prot_L-elsbetiae_contig5086.13123.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5086.13123.1
Unique Nameprot_L-elsbetiae_contig5086.13123.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length223
Homology
BLAST of mRNA_L-elsbetiae_contig5086.13123.1 vs. uniprot
Match: D7FJP9_ECTSI (Rab8D, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJP9_ECTSI)

HSP 1 Score: 399 bits (1026), Expect = 4.990e-140
Identity = 204/223 (91.48%), Postives = 210/223 (94.17%), Query Frame = 0
Query:    1 MNGL-APAAAGGAKPTPLLIRILMIGDSSVGKTSLVLRYDKRGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQGREVAREEGEQLAAELGVPYMETSAKDNLNVEETFGDLASRVKTRLEVTQAATDAASTGETLRLNGNRNGAGETDSLAQKMESCCT 222
            MNGL APA  G  KPTPLLIRILMIGDSSVGKTSLVLRYDKRGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQGREVAREEGEQLAAELGVPYMETSAK+NLNVEETFG+LASRVKTRLE +QAATD A  GETLRLNG RNG  +T+SL Q+MESCCT
Sbjct:    1 MNGLGAPAVGGAGKPTPLLIRILMIGDSSVGKTSLVLRYDKRGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQGREVAREEGEQLAAELGVPYMETSAKENLNVEETFGNLASRVKTRLEASQAATDGAGAGETLRLNGGRNGGVDTESLTQRMESCCT 223          
BLAST of mRNA_L-elsbetiae_contig5086.13123.1 vs. uniprot
Match: A0A835YM14_9STRA (Rab8D, rab family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM14_9STRA)

HSP 1 Score: 249 bits (637), Expect = 6.570e-81
Identity = 131/205 (63.90%), Postives = 156/205 (76.10%), Query Frame = 0
Query:   17 LLIRILMIGDSSVGKTSLVLRYDKRGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQGREVAREEGEQLAAELGVPYMETSAKDNLNVEETFGDLASRVKTRLEVTQAATDAASTGETLRLNGNRNGAGETDSLAQKMESCC 221
            LLIR+LMIG+SSVGKTSLVLRYDKRGFN +FTTTIGVDYSDR+L +D R VKLQIWDTAGQERFHSLTTSFFKRAEGF LV+DVS+R+SF++V+ WM DI EQGK  SDVV+ GNKCD++ R VA+ E E+LA    VPY E SAKDN+NV+  F  LAS VK RL+  +AA +A    ET+ L         T +  +K  +CC
Sbjct:   22 LLIRVLMIGESSVGKTSLVLRYDKRGFNAKFTTTIGVDYSDRMLTVDARAVKLQIWDTAGQERFHSLTTSFFKRAEGFALVFDVSDRRSFDAVARWMGDIREQGKADSDVVLVGNKCDVKERAVAKGEAEKLAKHFAVPYFEASAKDNVNVDVIFETLASSVKRRLDA-KAADEAKKASETVTLG--------TAAEPKKKSACC 217          
BLAST of mRNA_L-elsbetiae_contig5086.13123.1 vs. uniprot
Match: A0A836CM00_9STRA (Rab8D, rab family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM00_9STRA)

HSP 1 Score: 235 bits (600), Expect = 1.280e-75
Identity = 114/165 (69.09%), Postives = 137/165 (83.03%), Query Frame = 0
Query:   23 MIGDSSVGKTSLVLRYDKRGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQGREVAREEGEQLAAELGVPYMETSAKDNLNVEETFGDLASRVKTRLEVTQA 187
            MIG+SSVGKTSLVLRYDKRGFN +FTTTIGVDYSDR+L +DG+Q+KLQIWDTAGQERFHSLTTSFFKRAEGFVL +DVS+R SFESV+ WMKDI   GK  SDVV+ GNKCD++ R VA+EE + LAA+  VPY E SAK+++NV+  F  +A+ +K RL+   A
Sbjct:    1 MIGESSVGKTSLVLRYDKRGFNSKFTTTIGVDYSDRMLTIDGKQIKLQIWDTAGQERFHSLTTSFFKRAEGFVLCFDVSDRASFESVARWMKDIEASGKPDSDVVLVGNKCDMKERAVAKEEAQALAAQFRVPYFEASAKEDVNVDAVFSTVANNIKRRLDAKAA 165          
BLAST of mRNA_L-elsbetiae_contig5086.13123.1 vs. uniprot
Match: A0A6V1KKE1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1KKE1_HETAK)

HSP 1 Score: 207 bits (527), Expect = 2.560e-64
Identity = 105/197 (53.30%), Postives = 142/197 (72.08%), Query Frame = 0
Query:   12 AKPTPLLIRILMIGDSSVGKTSLVLRYDKRGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQG--REVAREEGEQLAAELGVPYMETSAKDNLNVEETFGDLASRVKTRLEVTQAATDAASTGETLRLNGNRNG 206
            +K  P +IRILM+GDSSVGKTSLV+R+D +GF  ++ TTIGVDYSDRL+E+DG + KLQ+WDTAGQERF +LT+SFFKRA+GF L YD+S+R SF++V+ WMKDI EQ   G ++++ GNKCD+    REVA +EG  LA E G P++E SAK + NV++ F  +AS V  +       +  A T + + L  +R G
Sbjct:    7 SKKQPPIIRILMVGDSSVGKTSLVMRFDDKGFLNKYATTIGVDYSDRLVEVDGDEYKLQVWDTAGQERFRALTSSFFKRADGFCLCYDISSRHSFDNVNRWMKDICEQAPSGFNLILVGNKCDVPEARREVAYQEGVDLAGEFGAPFLEASAKTDRNVDDVFMTVASAVVAQKS---GGSRGAGTRQNINLPSSRGG 200          
BLAST of mRNA_L-elsbetiae_contig5086.13123.1 vs. uniprot
Match: A0A7S2AY15_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AY15_9STRA)

HSP 1 Score: 197 bits (502), Expect = 1.100e-60
Identity = 97/166 (58.43%), Postives = 124/166 (74.70%), Query Frame = 0
Query:   18 LIRILMIGDSSVGKTSLVLRYDKRGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQG--REVAREEGEQLAAELGVPYMETSAKDNLNVEETFGDLASRVKTR 181
            ++RILMIGDS VGKTSLVLRYD+  F+ +F TTIGVDY D++++++G+ VKLQIWDTAGQERF SLT++FF RA+G VL YDVS+R S+E + TWM +I +      DVVICG+KCD+    R+V  EEG+ LA + GVPY E SAK N NVE  F  LA+ +  R
Sbjct:   18 VVRILMIGDSGVGKTSLVLRYDEDAFSHKFVTTIGVDYRDKVVQVNGKSVKLQIWDTAGQERFRSLTSNFFSRADGMVLAYDVSDRTSYEHIKTWMSEIRKHAPEDVDVVICGSKCDIDATDRKVTEEEGQTLAEDEGVPYFEASAKANTNVEAMFMQLATTIVDR 183          
BLAST of mRNA_L-elsbetiae_contig5086.13123.1 vs. uniprot
Match: A0A7S2SVP5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVP5_9STRA)

HSP 1 Score: 193 bits (490), Expect = 9.940e-59
Identity = 98/173 (56.65%), Postives = 125/173 (72.25%), Query Frame = 0
Query:    8 AAGGAKPTPLLIRILMIGDSSVGKTSLVLRYDKRGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDL--QGREVAREEGEQLAAELGVPYMETSAKDNLNVEETFGDLASRV 178
            AA  A P   ++R+LMIGDS+VGKTSLVLRYD+  F+ +F TTIGVDY D+++++ G  VKLQIWDTAGQERF +LT +FF RA+G VL YDVS R SFE V  W + IVE+      +++CG KCD   + REV++E+GE LA EL +P+ ETSAK N NV E F  LA+ V
Sbjct:    2 AAAMATPKRKVVRLLMIGDSNVGKTSLVLRYDENRFSHKFVTTIGVDYRDKVVDIHGANVKLQIWDTAGQERFRALTANFFSRADGIVLAYDVSKRTSFEGVRRWHEQIVEKAAPEVQMLLCGTKCDCSPEEREVSQEDGESLAKELAIPFFETSAKGNRNVAEAFMTLATAV 174          
BLAST of mRNA_L-elsbetiae_contig5086.13123.1 vs. uniprot
Match: A0A7S4JU42_9STRA (Hypothetical protein (Fragment) n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JU42_9STRA)

HSP 1 Score: 191 bits (485), Expect = 4.700e-58
Identity = 103/194 (53.09%), Postives = 131/194 (67.53%), Query Frame = 0
Query:    2 NGLAPAAAGGAK-----PTPL--------LIRILMIGDSSVGKTSLVLRYDKRGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQG-REVAREEGEQLAAELGVPYMETSAKDNLNVEETFGDLASRVKTR 181
            NG +P   GGA      P PL        ++R+LM+GDSS GKTSLVLR+D+  F+ +F TTIGVDY D+ + ++G  ++LQ+WDTAGQERF SLT++FF RA+GFVL YDVSNR SF+ V  WM+DI  +     DVV+CGNK DL   R V+ EEG  LA E GV + ETSA    NVE+ F DLA+ +K R
Sbjct:    4 NGSSPPGQGGAAAANPPPRPLQMGAKGAYIVRLLMVGDSSCGKTSLVLRFDQNVFSTKFVTTIGVDYRDKTVRIEGAPLRLQLWDTAGQERFRSLTSNFFGRADGFVLCYDVSNRPSFDHVHGWMRDIRTRAPPDCDVVLCGNKSDLDADRVVSTEEGAALAEECGVRFFETSALTGNNVEDMFMDLATAIKRR 197          
BLAST of mRNA_L-elsbetiae_contig5086.13123.1 vs. uniprot
Match: A0A6S9AIZ9_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9AIZ9_9STRA)

HSP 1 Score: 191 bits (484), Expect = 1.850e-57
Identity = 111/238 (46.64%), Postives = 151/238 (63.45%), Query Frame = 0
Query:    1 MNGLAPAAAGGAKPTPL--------LIRILMIGDSSVGKTSLVLRYDKRGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQG-REVAREEGEQLAAELGVPYMETSAKDNLNVEETFGDLASRVK-TRLEVTQAA------TDAASTG-ETLRLNGNRNGAGETDSLAQKMESCC 221
            M+G     A  A P PL        ++R+LM+GDSS GKTSLVLR+D+  F+ +F TTIGVDY D++++++G  ++LQ+WDTAGQERF SLT++FF RA+GFVL YD+SNR SF+ V  WM+DI  +     D+V+CGNK DL   R V  EEG+ LA E GV + E+SA    NVE  F  LA+ +K  R++  +AA       DA++ G  T+ L G    AGET +    +  CC
Sbjct:    1 MSGPGVEQAPPAAPRPLQMGAKGAYIVRLLMVGDSSCGKTSLVLRFDQNVFSTKFVTTIGVDYRDKMVKIEGAPMRLQLWDTAGQERFRSLTSNFFGRADGFVLCYDISNRPSFDHVIGWMRDIKTRAPPDCDIVLCGNKSDLDADRVVQTEEGKMLAEEYGVQFFESSALTGHNVEGMFTSLATTIKHRRIDEYEAAGGGSVANDASARGGHTVELGGAA--AGETGAPKGALSGCC 236          
BLAST of mRNA_L-elsbetiae_contig5086.13123.1 vs. uniprot
Match: A0A1E7F4E5_9STRA (Ras-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F4E5_9STRA)

HSP 1 Score: 190 bits (483), Expect = 2.880e-57
Identity = 103/218 (47.25%), Postives = 142/218 (65.14%), Query Frame = 0
Query:   18 LIRILMIGDSSVGKTSLVLRYDKRGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQG-REVAREEGEQLAAELGVPYMETSAKDNLNVEETFGDLASRVKTR----LEVTQAATDAASTGETLRLNGNRNGAGETDSL----AQKMES-----CC 221
            ++R+LM+GDSS GKTSLVLR+D+  F+ +F TTIGVDY D++++++G  ++LQ+WDTAGQERF SLT++FF RA+GFVL YD+SNR SF+ V  WM+DI  +     D+V+CGNK DL   R V  EEG+QLA E GV + ETSA   +NVE+ F  L++ +K +     E       A+  G +    G+ NG G T  +    AQ  E+     CC
Sbjct:   22 IVRLLMVGDSSCGKTSLVLRFDQNVFSTKFVTTIGVDYRDKMVKIEGVPMRLQLWDTAGQERFRSLTSNFFGRADGFVLTYDISNRPSFDHVIGWMRDIKTRAPPDCDIVLCGNKSDLDNDRVVTLEEGKQLAEEYGVEFFETSALTGINVEKMFYGLSTTIKRKRIDEFEAGGNGNSASGGGASTAEQGSVNGGGATQPVNLGAAQATENTPKSGCC 239          
BLAST of mRNA_L-elsbetiae_contig5086.13123.1 vs. uniprot
Match: A0A1Z5K1V2_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K1V2_FISSO)

HSP 1 Score: 188 bits (478), Expect = 8.080e-57
Identity = 104/214 (48.60%), Postives = 140/214 (65.42%), Query Frame = 0
Query:   18 LIRILMIGDSSVGKTSLVLRYDKRGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQG-REVAREEGEQLAAELGVPYMETSAKDNLNVEETFGDLASRVKTR-----LEVTQA-ATDAAST---GETLRLNGNRNGAGETDSLAQKMESCC 221
            ++R+LM+GDS+ GKTSLVLR+D+  F+ +F TTIGVDY D++++++G  ++LQ+WDTAGQERF SLT++FF RA+GFVL YD+SNR SF+ V  WM+DI  +     D+V+CGNKCDL   R V  EEG+QLA E GV + E+SA    NVE  F  LA+ +K +     LE   A +TD AST     T+ L     G       + K   CC
Sbjct:    8 IVRLLMVGDSACGKTSLVLRFDQNVFSTKFVTTIGVDYRDKMVKIEGAPMRLQLWDTAGQERFRSLTSNFFGRADGFVLTYDISNRPSFDHVIGWMRDIKTRAPPDCDIVLCGNKCDLDNDRVVTYEEGKQLADEYGVQFFESSALTGQNVESMFTALATTIKHKRIDDYLEGGGAPSTDGASTTTDNRTIHLAPTEGGG------SSKSPGCC 215          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5086.13123.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJP9_ECTSI4.990e-14091.48Rab8D, RAB family GTPase n=2 Tax=Ectocarpus TaxID=... [more]
A0A835YM14_9STRA6.570e-8163.90Rab8D, rab family GTPase n=1 Tax=Tribonema minus T... [more]
A0A836CM00_9STRA1.280e-7569.09Rab8D, rab family GTPase n=1 Tax=Tribonema minus T... [more]
A0A6V1KKE1_HETAK2.560e-6453.30Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2AY15_9STRA1.100e-6058.43Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S2SVP5_9STRA9.940e-5956.65Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S4JU42_9STRA4.700e-5853.09Hypothetical protein (Fragment) n=2 Tax=Odontella ... [more]
A0A6S9AIZ9_9STRA1.850e-5746.64Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A1E7F4E5_9STRA2.880e-5747.25Ras-domain-containing protein n=1 Tax=Fragilariops... [more]
A0A1Z5K1V2_FISSO8.080e-5748.60Uncharacterized protein n=1 Tax=Fistulifera solari... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 60..82
score: 54.09
coord: 122..135
score: 38.92
coord: 156..178
score: 40.75
coord: 19..40
score: 39.13
coord: 42..58
score: 29.26
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 19..181
e-value: 4.2E-75
score: 265.5
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 21..182
e-value: 1.1E-10
score: 17.5
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 20..181
e-value: 3.4E-35
score: 132.9
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 24..222
e-value: 9.8E-8
score: 41.7
NoneNo IPR availableGENE3D3.40.50.300coord: 13..210
e-value: 9.0E-60
score: 203.4
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 11..180
NoneNo IPR availablePANTHERPTHR24073:SF10coord: 11..180
NoneNo IPR availablePROSITEPS51419RABcoord: 13..221
score: 30.494
IPR001806Small GTPasePFAMPF00071Rascoord: 20..179
e-value: 2.2E-55
score: 186.7
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 19..172
e-value: 1.1E-26
score: 91.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 16..182

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5086contigL-elsbetiae_contig5086:391..7565 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5086.13123.1mRNA_L-elsbetiae_contig5086.13123.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5086 362..7816 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5086.13123.1 ID=prot_L-elsbetiae_contig5086.13123.1|Name=mRNA_L-elsbetiae_contig5086.13123.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=223bp
MNGLAPAAAGGAKPTPLLIRILMIGDSSVGKTSLVLRYDKRGFNLRFTTT
IGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDV
SNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQGREVAREEGEQLAA
ELGVPYMETSAKDNLNVEETFGDLASRVKTRLEVTQAATDAASTGETLRL
NGNRNGAGETDSLAQKMESCCT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase