGGTTGACTATCGTGAGATAGCTCTTACTGT
TAGTAGCAGAGCAGAGAGCAATATGTACCACGGTCGACCGTTTGAATCCT
AGTCTGACCGAGCAAACTACAATTTTGTGTGTCCGCAAGAGTGAGCGCAT
GTACACTGGGGTACGGCCATGGAGCGCTAGATACCTTTGGAGACATGATC
TTCGGCTGAGCATCCCTCATAAGAACCTCGGAGGGACATAGTCGGAGCAC
AGCACGAGCGGTGCACAATAGCTTTCGATCTGGAGGTTTTTGTGTTTTCA
AACCGTCTCAAAATGTCCAATTTTCTGTCAATTTGGTCGAGTTTTGTTGA
ACGGATAAAGGCATACACGCTTTGCAAACCAGCTCAAACAGCAGCCACGC
GAAGATAGCCAGGATGTTTCCCTTCAAGAAAATGGGGGTCAAGACAGTCA
ACCGGATTCCGACACCCATAGAAATTTTGGTGCCACACCCGTGTTCTTAT
TGTACTTATTTCAAAGAGGAAGAACTCAGAACCAGCAGTCTATTCCCCGC
AACTTCAACTACGTGGTCCATCCTTAAGAAATATATAGCTGTGTATGTAT
GTATGTGGTACAACAAAACCTACACATACTTTGGCGGTTTTCGTAGCAGC
TCTTCGTTAAGCGAGTGCCAAGATACATGAGAGTGGTGCGTGAATGTGTT
GAGATGCATATGTGTCGGATGGAGTTTGCCTTGTAGATTGACACCACGTT
TGTGTACATGAGGAAGAGCAGAAAACAGAACACAAGGTGAGAAATATCGA
GAGAAAAACCAAGATATTTAGAGAGAGTGAGAGAGTGGAAGCGTGTCGGC
GATAGACCAGCGACGCACAGTACGGAACCGATCGAAACCCGGCCTCTTGG
CCACAAATATGTAATTTTTGGAAGGAGCTCTACCAAGGCTCGAGAGAGCG
TTCTAGGCGCCTGTTTTTGACACATTTACACTCTGAAACCAAGCGAATAG
TGTGCTGCTCTGTCATAGACTGAGAGAAAATGATTGTCATGCGGGAAATG
ACTGACGCCCAGAAATGCCACAAGTGATATCGTTCGCCAGAAAGAAAGAC
TCTGTACAAACTACGAATTTTTCAATTGTGTTGGAAAACCTCTCCCTATT
CCCCAACACATACCTGACATCAGCACAAGCCCAACCTGAAGCAAACACAC
AATGCCGTATCGAATATTGTACAATGCTACGCCCTGTAAGCTTTAATATG
CGAGAAATTACGCCCATGTCAACTTGGTCGACTTTTTTTGCGCGGTCGGT
CGTACGCTCGACTGGATGCACTTCCAGGTATTCGCCAGTGCATGGACGCT
TTTACTGTTGCCTTGAATCAAGCATGTGAAGGAGGGGAGAAGCGTTGGTA
CACGTCTACACTGGAGTTACAGCTGGCGTCGCTGGCGCTCTGCAGTGCTT
GTAGGAGTGTCCCGACCTTGCATGTGCGTGTCCGTGATCAAACACCTCGC
ACCTTGTGGTGCCGCCAAACACAAAATGCGCAGCGGCACACGCGCAGCTT
TGATGTTCGTATCGCGAGTCGTGTGCCGATCGTGCGCGCGTTTGGTGTGA
AGTGGGAGCTTCTGATCAAGGTTATGCAAAATACAGCCATGGAATGGTGG
GAAGGGTCCCTAGAGATAGTATCGTTCGGTGGCCACTTCAACGAATGCAT
CTCTAGAGTTGTATGGCCGGCCTCCCTGCGGAAGCTATCGTTCGGGGGGC
TCAATCAGCCTATAGACGGAGTTATGTGGCCAGCCTCCCTGCAACACCTG
TCTTTCGCGGGCGAGTTCAACCAGCCGGTCAAGGACGTTGAGTGGCCGCA
TTCCCTGCGACAACTATCGCTCGGGCATTGCTTTAACCAGCCTATTGACG
GAGTGACGTGGCCGCCTTCATTGCAGCAATTATCGTTTGGAGCTAAGTTC
AACCATCCCATCGCTGGGGTCCTGTGGCCGCCTTCATTGCAACAAATATC
GTTCGGGTGGGACCTCAACCAGTCCATTGTCAGAGTTGTGTGGCCTGCCT
TCCTGCAAAGCATATCGTTCGGGTGGGACTTCAACCAGTCCATCATCGGA
GTTGTGTGGCCTGCCTCCCTGCAACAGCTGTCGTTCGGGGGCCAGTTCAA
CCAATCAATCATCGGAGTCGTGTGGCCAGCCTCCTTACTGGAGCTATCGT
TCGGGTATTTCTTCAACCAACCCATCGTCGGAGTGATATGGCCTGCCTCC
CTGCAGTGTGTGTCACTCGGGGAGTACTTCAACCAGCCAATCGTCGAAGT
TGTGTGGCCGGTTCCACTGCAGAAGCTGTCGTTTGGGAGCGATTTCAATC
AGCCTGTCGCTGGGGTGGTGTGGCCGGCTTCATTGCAGCAGCTGTCATTC
GGGTGGGACTTCAATCAGCCTATCGCTGGAGCTGTGTGGCCTGTTTCTCT
GAAGTGCCTATCGCTCGGGGAGGAGTTCAACCAGCCCCTCGCCGAGGTTG
TGTGGCCGGCTTCCCTTCAAAGTGTGACCCGTGTAGTGGGAAGGGACGAC
GACAATGGGGAGGGGTATGAGAGGGGATCCAAGGAAATCAGCCTGCTCTG
AAAGCTGGTTGGGGCCGTGTGTGGGATTATTTATGTAGTTCTCTCGCAGC
CTTTTTTGAGAAGTAGCGGTGTAGGATATGGCTGTATGTAGTTTCCACGC
CGAGCTGGCTCCTCGACGAACAGAACGGCGATGATCGAGAGGGCCGTGGA
GATTGTTTCTCACGAACCTTATTTCCTGTTGTCCTTGTTATTGCTGCGGT
ACATACACATCGTTCGGGGGAAACCGTGTAGCCAATGGCCAGGCGACAGC
TCGTCTGGGCAAAACGCTAGCCAGCCCATTGCCGAAGTTGCGCGTGGTTG
GTGTCACGTTTGTAGGAGGCATCGTTTGTGATTAGATTTAAAAGGTTTTG
TAGCCGGCTTCGCTGAAACAGCCGTGTCTCGGGGGGTCCACTTCAAGCAG
CCGATCGCGGAAGCCGCATGTGGCAGGCTTTCCTGGAACAGCCATTGTTC
GCGAAATACTAATCAACCCGTTGATGGGGTTGACTCGCTTATCGTGGAAA
TGTTTATTGTTGAAGGGCTCACAGCTTTCTTGCCCACGCCGACTCGAAAA
ACCTACGTAGGTCGTACATACTAAGGCGCTCAAGCACTTGGCTATAGACC
AACACCTGAATGTGTCCTTCGGCCTCCCTAATATAAGTTCATGTCCACAA
CCGTTAACAAGGCCGAGCGGGTACAAAGCCTCATCCTTTAGAGGGTTGTT
AAGGATGGACAACGTGCTTGGAGTTCCGGGATAGATTGCTGGTGCTAAAG
TACTCTTATTTAAAATCG

Coding sequence (CDS) from alignment at L-elsbetiae_contig5088:5819..11286-

>mRNA_L-elsbetiae_contig5088.13126.1 ID=mRNA_L-elsbetiae_contig5088.13126.1|Name=mRNA_L-elsbetiae_contig5088.13126.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2574bp|location=Sequence derived from alignment at L-elsbetiae_contig5088:5819..11286- (Laminarionema elsbetiae ELsaHSoW15)
ATGGGCTTCGAAGATGGGCTTCGAAGGTATTCGCCAGTGCATGGACGCTT
TTACTGTTGCCTTGAATCAAGCATGTGAAGGAGGGGAGAAGCGTTGGTAC
ACGTCTACACTGGAGTTACAGCTGGCGTCGCTGGCGCTCTGCAGTGCTTG
TAGGAGTGTCCCGACCTTGCATGTGCGTGTCCGTGATCAAACACCTCGCA
CCTTGTGGTGCCGCCAAACACAAAATGCGCAGCGGCACACGCGCAGCTTT
GATGTTCGTATCGCGAGTCGTGTGCCGATCGTGCGCGCGTTTGGTGTGAA
GTGGGAGCTTCTGATCAAGGTTATGCAAAATACAGCCATGGAATGGTGGG
AAGGGTCCCTAGAGATAGTATCGTTCGGTGGCCACTTCAACGAATGCATC
TCTAGAGTTGTATGGCCGGCCTCCCTGCGGAAGCTATCGTTCGGGGGGCT
CAATCAGCCTATAGACGGAGTTATGTGGCCAGCCTCCCTGCAACACCTGT
CTTTCGCGGGCGAGTTCAACCAGCCGGTCAAGGACGTTGAGTGGCCGCAT
TCCCTGCGACAACTATCGCTCGGGCATTGCTTTAACCAGCCTATTGACGG
AGTGACGTGGCCGCCTTCATTGCAGCAATTATCGTTTGGAGCTAAGTTCA
ACCATCCCATCGCTGGGGTCCTGTGGCCGCCTTCATTGCAACAAATATCG
TTCGGGTGGGACCTCAACCAGTCCATTGTCAGAGTTGTGTGGCCTGCCTT
CCTGCAAAGCATATCGTTCGGGTGGGACTTCAACCAGTCCATCATCGGAG
TTGTGTGGCCTGCCTCCCTGCAACAGCTGTCGTTCGGGGGCCAGTTCAAC
CAATCAATCATCGGAGTCGTGTGGCCAGCCTCCTTACTGGAGCTATCGTT
CGGGTATTTCTTCAACCAACCCATCGTCGGAGTGATATGGCCTGCCTCCC
TGCAGTGTGTGTCACTCGGGGAGTACTTCAACCAGCCAATCGTCGAAGTT
GTGTGGCCGGTTCCACTGCAGAAGCTGTCGTTTGGGAGCGATTTCAATCA
GCCTGTCGCTGGGGTGGTGTGGCCGGCTTCATTGCAGCAGCTGTCATTCG
GGTGGGACTTCAATCAGCCTATCGCTGGAGCTGTGTGGCCTGTTTCTCTG
AAGTGCCTATCGCTCGGGGAGGAGTTCAACCAGCCCCTCGCCGAGGTTGT
GTGGCCGGCTTCCCTTCAAAGTGTGACCCGTGTAGTGGGAAGGGACGACG
ACAATGGGGAGGGGTATGAGAGGGGATCCAAGGAAATCAGCCTGCTCTGA
GTATTCGCCAGTGCATGGACGCTTTTACTGTTGCCTTGAATCAAGCATGT
GAAGGAGGGGAGAAGCGTTGGTACACGTCTACACTGGAGTTACAGCTGGC
GTCGCTGGCGCTCTGCAGTGCTTGTAGGAGTGTCCCGACCTTGCATGTGC
GTGTCCGTGATCAAACACCTCGCACCTTGTGGTGCCGCCAAACACAAAAT
GCGCAGCGGCACACGCGCAGCTTTGATGTTCGTATCGCGAGTCGTGTGCC
GATCGTGCGCGCGTTTGGTGTGAAGTGGGAGCTTCTGATCAAGGTTATGC
AAAATACAGCCATGGAATGGTGGGAAGGGTCCCTAGAGATAGTATCGTTC
GGTGGCCACTTCAACGAATGCATCTCTAGAGTTGTATGGCCGGCCTCCCT
GCGGAAGCTATCGTTCGGGGGGCTCAATCAGCCTATAGACGGAGTTATGT
GGCCAGCCTCCCTGCAACACCTGTCTTTCGCGGGCGAGTTCAACCAGCCG
GTCAAGGACGTTGAGTGGCCGCATTCCCTGCGACAACTATCGCTCGGGCA
TTGCTTTAACCAGCCTATTGACGGAGTGACGTGGCCGCCTTCATTGCAGC
AATTATCGTTTGGAGCTAAGTTCAACCATCCCATCGCTGGGGTCCTGTGG
CCGCCTTCATTGCAACAAATATCGTTCGGGTGGGACCTCAACCAGTCCAT
TGTCAGAGTTGTGTGGCCTGCCTTCCTGCAAAGCATATCGTTCGGGTGGG
ACTTCAACCAGTCCATCATCGGAGTTGTGTGGCCTGCCTCCCTGCAACAG
CTGTCGTTCGGGGGCCAGTTCAACCAATCAATCATCGGAGTCGTGTGGCC
AGCCTCCTTACTGGAGCTATCGTTCGGGTATTTCTTCAACCAACCCATCG
TCGGAGTGATATGGCCTGCCTCCCTGCAGTGTGTGTCACTCGGGGAGTAC
TTCAACCAGCCAATCGTCGAAGTTGTGTGGCCGGTTCCACTGCAGAAGCT
GTCGTTTGGGAGCGATTTCAATCAGCCTGTCGCTGGGGTGGTGTGGCCGG
CTTCATTGCAGCAGCTGTCATTCGGGTGGGACTTCAATCAGCCTATCGCT
GGAGCTGTGTGGCCTGTTTCTCTGAAGTGCCTATCGCTCGGGGAGGAGTT
CAACCAGCCCCTCGCCGAGGTTGTGTGGCCGGCTTCCCTTCAAAGTGTGA
CCCGTGTAGTGGGAAGGGACGACGACAATGGGGAGGGGTATGAGAGGGGA
TCCAAGGAAATCAGCCTGCTCTGA